| Genome information | |
|---|---|
| Genome ID | UHGV-0028390 |
| vOTU ID | vOTU-001190 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_MoBio_hadza-I-L_K_14_2624__NODE_1999_length_49662_cov_27.380599 |
| BioSample | SAMEA4766370 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 50.50% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9729 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -5.56 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 49,662 bps |
| GC content | 45.95% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 51 |
| CDS density | 85.43% |
| Average CDS length | 835.06 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |