| Genome information | |
|---|---|
| Genome ID | UHGV-0023994 |
| vOTU ID | vOTU-000755 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-E-H_G_21_1740__NODE_548_length_80387_cov_8.704022 |
| BioSample | SAMEA4766020 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 54.72% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 18 |
| CheckV host markers | 2 |
| Recoded stop codon | Yes |
| Viral signal | |
|---|---|
| geNomad score | 0.9808 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 0.08 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 80,387 bps |
| GC content | 40.30% |
| Genetic code | Blepharisma nuclear code (15) |
| CDS count | 89 |
| CDS density | 80.95% |
| Average CDS length | 733.82 bps |
| tRNA count | 29 |
| Suppressor tRNA genes | 1 |