UHGV-0056467

Genome information

Genome length 119,692 bps

CDS count 135

Completeness 79.39% (medium-quality)

geNomad score 0.9793

Prediction confidence Confident

Genome information
Genome ID	UHGV-0056467
vOTU ID	vOTU-015461
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_55893
BioSample	NA
Country	Denmark
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	79.39% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	4
Recoded stop codon	No

Viral signal
geNomad score	0.9793
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	58.57
Jumbo phage	No

Genome content
Genome length	119,692 bps
GC content	34.78%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	135
CDS density	92.01%
Average CDS length	818.31 bps
tRNA count	8
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0056467_4	Structural annotation	PF19266, TIGR01611, COG3499	NA	NA
UHGV-0056467_5	PHROG	phrog_7145	baseplate wedge subunit	tail
UHGV-0056467_6	Structural annotation	PF21683, COG3500	NA	NA
UHGV-0056467_7	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0056467_8	KOfam	K19303	mepH; murein DD-endopeptidase [EC:3.4.-.-]	NA
UHGV-0056467_8	eggNOG-mapper	411473.RUMCAL_00346	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0056467_8	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0056467_8	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0056467_9	PHROG	phrog_9570	tail length tape measure protein	tail
UHGV-0056467_9	eggNOG-mapper	411473.RUMCAL_00345	NLP P60 protein	NA
UHGV-0056467_9	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0056467_9	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0056467_11	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-0056467_12	eggNOG-mapper	335543.Sfum_3832	homolog of phage Mu protein gp47	NA
UHGV-0056467_12	COG	COG3299	NA	NA
UHGV-0056467_12	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0056467_14	UniRef90	UniRef90_U2M6A1	Phage tail protein	NA
UHGV-0056467_14	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-0056467_14	Structural annotation	PF09684, TIGR02242, COG4385	NA	NA
UHGV-0056467_16	Pfam	PF00404	Dockerin type I domain	Dockerin_1
UHGV-0056467_18	PHROG	phrog_207	head maturation protease	head and packaging
UHGV-0056467_18	eggNOG-mapper	444878.E3SR09_9CAUD	Pfam:Peptidase_S77	NA
UHGV-0056467_18	Pfam	PF03420	Prohead core protein serine protease	Peptidase_S77
UHGV-0056467_18	Structural annotation	PF03420, TIGR01543, COG3740	NA	NA
UHGV-0056467_19	PHROG	phrog_138	major head protein	head and packaging
UHGV-0056467_19	Structural annotation	PF07068, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0056467_21	PHROG	phrog_3339	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_21	UniRef90	UniRef90_A0A7T3N2D0	Putative homing endonuclease	NA
UHGV-0056467_21	eggNOG-mapper	1006972.H6SU53_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-0056467_21	Structural annotation	PF04480, PF12568, MF_00824, NF007025, NF007294, COG3818, COG3727	NA	NA
UHGV-0056467_23	PHROG	phrog_211	head-tail adaptor Ad2	connector
UHGV-0056467_23	Structural annotation	PF20387	NA	NA
UHGV-0056467_25	PHROG	phrog_3636	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0056467_25	COG	COG0783	DNA-binding ferritin-like protein (oxidative damage protectant)	NA
UHGV-0056467_25	Structural annotation	PF00210, MF_01441, NF006975, COG0783	NA	NA
UHGV-0056467_26	PHROG	phrog_20259	NA	unknown function
UHGV-0056467_26	eggNOG-mapper	1211640.K4K5Z9_9CAUD	NA	NA
UHGV-0056467_26	Pfam	PF19474	NA	DUF6011
UHGV-0056467_26	Structural annotation	PF19474	NA	NA
UHGV-0056467_29	Structural annotation	PF11031, MF_04104, NF041673, COG2203	NA	NA
UHGV-0056467_30	KOfam	K01449	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0056467_30	Pfam	PF07486	Cell Wall Hydrolase	Hydrolase_2
UHGV-0056467_30	COG	COG3773	Cell wall hydrolase CwlJ, involved in spore germination	NA
UHGV-0056467_30	Structural annotation	TIGR02869, COG3773	NA	NA
UHGV-0056467_31	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0056467_31	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0056467_31	UniRef90	UniRef90_U2KY82	Protein, SNF2 family	NA
UHGV-0056467_31	eggNOG-mapper	411473.RUMCAL_00324	SNF2 family	NA
UHGV-0056467_31	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0056467_31	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0056467_31	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0056467_31	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0056467_31	Structural annotation	PF00176, PF00271, PF07443, MF_01821, NF041790, TIGR01158, COG0553	NA	NA
UHGV-0056467_35	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0056467_35	UniRef90	UniRef90_U2MD58	Holliday junction resolvase RecU	NA
UHGV-0056467_35	eggNOG-mapper	871584.D9ZNH9_9CAUD	Recombination protein U	NA
UHGV-0056467_35	Pfam	PF03838	Recombination protein U	RecU
UHGV-0056467_35	Structural annotation	PF03838, MF_00130, NF002582, COG3331	NA	NA
UHGV-0056467_38	PHROG	phrog_1129	holin	lysis
UHGV-0056467_38	UniRef90	UniRef90_A0A0D8J2M2	Enolase	NA
UHGV-0056467_38	eggNOG-mapper	665956.HMPREF1032_03272	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0056467_38	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0056467_38	Structural annotation	PF06946	NA	NA
UHGV-0056467_39	PHROG	phrog_1221	NA	unknown function
UHGV-0056467_39	UniRef90	UniRef90_A0A843GH20	NA	NA
UHGV-0056467_39	eggNOG-mapper	748224.HMPREF9436_03374	NA	NA
UHGV-0056467_39	Pfam	PF06067	NA	DUF932
UHGV-0056467_39	NCBIFam	TIGR03299.1	phage/plasmid-like protein TIGR03299	NA
UHGV-0056467_39	Structural annotation	PF06067, TIGR03299	NA	NA
UHGV-0056467_40	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-0056467_40	PHROG	phrog_28876	metal-dependent phosphohydrolase	other
UHGV-0056467_40	UniRef90	UniRef90_A0A8J6IP18	HD domain-containing protein	NA
UHGV-0056467_40	eggNOG-mapper	411473.RUMCAL_00307	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0056467_40	Pfam	PF01966	HD domain	HD
UHGV-0056467_40	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0056467_40	Structural annotation	PF07514, MF_01427, NF010007, COG3481	NA	NA
UHGV-0056467_47	KOfam	K03657	uvrD, pcrA; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]	NA
UHGV-0056467_47	PHROG	phrog_1967	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0056467_47	UniRef90	UniRef90_U2KYN9	DNA helicase	NA
UHGV-0056467_47	eggNOG-mapper	411473.RUMCAL_00297	ATP-dependent DNA helicase	NA
UHGV-0056467_47	PADLOC	drt-cluster22	DRT	DRT
UHGV-0056467_47	Pfam	PF00580	UvrD/REP helicase N-terminal domain	UvrD-helicase
UHGV-0056467_47	Pfam	PF13361	UvrD-like helicase C-terminal domain	UvrD_C
UHGV-0056467_47	COG	COG0210	Superfamily I DNA or RNA helicase	NA
UHGV-0056467_47	Structural annotation	PF01443, MF_01920, TIGR01073, COG0210	NA	NA
UHGV-0056467_49	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0056467_49	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_49	UniRef90	UniRef90_U2M633	Putative DNA sulfur modification protein DndD	NA
UHGV-0056467_49	Pfam	PF02463	RecF/RecN/SMC N terminal domain	SMC_N
UHGV-0056467_49	COG	COG0419	DNA repair exonuclease SbcCD ATPase subunit	NA
UHGV-0056467_49	Structural annotation	PF13166, MF_00449, NF002244, COG0419	NA	NA
UHGV-0056467_51	PHROG	phrog_5931	NA	unknown function
UHGV-0056467_51	eggNOG-mapper	882082.SaccyDRAFT_4646	NA	NA
UHGV-0056467_51	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0056467_52	KOfam	K01972	E6.5.1.2, ligA, ligB; DNA ligase (NAD+) [EC:6.5.1.2]	NA
UHGV-0056467_52	PHROG	phrog_3869	NAD-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UHGV-0056467_52	UniRef90	UniRef90_A0A2M9WUQ3	DNA ligase (NAD(+))	NA
UHGV-0056467_52	eggNOG-mapper	1201290.M902_1538	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	NA
UHGV-0056467_52	Pfam	PF01653	NAD-dependent DNA ligase adenylation domain	DNA_ligase_aden
UHGV-0056467_52	Pfam	PF03120	NAD-dependent DNA ligase OB-fold domain	DNA_ligase_OB
UHGV-0056467_52	COG	COG0272	NAD-dependent DNA ligase	NA
UHGV-0056467_52	Structural annotation	PF01653, PF03120, PF00533, MF_01588, NF005932, COG0272	NA	NA
UHGV-0056467_53	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-0056467_53	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0056467_53	UniRef90	UniRef90_A0A8F0WBL8	Thymidylate synthase, flavin-dependent	NA
UHGV-0056467_53	eggNOG-mapper	888832.HMPREF9420_0157	thymidylate synthase (FAD) activity	NA
UHGV-0056467_53	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0056467_53	COG	COG1351	Thymidylate synthase ThyX, FAD-dependent family	NA
UHGV-0056467_53	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0056467_54	Structural annotation	PF09643, NF000331	NA	NA
UHGV-0056467_55	Structural annotation	PF13780	NA	NA
UHGV-0056467_56	UniRef90	UniRef90_A0A3D6B2G4	Mtd_N domain-containing protein	NA
UHGV-0056467_56	eggNOG-mapper	411470.RUMGNA_00120	NA	NA
UHGV-0056467_57	Structural annotation	PF20010	NA	NA
UHGV-0056467_58	PHROG	phrog_23820	tail fiber protein	tail
UHGV-0056467_58	eggNOG-mapper	768710.DesyoDRAFT_1133	tail collar domain protein	NA
UHGV-0056467_58	COG	COG4675	Phage tail collar domain	NA
UHGV-0056467_62	PHROG	phrog_697	structural protein	head and packaging
UHGV-0056467_62	UniRef90	UniRef90_A0A6C0CJK8	Mtd_N domain-containing protein (Fragment)	NA
UHGV-0056467_62	eggNOG-mapper	382359.Q0QZC0_BPSYS	NA	NA
UHGV-0056467_62	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0056467_64	KOfam	K19303	mepH; murein DD-endopeptidase [EC:3.4.-.-]	NA
UHGV-0056467_64	PHROG	phrog_1493	endolysin	lysis
UHGV-0056467_64	UniRef90	UniRef90_A0A2V2DH14	NlpC/P60 domain-containing protein	NA
UHGV-0056467_64	eggNOG-mapper	441769.ABFU01000033_gene39	Putative peptidoglycan binding domain	NA
UHGV-0056467_64	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0056467_64	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0056467_64	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0056467_64	Structural annotation	PF00877, PF01471, PF18342, NF033742, TIGR02869, NF033202, COG4991, COG3409, COG0791	NA	NA
UHGV-0056467_67	KOfam	K09125	yhhQ; queuosine precursor transporter	NA
UHGV-0056467_67	PHROG	phrog_4899	NA	unknown function
UHGV-0056467_67	UniRef90	UniRef90_UPI000E3E4EB9	VUT family protein	NA
UHGV-0056467_67	eggNOG-mapper	1392487.JIAD01000001_gene770	Putative vitamin uptake transporter	NA
UHGV-0056467_67	Pfam	PF02592	Putative vitamin uptake transporter	Vut_1
UHGV-0056467_67	COG	COG1738	NA	NA
UHGV-0056467_67	Structural annotation	PF02592, MF_02088, TIGR00697, COG1738	NA	NA
UHGV-0056467_68	KOfam	K00059	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	NA
UHGV-0056467_68	PHROG	phrog_3142	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0056467_68	UniRef90	UniRef90_A0A174HFL0	3-oxoacyl-[acyl-carrier-protein] reductase FabG	NA
UHGV-0056467_68	eggNOG-mapper	1121115.AXVN01000079_gene2742	Enoyl-(Acyl carrier protein) reductase	NA
UHGV-0056467_68	Pfam	PF13561	Enoyl-(Acyl carrier protein) reductase	adh_short_C2
UHGV-0056467_68	COG	COG1028	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	NA
UHGV-0056467_68	Structural annotation	PF13561, MF_01647, NF005474, COG1028	NA	NA
UHGV-0056467_69	KOfam	K11991	tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]	NA
UHGV-0056467_69	PHROG	phrog_174	dCMP deaminase	DNA, RNA and nucleotide metabolism
UHGV-0056467_69	UniRef90	UniRef90_A0A1G5E0F2	tRNA(Arg) A34 adenosine deaminase TadA	NA
UHGV-0056467_69	eggNOG-mapper	158190.SpiGrapes_0666	tRNA wobble adenosine to inosine editing	NA
UHGV-0056467_69	Pfam	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
UHGV-0056467_69	COG	COG0590	tRNA(Arg) A34 adenosine deaminase TadA	NA
UHGV-0056467_69	Structural annotation	PF14437, MF_00972, NF008113, COG0590	NA	NA
UHGV-0056467_71	PHROG	phrog_8113	NA	unknown function
UHGV-0056467_71	UniRef90	UniRef90_U2M6G8	KTSC domain-containing protein	NA
UHGV-0056467_71	Pfam	PF13619	KTSC domain	KTSC
UHGV-0056467_73	PHROG	phrog_1221	NA	unknown function
UHGV-0056467_73	UniRef90	UniRef90_UPI001E2D938E	NA	NA
UHGV-0056467_73	eggNOG-mapper	97139.C824_05805	NA	NA
UHGV-0056467_73	Pfam	PF06067	NA	DUF932
UHGV-0056467_73	Structural annotation	PF06067, TIGR03299	NA	NA
UHGV-0056467_75	Structural annotation	MF_00962, NF005644, COG1191	NA	NA
UHGV-0056467_77	eggNOG-mapper	411473.RUMCAL_00394	NA	NA
UHGV-0056467_78	eggNOG-mapper	1341157.RF007C_02465	NA	NA
UHGV-0056467_78	Structural annotation	PF01695, MF_00377, NF038214, COG1484	NA	NA
UHGV-0056467_79	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0056467_79	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0056467_79	UniRef90	UniRef90_U2KYX7	SF4 helicase domain-containing protein	NA
UHGV-0056467_79	eggNOG-mapper	411473.RUMCAL_00392	Participates in initiation and elongation during chromosome replication	NA
UHGV-0056467_79	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0056467_79	COG	COG0305	Replicative DNA helicase	NA
UHGV-0056467_79	Structural annotation	PF03796, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0056467_80	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0056467_80	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0056467_80	UniRef90	UniRef90_A0A7C6BQ30	Ribonuclease H	NA
UHGV-0056467_80	eggNOG-mapper	509191.AEDB02000082_gene2545	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	NA
UHGV-0056467_80	Pfam	PF00075	RNase H	RNase_H
UHGV-0056467_80	NCBIFam	NF001236.0	ribonuclease HI	NA
UHGV-0056467_80	COG	COG0328	Ribonuclease HI	NA
UHGV-0056467_80	HAMAP	MF_00042	Ribonuclease H [rnhA]	NA
UHGV-0056467_80	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0056467_81	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0056467_81	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0056467_81	UniRef90	UniRef90_U2M6E9	Toprim domain protein	NA
