| Genome information | |
|---|---|
| Genome ID | UHGV-0016086 |
| vOTU ID | vOTU-005770 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-A-D_N_23_1513__NODE_173_length_107686_cov_16.392384 |
| BioSample | NA |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 59.77% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 27 |
| CheckV host markers | 2 |
| Recoded stop codon | Yes |
| Viral signal | |
|---|---|
| geNomad score | 0.9715 |
| Virus hallmark genes (geNomad) | 9 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -5.87 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 107,686 bps |
| GC content | 32.80% |
| Genetic code | The mold, protozoan, and coelenterate mitochondrial code and the mycoplasma/spiroplasma code (4) |
| CDS count | 101 |
| CDS density | 89.54% |
| Average CDS length | 956.44 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |