| Genome information | |
|---|---|
| Genome ID | UHGV-0001180 |
| vOTU ID | vOTU-000157 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-A-D_F_2_1628__NODE_697_length_81314_cov_47.502370_1 |
| BioSample | SAMEA4765908 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 89.56% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 19 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9819 |
| Virus hallmark genes (geNomad) | 12 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 36.27 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 48,982 bps |
| GC content | 58.92% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 72 |
| CDS density | 94.53% |
| Average CDS length | 646.33 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |