| Genome information | |
|---|---|
| Genome ID | UHGV-0009543 |
| vOTU ID | vOTU-002233 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Nepal_MoBio_Fiber-Hadza-Nepal_B_17_RAU1026YZ__NODE_329_length_57778_cov_6.024644_1 |
| BioSample | NA |
| Country | Nepal |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 84.91% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 29 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9783 |
| Virus hallmark genes (geNomad) | 12 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 50.46 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 54,883 bps |
| GC content | 52.32% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 89 |
| CDS density | 94.67% |
| Average CDS length | 587.90 bps |
| tRNA count | 3 |
| Suppressor tRNA genes | 0 |