| Genome information | |
|---|---|
| Genome ID | UHGV-0022317 |
| vOTU ID | vOTU-000424 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-E-H_G_5_1733__NODE_311_length_139382_cov_7.696113 |
| BioSample | NA |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 71.92% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 27 |
| CheckV host markers | 5 |
| Recoded stop codon | Yes |
| Viral signal | |
|---|---|
| geNomad score | 0.9763 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | -5.72 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 139,382 bps |
| GC content | 33.34% |
| Genetic code | Blepharisma nuclear code (15) |
| CDS count | 180 |
| CDS density | 84.13% |
| Average CDS length | 653.20 bps |
| tRNA count | 18 |
| Suppressor tRNA genes | 1 |