| Genome information | |
|---|---|
| Genome ID | UHGV-0008312 |
| vOTU ID | vOTU-001101 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Nepal_MoBio_Fiber-Hadza-Nepal_D_17_CHE1007SZ__NODE_2253_length_36076_cov_4.191061_1 |
| BioSample | SAMEA4969130 |
| Country | Nepal |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 82.76% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 8 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9754 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 0.6 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 34,235 bps |
| GC content | 35.72% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 34 |
| CDS density | 96.08% |
| Average CDS length | 972.88 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |