| Genome information | |
|---|---|
| Genome ID | UHGV-0040070 |
| vOTU ID | vOTU-000195 |
| vOTU representative | No |
| Source dataset | Hadza |
| Original genome ID | Nepal_MoBio_Fiber-Hadza-Nepal_D_17_CHE1007SZ__NODE_681_length_79113_cov_4.695253 |
| BioSample | SAMEA4969130 |
| Country | Nepal |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 53.82% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 18 |
| CheckV host markers | 2 |
| Recoded stop codon | Yes |
| Viral signal | |
|---|---|
| geNomad score | 0.9799 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 1.88 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 79,113 bps |
| GC content | 39.40% |
| Genetic code | Blepharisma nuclear code (15) |
| CDS count | 90 |
| CDS density | 81.16% |
| Average CDS length | 715.43 bps |
| tRNA count | 16 |
| Suppressor tRNA genes | 1 |