UHGV-0056467_81	eggNOG-mapper	411473.RUMCAL_00391	Toprim-like	NA
UHGV-0056467_81	PADLOC	drt-cluster192	DRT	DRT
UHGV-0056467_81	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0056467_81	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0056467_81	Structural annotation	PF13155, PF01807, PF08275, MF_00974, TIGR01391, COG0358	NA	NA
UHGV-0056467_82	Structural annotation	NF006147	NA	NA
UHGV-0056467_83	Pfam	PF01242	6-pyruvoyl tetrahydropterin synthase	PTPS
UHGV-0056467_83	COG	COG0720	6-pyruvoyl-tetrahydropterin synthase	NA
UHGV-0056467_83	Structural annotation	PF01242, MF_01527_B, TIGR03112, COG0720	NA	NA
UHGV-0056467_84	PHROG	phrog_14578	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0056467_84	Structural annotation	PF08804	NA	NA
UHGV-0056467_85	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0056467_85	PHROG	phrog_12241	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0056467_85	UniRef90	UniRef90_U2KFK5	DNA polymerase I	NA
UHGV-0056467_85	eggNOG-mapper	411473.RUMCAL_00388	3-5 exonuclease	NA
UHGV-0056467_85	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0056467_85	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0056467_85	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0056467_85	Structural annotation	PF01612, MF_04101, NF004397, COG0749	NA	NA
UHGV-0056467_86	PHROG	phrog_3339	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_86	UniRef90	UniRef90_A0A5S9HY64	Putative Hef-like homing endonuclease	NA
UHGV-0056467_86	eggNOG-mapper	722417.D5GV46_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-0056467_86	Structural annotation	PF04480, PF12568, MF_00824, NF007025, NF007294, COG3818, COG3727	NA	NA
UHGV-0056467_87	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0056467_87	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0056467_87	UniRef90	UniRef90_U2KYX3	DNA-directed DNA polymerase	NA
UHGV-0056467_87	eggNOG-mapper	411473.RUMCAL_00387	intein-mediated protein splicing	NA
UHGV-0056467_87	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0056467_87	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0056467_88	Structural annotation	PF00712, PF02768, MF_00317, TIGR00663, COG0592	NA	NA
UHGV-0056467_89	PHROG	phrog_1706	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
UHGV-0056467_89	eggNOG-mapper	871584.D9ZNH8_9CAUD	nuclease activity	NA
UHGV-0056467_89	PADLOC	COG1468	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; acquisition_associated	CRISPR-CAS
UHGV-0056467_89	Structural annotation	PF10926, MF_03030, TIGR00372, COG5377	NA	NA
UHGV-0056467_90	KOfam	K02343	dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]	NA
UHGV-0056467_90	PHROG	phrog_5846	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0056467_90	UniRef90	UniRef90_UPI0016882862	DNA polymerase III subunit gamma/tau	NA
UHGV-0056467_90	eggNOG-mapper	411473.RUMCAL_00384	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity	NA
UHGV-0056467_90	Pfam	PF07591	Pretoxin HINT domain	PT-HINT
UHGV-0056467_90	Pfam	PF13177	DNA polymerase III, delta subunit	DNA_pol3_delta2
UHGV-0056467_90	NCBIFam	TIGR01443.1	intein C-terminal splicing region	NA
UHGV-0056467_90	COG	COG2812	DNA polymerase III, gamma/tau subunits	NA
UHGV-0056467_90	Structural annotation	PF05203, PF13177, PF12169, PF17864, MF_01509, MF_01420, NF004046, NF005852, COG2812, COG1372	NA	NA
UHGV-0056467_92	KOfam	K03553	recA; recombination protein RecA	NA
UHGV-0056467_92	PHROG	phrog_97	UvsX-like recombinase	other
UHGV-0056467_92	UniRef90	UniRef90_U2KYW9	Protein RecA	NA
UHGV-0056467_92	eggNOG-mapper	411473.RUMCAL_00382	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	NA
UHGV-0056467_92	Pfam	PF00154	recA bacterial DNA recombination protein	RecA
UHGV-0056467_92	COG	COG0468	RecA/RadA recombinase	NA
UHGV-0056467_92	Structural annotation	PF00154, MF_00268, TIGR02012, COG0468	NA	NA
UHGV-0056467_93	eggNOG-mapper	397290.C810_05204	NA	NA
UHGV-0056467_94	PHROG	phrog_2002	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0056467_94	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0056467_95	PHROG	phrog_20214	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0056467_95	Structural annotation	PF12169, PF06144, MF_01508, NF006301, COG2812	NA	NA
UHGV-0056467_96	KOfam	K02341	holB; DNA polymerase III subunit delta' [EC:2.7.7.7]	NA
UHGV-0056467_96	PHROG	phrog_5846	clamp loader of DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0056467_96	UniRef90	UniRef90_U2KFJ7	DNA polymerase III, delta' subunit domain protein	NA
UHGV-0056467_96	eggNOG-mapper	1033737.CAEV01000043_gene1475	DNA polymerase III	NA
UHGV-0056467_96	Pfam	PF13177	DNA polymerase III, delta subunit	DNA_pol3_delta2
UHGV-0056467_96	COG	COG0470	DNA polymerase III, delta prime subunit	NA
UHGV-0056467_96	Structural annotation	PF13177, MF_04162, NF004047, COG2812	NA	NA
UHGV-0056467_97	PHROG	phrog_887	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-0056467_97	UniRef90	UniRef90_E7DN71	Queuosine tRNA-ribosyltransferase	NA
UHGV-0056467_97	eggNOG-mapper	59241.E7DN71_BPDP1	tRNA modification	NA
UHGV-0056467_97	Structural annotation	PF00290, MF_01634, TIGR00432, COG0343	NA	NA
UHGV-0056467_99	PHROG	phrog_18716	NA	unknown function
UHGV-0056467_99	UniRef90	UniRef90_A0A7X7HJW5	NA	NA
UHGV-0056467_99	eggNOG-mapper	1029718.SFBM_0379	NA	NA
UHGV-0056467_99	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0056467_99	Structural annotation	PF18909	NA	NA
UHGV-0056467_101	Structural annotation	PF10651	NA	NA
UHGV-0056467_104	Structural annotation	PF19380	NA	NA
UHGV-0056467_107	UniRef90	UniRef90_U2M6C5	INTEIN_C_TER domain-containing protein	NA
UHGV-0056467_107	eggNOG-mapper	411473.RUMCAL_00366	NA	NA
UHGV-0056467_107	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0056467_108	eggNOG-mapper	411473.RUMCAL_00365	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA	NA
UHGV-0056467_108	Pfam	PF00533	BRCA1 C Terminus (BRCT) domain	BRCT
UHGV-0056467_108	COG	COG0272	NAD-dependent DNA ligase	NA
UHGV-0056467_108	Structural annotation	PF00533, PF01653, MF_01588, TIGR00575, COG0272	NA	NA
UHGV-0056467_109	PHROG	phrog_213	portal protein	head and packaging
UHGV-0056467_109	UniRef90	UniRef90_A0A843GQG5	Portal protein	NA
UHGV-0056467_109	Pfam	PF07230	Bacteriophage T4-like portal protein (Gp20)	Portal_Gp20
UHGV-0056467_109	Structural annotation	PF07230, MF_04135, TIGR01538, COG5511	NA	NA
UHGV-0056467_112	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0056467_113	Structural annotation	PF16724, TIGR01633, COG5003	NA	NA
UHGV-0056467_115	PHROG	phrog_23	tail sheath	tail
UHGV-0056467_115	eggNOG-mapper	1121406.JAEX01000043_gene718	Phage tail sheath C-terminal domain	NA
UHGV-0056467_115	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-0056467_115	Structural annotation	PF17541, PF17481, COG3497	NA	NA
UHGV-0056467_116	PHROG	phrog_3339	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_116	UniRef90	UniRef90_A0A5S9HY64	Putative Hef-like homing endonuclease	NA
UHGV-0056467_116	eggNOG-mapper	1110702.G8GIT2_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-0056467_116	Structural annotation	PF04480, PF12568, MF_02018, NF000358, NF007294, COG3818, COG3727	NA	NA
UHGV-0056467_117	eggNOG-mapper	1304866.K413DRAFT_4695	NA	NA
UHGV-0056467_118	Structural annotation	PF13392	NA	NA
UHGV-0056467_121	eggNOG-mapper	357276.EL88_11485	NA	NA
UHGV-0056467_122	PHROG	phrog_24386	NA	unknown function
UHGV-0056467_122	eggNOG-mapper	742740.HMPREF9474_02291	phosphatase activity	NA
UHGV-0056467_122	COG	COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	NA
UHGV-0056467_125	UniRef90	UniRef90_A0A7X7NW54	InlB B-repeat-containing protein (Fragment)	NA
UHGV-0056467_125	eggNOG-mapper	1227349.C170_16385	dextransucrase activity	NA
UHGV-0056467_125	Pfam	PF09479	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
UHGV-0056467_125	NCBIFam	TIGR02543.1	TIGR02543 family repeat protein	NA
UHGV-0056467_125	COG	COG1934	Lipopolysaccharide export system protein LptA	NA
UHGV-0056467_126	PHROG	phrog_3339	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_126	eggNOG-mapper	1006972.H6SU53_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-0056467_126	Structural annotation	PF04480, PF12568, MF_00824, NF007025, NF007294, COG3818, COG3727	NA	NA
UHGV-0056467_128	PHROG	phrog_3339	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0056467_128	eggNOG-mapper	722417.D5GV46_9CAUD	regulation of transcription, DNA-dependent	NA
UHGV-0056467_128	Structural annotation	PF04480, PF12568, MF_02018, NF000358, NF007294, COG3818, COG3727	NA	NA
UHGV-0056467_130	KOfam	K06283	spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D	NA
UHGV-0056467_130	PHROG	phrog_11726	sporulation stage III protein D	moron, auxiliary metabolic gene and host takeover
UHGV-0056467_130	UniRef90	UniRef90_A0A3E3E0H5	Stage III sporulation protein D	NA
UHGV-0056467_130	eggNOG-mapper	445971.ANASTE_00740	sporulation transcriptional regulator SpoIIID	NA
UHGV-0056467_130	Pfam	PF12116	Stage III sporulation protein D	SpoIIID
UHGV-0056467_130	COG	COG1609	DNA-binding transcriptional regulator, LacI/PurR family	NA
UHGV-0056467_130	Structural annotation	PF12116, TIGR02844	NA	NA
UHGV-0056467_131	PHROG	phrog_1238	phosphoheptose isomerase	moron, auxiliary metabolic gene and host takeover
UHGV-0056467_131	eggNOG-mapper	484770.UFO1_3918	UMP catabolic process	NA
UHGV-0056467_131	COG	COG0647	Ribonucleotide monophosphatase NagD, HAD superfamily	NA
UHGV-0056467_131	Structural annotation	PF08645, TIGR01689, COG0241	NA	NA
UHGV-0056467_133	KOfam	K07341	doc; death on curing protein	NA
UHGV-0056467_133	PHROG	phrog_577	Doc-like toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0056467_133	UniRef90	UniRef90_A0A1F7QQC4	Fido domain-containing protein	NA
UHGV-0056467_133	eggNOG-mapper	1288963.ADIS_1580	Fic/DOC family	NA
UHGV-0056467_133	Pfam	PF02661	Fic/DOC family	Fic
UHGV-0056467_133	NCBIFam	TIGR01550.1	type II toxin-antitoxin system death-on-curing family toxin	NA
UHGV-0056467_133	COG	COG3654	Prophage maintenance system killer protein	NA
UHGV-0056467_134	Structural annotation	PF12322, COG4518	NA	NA