| Genome information | |
|---|---|
| Genome ID | UHGV-0028754 |
| vOTU ID | vOTU-042735 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_PheChl_Fiber-Hadza-Nepal_A_24_1660__NODE_4373_length_29223_cov_7.563439 |
| BioSample | SAMEA4765940 |
| Country | Tanzania |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 62.79% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 2 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9688 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 2.63 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 29,223 bps |
| GC content | 43.68% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 25 |
| CDS density | 96.31% |
| Average CDS length | 1,127.88 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |