| Genome information | |
|---|---|
| Genome ID | UHGV-0016772 |
| vOTU ID | vOTU-011872 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-A-D_J_18_1660__NODE_1950_length_43539_cov_6.974253 |
| BioSample | SAMEA4765940 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 66.64% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 17 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9741 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -2.04 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 43,539 bps |
| GC content | 39.50% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 80 |
| CDS density | 89.24% |
| Average CDS length | 488.14 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |