| Genome information | |
|---|---|
| Genome ID | UHGV-0031303 |
| vOTU ID | vOTU-034552 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Hadza_PheChl_Fiber-Hadza-Nepal_A_2_1112__NODE_3008_length_48061_cov_123.616664 |
| BioSample | NA |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 64.43% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 11 |
| CheckV host markers | 3 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9777 |
| Virus hallmark genes (geNomad) | 6 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 4.9 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 48,061 bps |
| GC content | 40.12% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 71 |
| CDS density | 84.40% |
| Average CDS length | 573.42 bps |
| tRNA count | 2 |
| Suppressor tRNA genes | 0 |