UHGV-0068851

Genome information

Genome length 15,959 bps

CDS count 24

Completeness 82.18% (medium-quality)

geNomad score 0.9814

Prediction confidence Confident

Genome information
Genome ID	UHGV-0068851
vOTU ID	vOTU-029344
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_132822
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.18% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9814
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.1
Jumbo phage	No

Genome content
Genome length	15,959 bps
GC content	35.72%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	24
CDS density	91.93%
Average CDS length	614.63 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0068851_1	KOfam	K12941	abgB; aminobenzoyl-glutamate utilization protein B	NA
UHGV-0068851_1	UniRef90	UniRef90_A0A658JMN5	Amidohydrolase (Fragment)	NA
UHGV-0068851_1	eggNOG-mapper	1121115.AXVN01000094_gene755	NA	NA
UHGV-0068851_1	COG	COG1473	Metal-dependent amidase/aminoacylase/carboxypeptidase	NA
UHGV-0068851_2	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0068851_2	PHROG	phrog_5240	tail fiber protein	tail
UHGV-0068851_2	UniRef90	UniRef90_A0A843GP14	SGNH/GDSL hydrolase family protein	NA
UHGV-0068851_2	eggNOG-mapper	1476973.JMMB01000004_gene3431	PFAM GDSL-like Lipase Acylhydrolase	NA
UHGV-0068851_2	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0068851_2	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0068851_3	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0068851_3	UniRef90	UniRef90_A0A3G3LYS5	Lower collar protein	NA
UHGV-0068851_3	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-0068851_4	PHROG	phrog_2038	upper collar connector	connector
UHGV-0068851_4	UniRef90	UniRef90_P04332	Portal protein	NA
UHGV-0068851_4	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-0068851_4	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0068851_4	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0068851_5	PHROG	phrog_2248	tail protein	tail
UHGV-0068851_5	UniRef90	UniRef90_A0A843HJQ1	Caud_tail_N domain-containing protein	NA
UHGV-0068851_5	eggNOG-mapper	12345.Q9FZW6_BPGA1	NA	NA
UHGV-0068851_5	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0068851_5	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0068851_5	Structural annotation	PF20934, PF16838	NA	NA
UHGV-0068851_6	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0068851_6	UniRef90	UniRef90_A0A843HGC7	Ig-like domain-containing protein	NA
UHGV-0068851_6	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-0068851_6	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-0068851_8	PHROG	phrog_8949	NA	unknown function
UHGV-0068851_8	eggNOG-mapper	1540091.A0A0A0RSI6_9CAUD	amidase activity	NA
UHGV-0068851_8	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0068851_8	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0068851_8	Structural annotation	PF18013	NA	NA
UHGV-0068851_9	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0068851_9	PHROG	phrog_435	endolysin	lysis
UHGV-0068851_9	UniRef90	UniRef90_A0A374ADF5	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0068851_9	eggNOG-mapper	552396.HMPREF0863_00263	hmm pf01520	NA
UHGV-0068851_9	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0068851_9	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0068851_9	Structural annotation	PF01520, TIGR02883, COG0860	NA	NA
UHGV-0068851_10	PHROG	phrog_4898	holin	lysis
UHGV-0068851_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-0068851_11	UniRef90	UniRef90_A0A843HJH1	Phage DNA encapsidation protein	NA
UHGV-0068851_11	eggNOG-mapper	10756.PKG16_BPPH2	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0068851_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0068851_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0068851_16	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0068851_16	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0068851_16	UniRef90	UniRef90_A0A843GSA4	DNA-directed DNA polymerase	NA
UHGV-0068851_16	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0068851_16	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0068851_16	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0068851_18	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-0068851_18	Structural annotation	PF17427	NA	NA
UHGV-0068851_19	Structural annotation	PF17548	NA	NA
UHGV-0068851_20	PHROG	phrog_22292	NA	unknown function