| Genome information | |
|---|---|
| Genome ID | UHGV-0002177 |
| vOTU ID | vOTU-008642 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-E-H_E_14_1852__NODE_278_length_74765_cov_16.881869_1 |
| BioSample | SAMEA4766074 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 75.63% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9799 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 6.89 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 49,228 bps |
| GC content | 51.88% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 27 |
| CDS density | 93.80% |
| Average CDS length | 1,713.00 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |