UHGV-0081225

Genome information

Genome length 33,937 bps

CDS count 50

Completeness 90.72% (high-quality)

geNomad score 0.9753

Prediction confidence Confident

Genome information
Genome ID	UHGV-0081225
vOTU ID	vOTU-014729
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_160657
BioSample	SAMEA3136733
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.72% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9753
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.52
Jumbo phage	No

Genome content
Genome length	33,937 bps
GC content	43.37%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	93.34%
Average CDS length	636.54 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0081225_1	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0081225_1	PHROG	phrog_1412	antitoxin mazE-like	moron, auxiliary metabolic gene and host takeover
UHGV-0081225_1	UniRef90	UniRef90_A0A174C5C9	PemK-like protein	NA
UHGV-0081225_1	eggNOG-mapper	665950.HMPREF1025_02564	Toxic component of a toxin-antitoxin (TA) module	NA
UHGV-0081225_1	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0081225_1	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0081225_1	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0081225_2	PHROG	phrog_20886	NA	unknown function
UHGV-0081225_2	eggNOG-mapper	665950.HMPREF1025_02563	NA	NA
UHGV-0081225_2	Structural annotation	PF06114	NA	NA
UHGV-0081225_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0081225_3	UniRef90	UniRef90_F3AXV8	HTH cro/C1-type domain-containing protein	NA
UHGV-0081225_3	eggNOG-mapper	665950.HMPREF1025_02562	TRANSCRIPTIONal	NA
UHGV-0081225_3	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0081225_3	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0081225_3	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0081225_4	PHROG	phrog_18248	transcriptional regulator	transcription regulation
UHGV-0081225_4	UniRef90	UniRef90_F3AXV7	HTH cro/C1-type domain-containing protein	NA
UHGV-0081225_4	eggNOG-mapper	665950.HMPREF1025_02561	sequence-specific DNA binding	NA
UHGV-0081225_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0081225_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0081225_4	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0081225_5	UniRef90	UniRef90_A0A8E3SKS9	Zinc ribbon domain-containing protein	NA
UHGV-0081225_5	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0081225_6	PHROG	phrog_21028	NA	unknown function
UHGV-0081225_6	eggNOG-mapper	742723.HMPREF9477_00934	NA	NA
UHGV-0081225_6	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-0081225_8	PHROG	phrog_22934	NA	unknown function
UHGV-0081225_10	PHROG	phrog_30234	NA	unknown function
UHGV-0081225_10	eggNOG-mapper	33035.JPJF01000071_gene4461	NA	NA
UHGV-0081225_12	PHROG	phrog_3657	NA	unknown function
UHGV-0081225_12	UniRef90	UniRef90_UPI001DC4E782	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-0081225_12	eggNOG-mapper	411461.DORFOR_00020	NA	NA
UHGV-0081225_13	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0081225_13	UniRef90	UniRef90_A0A828SZZ9	NA	NA
UHGV-0081225_13	eggNOG-mapper	411461.DORFOR_00019	NA	NA
UHGV-0081225_13	Pfam	PF12684	NA	DUF3799
UHGV-0081225_13	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0081225_13	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0081225_14	KOfam	K25503	cedB; DNA import protein CedB	NA
UHGV-0081225_14	PHROG	phrog_7035	NA	unknown function
UHGV-0081225_14	UniRef90	UniRef90_A0A828SUY0	NA	NA
UHGV-0081225_14	eggNOG-mapper	411461.DORFOR_00018	NA	NA
UHGV-0081225_14	PADLOC	HerA_00002	NA	GAO_19 \| GAO_20
UHGV-0081225_14	Pfam	PF01935	Helicase HerA, central domain	DUF87
UHGV-0081225_14	COG	COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	NA
UHGV-0081225_14	Structural annotation	PF12846, PF09378, MF_01347, NF040937, COG0433	NA	NA
UHGV-0081225_15	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0081225_15	eggNOG-mapper	411461.DORFOR_00017	NA	NA
UHGV-0081225_16	PHROG	phrog_1029	NA	unknown function
UHGV-0081225_16	eggNOG-mapper	411461.DORFOR_00016	NA	NA
UHGV-0081225_16	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0081225_17	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0081225_17	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0081225_17	UniRef90	UniRef90_UPI00073E37C2	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0081225_17	eggNOG-mapper	742765.HMPREF9457_02108	Endodeoxyribonuclease RusA	NA
UHGV-0081225_17	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0081225_17	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0081225_17	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0081225_18	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0081225_18	UniRef90	UniRef90_A0A828SZP8	NA	NA
UHGV-0081225_18	eggNOG-mapper	411461.DORFOR_00014	NA	NA
UHGV-0081225_18	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0081225_18	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0081225_18	Structural annotation	PF14297, TIGR01446, TIGR01714	NA	NA
UHGV-0081225_19	PHROG	phrog_25488	NA	unknown function
UHGV-0081225_19	Structural annotation	PF12844, PF01316, MF_00535, TIGR00270, COG1476	NA	NA
UHGV-0081225_20	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0081225_20	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0081225_20	UniRef90	UniRef90_A0A828SYW6	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0081225_20	eggNOG-mapper	411460.RUMTOR_02076	C-5 cytosine-specific DNA methylase	NA
UHGV-0081225_20	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0081225_20	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0081225_20	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0081225_20	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0081225_21	PHROG	phrog_25555	NA	unknown function
UHGV-0081225_22	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0081225_22	UniRef90	UniRef90_A0A3A6HTW3	Sigma70_r4 domain-containing protein	NA
UHGV-0081225_22	eggNOG-mapper	411460.RUMTOR_02080	NA	NA
UHGV-0081225_22	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0081225_23	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-0081225_23	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0081225_23	UniRef90	UniRef90_A0A396PU56	Type II toxin-antitoxin system HicA family toxin	NA
UHGV-0081225_23	eggNOG-mapper	411460.RUMTOR_02081	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0081225_23	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0081225_23	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-0081225_23	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0081225_24	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0081225_24	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0081225_24	UniRef90	UniRef90_A5KP98	Toxin-antitoxin system, antitoxin component, HicB family	NA
UHGV-0081225_24	eggNOG-mapper	411460.RUMTOR_02082	NA	NA
UHGV-0081225_24	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0081225_24	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0081225_24	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0081225_25	eggNOG-mapper	411460.RUMTOR_02083	NA	NA
UHGV-0081225_26	PHROG	phrog_2412	NA	unknown function
UHGV-0081225_26	UniRef90	UniRef90_UPI001E414EFE	KGG domain-containing protein	NA
UHGV-0081225_26	eggNOG-mapper	742723.HMPREF9477_00912	NA	NA
UHGV-0081225_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0081225_27	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0081225_27	UniRef90	UniRef90_A5KPA1	Phage terminase, large subunit, PBSX family	NA
UHGV-0081225_27	eggNOG-mapper	411460.RUMTOR_02085	NA	NA
UHGV-0081225_27	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0081225_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0081225_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-0081225_27	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0081225_28	PHROG	phrog_533	portal protein	head and packaging
UHGV-0081225_28	UniRef90	UniRef90_A0A174B716	Phage portal protein, putative, A118 family	NA
UHGV-0081225_28	eggNOG-mapper	658655.HMPREF0988_02564	NA	NA
UHGV-0081225_28	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0081225_29	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0081225_29	UniRef90	UniRef90_UPI001EE14397	phage minor capsid protein	NA
UHGV-0081225_29	eggNOG-mapper	658655.HMPREF0988_02563	Phage minor capsid protein 2	NA
UHGV-0081225_29	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0081225_29	COG	COG2369	NA	NA
UHGV-0081225_29	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-0081225_30	eggNOG-mapper	411460.RUMTOR_02087	NA	NA
UHGV-0081225_31	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0081225_31	UniRef90	UniRef90_A5KPA4	Phage minor structural protein GP20	NA
UHGV-0081225_31	eggNOG-mapper	411460.RUMTOR_02088	COG NOG36366 non supervised orthologous group	NA
UHGV-0081225_31	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0081225_31	Structural annotation	PF06810	NA	NA
UHGV-0081225_32	PHROG	phrog_422	major head protein	head and packaging
UHGV-0081225_32	eggNOG-mapper	411470.RUMGNA_02219	NA	NA
UHGV-0081225_32	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0081225_33	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0081225_33	eggNOG-mapper	411461.DORFOR_00743	NA	NA
UHGV-0081225_34	PHROG	phrog_3366	NA	unknown function
UHGV-0081225_34	eggNOG-mapper	742723.HMPREF9477_00903	NA	NA
UHGV-0081225_34	Pfam	PF20536	NA	DUF6751
UHGV-0081225_34	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0081225_35	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0081225_35	UniRef90	UniRef90_A0A174B7G8	Minor capsid protein	NA
UHGV-0081225_35	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-0081225_35	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0081225_35	Structural annotation	PF11114	NA	NA
UHGV-0081225_36	PHROG	phrog_3266	tail completion	connector
UHGV-0081225_36	UniRef90	UniRef90_UPI0011DD0321	chloramphenicol resistance protein	NA
UHGV-0081225_36	eggNOG-mapper	742723.HMPREF9477_00901	NA	NA
UHGV-0081225_36	Structural annotation	PF12691	NA	NA
UHGV-0081225_37	PHROG	phrog_3099	NA	unknown function
UHGV-0081225_37	UniRef90	UniRef90_A0A3P6KYP0	Phage capsid family protein	NA
UHGV-0081225_37	eggNOG-mapper	742723.HMPREF9477_00900	NA	NA
UHGV-0081225_37	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0081225_38	PHROG	phrog_4450	NA	unknown function
UHGV-0081225_38	eggNOG-mapper	1280692.AUJL01000004_gene838	NA	NA
UHGV-0081225_38	Pfam	PF20378	NA	DUF6673
UHGV-0081225_38	Structural annotation	PF20378	NA	NA
UHGV-0081225_39	PHROG	phrog_706	NA	unknown function
UHGV-0081225_39	UniRef90	UniRef90_A0A174B750	Bacteriophage Gp15 protein	NA
UHGV-0081225_39	eggNOG-mapper	411460.RUMTOR_02091	COG NOG24969 non supervised orthologous group	NA
UHGV-0081225_39	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0081225_39	Structural annotation	PF06854	NA	NA
UHGV-0081225_40	eggNOG-mapper	537013.CLOSTMETH_01260	NA	NA
UHGV-0081225_41	PHROG	phrog_5218	NA	unknown function
UHGV-0081225_41	UniRef90	UniRef90_A5KPB0	Phage tail tape measure protein, TP901 family	NA
UHGV-0081225_41	eggNOG-mapper	411460.RUMTOR_02094	Phage-related minor tail protein	NA
UHGV-0081225_41	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0081225_41	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0081225_41	COG	COG4487	NA	NA
UHGV-0081225_41	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0081225_42	UniRef90	UniRef90_UPI001F242491	phage tail family protein	NA
UHGV-0081225_42	eggNOG-mapper	411460.RUMTOR_02095	NA	NA
UHGV-0081225_42	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0081225_43	PHROG	phrog_538	minor tail protein	tail
UHGV-0081225_43	UniRef90	UniRef90_UPI001F3E20C1	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0081225_43	eggNOG-mapper	411460.RUMTOR_02096	NA	NA
UHGV-0081225_43	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0081225_43	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0081225_44	PHROG	phrog_13141	NA	unknown function
UHGV-0081225_44	UniRef90	UniRef90_A0A6L8RVX5	H_lectin domain-containing protein	NA
UHGV-0081225_44	eggNOG-mapper	411460.RUMTOR_02097	NA	NA
UHGV-0081225_44	Structural annotation	PF20747, PF17900	NA	NA
UHGV-0081225_45	PHROG	phrog_2712	tail fiber protein	tail
UHGV-0081225_45	eggNOG-mapper	553973.CLOHYLEM_05669	to Mitochondrial intermediate peptidase K01410	NA
UHGV-0081225_45	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0081225_46	PHROG	phrog_30034	NA	unknown function
UHGV-0081225_46	eggNOG-mapper	665950.HMPREF1025_02518	NA	NA
UHGV-0081225_47	PHROG	phrog_5056	NA	unknown function
UHGV-0081225_47	eggNOG-mapper	1033738.CAEP01000136_gene2875	NA	NA
UHGV-0081225_47	Structural annotation	NF040910	NA	NA
UHGV-0081225_48	PHROG	phrog_5056	NA	unknown function
UHGV-0081225_48	eggNOG-mapper	665950.HMPREF1025_02516	NA	NA
UHGV-0081225_48	Structural annotation	NF040910	NA	NA
UHGV-0081225_49	PHROG	phrog_199	holin	lysis
UHGV-0081225_49	UniRef90	UniRef90_A5KPB6	Toxin secretion/phage lysis holin	NA
UHGV-0081225_49	eggNOG-mapper	411460.RUMTOR_02100	NA	NA
UHGV-0081225_49	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0081225_49	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0081225_49	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0081225_50	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0081225_50	PHROG	phrog_833	endolysin	lysis
UHGV-0081225_50	UniRef90	UniRef90_F3AXQ7	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0081225_50	eggNOG-mapper	665950.HMPREF1025_02511	Ami_2	NA
UHGV-0081225_50	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0081225_50	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0081225_50	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA