UHGV-0079168

Genome information

vOTU vOTU-031941

Genome length 21,267 bps

CDS count 26

Completeness 50.42% (medium-quality)

geNomad score 0.9789

Prediction confidence Confident

Genome information
Genome ID	UHGV-0079168
vOTU ID	vOTU-031941
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_165373
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.42% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9789
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.26
Jumbo phage	No

Genome content
Genome length	21,267 bps
GC content	40.34%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	26
CDS density	94.97%
Average CDS length	778.96 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0079168_1	UniRef90	UniRef90_UPI0011DDB413	terminase	NA
UHGV-0079168_1	eggNOG-mapper	1298920.KI911353_gene4856	Phage terminase, large subunit, PBSX family	NA
UHGV-0079168_1	COG	COG1783	Phage terminase large subunit	NA
UHGV-0079168_2	KOfam	K06926	NA	NA
UHGV-0079168_2	PHROG	phrog_5836	NA	unknown function
UHGV-0079168_2	UniRef90	UniRef90_A0A1C5X482	Predicted ATP-binding protein involved in virulence	NA
UHGV-0079168_2	eggNOG-mapper	500633.CLOHIR_00519	NA	NA
UHGV-0079168_2	PADLOC	AbiLi-1	AbiLi	Abi
UHGV-0079168_2	Pfam	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system	AAA_21
UHGV-0079168_2	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-0079168_2	Structural annotation	PF13304, MF_00365, NF041760, COG1195	NA	NA
UHGV-0079168_3	PHROG	phrog_10204	NA	unknown function
UHGV-0079168_3	eggNOG-mapper	1200567.JNKD01000025_gene587	NA	NA
UHGV-0079168_3	AcrCatalog	cluster_12761	NA	NA
UHGV-0079168_4	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0079168_4	UniRef90	UniRef90_A0A416N388	Terminase	NA
UHGV-0079168_4	eggNOG-mapper	33035.JPJF01000107_gene435	NA	NA
UHGV-0079168_4	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-0079168_4	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0079168_4	COG	COG5484	NA	NA
UHGV-0079168_4	Structural annotation	PF06056, NF040601, COG5484	NA	NA
UHGV-0079168_5	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0079168_5	PHROG	phrog_10250	NA	unknown function
UHGV-0079168_5	UniRef90	UniRef90_A0A416N3M1	PBSX family phage terminase large subunit	NA
UHGV-0079168_5	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-0079168_5	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0079168_5	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0079168_5	COG	COG1783	Phage terminase large subunit	NA
UHGV-0079168_5	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0079168_6	PHROG	phrog_64	portal protein	head and packaging
UHGV-0079168_6	UniRef90	UniRef90_A0A173WMA1	Phage portal protein, SPP1 family	NA
UHGV-0079168_6	eggNOG-mapper	742733.HMPREF9469_01826	Phage portal protein, SPP1 family	NA
UHGV-0079168_6	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0079168_6	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0079168_6	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0079168_7	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0079168_7	UniRef90	UniRef90_A0A1C5VLG6	NAD(+)--arginine ADP-ribosyltransferase EFV	NA
UHGV-0079168_7	eggNOG-mapper	1211844.CBLM010000016_gene1495	Phage Mu protein F like protein	NA
UHGV-0079168_7	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0079168_7	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0079168_7	COG	COG2369	NA	NA
UHGV-0079168_7	Structural annotation	PF21814, PF04233, TIGR01641, COG2369	NA	NA
UHGV-0079168_9	PHROG	phrog_1048	NA	unknown function
UHGV-0079168_9	UniRef90	UniRef90_A0A373P4J3	NA	NA
UHGV-0079168_9	eggNOG-mapper	457412.RSAG_01107	NA	NA
UHGV-0079168_9	Pfam	PF11195	NA	DUF2829
UHGV-0079168_9	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0079168_9	Structural annotation	PF11195	NA	NA
UHGV-0079168_10	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0079168_10	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-0079168_10	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-0079168_11	Structural annotation	PF01281	NA	NA
UHGV-0079168_12	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0079168_12	UniRef90	UniRef90_A0A415FLT0	NA	NA
UHGV-0079168_12	eggNOG-mapper	742733.HMPREF9469_01824	NA	NA
UHGV-0079168_12	Pfam	PF14265	NA	DUF4355
UHGV-0079168_12	Structural annotation	PF14265	NA	NA
UHGV-0079168_13	PHROG	phrog_247	major head protein	head and packaging
UHGV-0079168_13	UniRef90	UniRef90_UPI00156DFF0E	coat protein	NA
UHGV-0079168_13	eggNOG-mapper	1304866.K413DRAFT_3038	NA	NA
UHGV-0079168_13	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0079168_14	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0079168_14	UniRef90	UniRef90_A0A173WLV7	Phage gp6-like head-tail connector protein	NA
UHGV-0079168_14	eggNOG-mapper	742733.HMPREF9469_01821	Phage gp6-like head-tail connector protein	NA
UHGV-0079168_14	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0079168_14	Structural annotation	PF05135	NA	NA
UHGV-0079168_15	PHROG	phrog_2168	NA	unknown function
UHGV-0079168_15	eggNOG-mapper	1280689.AUJC01000003_gene969	NA	NA
UHGV-0079168_15	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0079168_16	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0079168_16	UniRef90	UniRef90_A0A173WPF3	Phage protein, HK97 gp10 family	NA
UHGV-0079168_16	eggNOG-mapper	742733.HMPREF9469_01819	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0079168_16	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0079168_16	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0079168_16	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0079168_17	PHROG	phrog_78	tail terminator	connector
UHGV-0079168_17	eggNOG-mapper	742733.HMPREF9469_01818	NA	NA
UHGV-0079168_17	Structural annotation	PF05657	NA	NA
UHGV-0079168_18	PHROG	phrog_158	major tail protein	tail
UHGV-0079168_18	UniRef90	UniRef90_A0A415FLM9	Phage tail protein	NA
UHGV-0079168_18	eggNOG-mapper	742733.HMPREF9469_01817	Phage tail tube protein, TTP	NA
UHGV-0079168_18	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0079168_19	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0079168_19	UniRef90	UniRef90_UPI0011DE12FE	NA	NA
UHGV-0079168_19	eggNOG-mapper	742733.HMPREF9469_01816	NA	NA
UHGV-0079168_19	Structural annotation	PF19591	NA	NA
UHGV-0079168_20	PHROG	phrog_2066	NA	unknown function
UHGV-0079168_20	eggNOG-mapper	445974.CLORAM_02922	NA	NA
UHGV-0079168_21	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0079168_21	UniRef90	UniRef90_A0A173WM72	Phage-related protein	NA
UHGV-0079168_21	eggNOG-mapper	1304866.K413DRAFT_3046	NA	NA
UHGV-0079168_21	COG	COG5283	Phage-related tail protein	NA
UHGV-0079168_22	PHROG	phrog_1194	NA	unknown function
UHGV-0079168_22	UniRef90	UniRef90_R7F8R7	Putative phage protein	NA
UHGV-0079168_22	eggNOG-mapper	1232453.BAIF02000058_gene1638	NA	NA
UHGV-0079168_22	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0079168_23	PHROG	phrog_1401	NA	unknown function
UHGV-0079168_23	UniRef90	UniRef90_UPI00129D2DCF	NA	NA
UHGV-0079168_23	eggNOG-mapper	1294142.CINTURNW_1041	NA	NA
UHGV-0079168_23	Structural annotation	PF07761	NA	NA
UHGV-0079168_24	PHROG	phrog_6616	tail protein	tail
UHGV-0079168_24	UniRef90	UniRef90_UPI001C10B551	tail fiber domain-containing protein	NA
UHGV-0079168_24	eggNOG-mapper	1232453.BAIF02000058_gene1641	Phage minor structural protein	NA
UHGV-0079168_24	COG	COG4926	Phage-related protein	NA
UHGV-0079168_24	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0079168_25	eggNOG-mapper	411459.RUMOBE_04220	Histidine kinase	NA
UHGV-0079168_25	COG	COG0642	Signal transduction histidine kinase	NA
UHGV-0079168_26	UniRef90	UniRef90_A0A2X2UIW5	Collagen-binding surface protein	NA
UHGV-0079168_26	eggNOG-mapper	411459.RUMOBE_02489	LPXTG-motif cell wall anchor domain protein	NA
UHGV-0079168_26	COG	COG4932	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	NA