UHGV-0081520

Genome information

Genome length 47,229 bps

CDS count 75

Completeness 99.90% (high-quality)

geNomad score 0.9759

Prediction confidence Confident

Genome information
Genome ID	UHGV-0081520
vOTU ID	vOTU-014311
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_162029
BioSample	SAMEA3136730
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	Provirus
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	21
CheckV host markers	2
Recoded stop codon	No

Viral signal
geNomad score	0.9759
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.26
Jumbo phage	No

Genome content
Genome length	47,229 bps
GC content	42.96%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	75
CDS density	92.72%
Average CDS length	586.96 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0081520_2	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0081520_2	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0081520_2	UniRef90	UniRef90_A0A373PSG8	Recombinase	NA
UHGV-0081520_2	eggNOG-mapper	431943.CKL_0416	RecT family	NA
UHGV-0081520_2	Pfam	PF03837	RecT family	RecT
UHGV-0081520_2	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0081520_2	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0081520_2	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0081520_3	PHROG	phrog_674	NA	unknown function
UHGV-0081520_3	UniRef90	UniRef90_A0A373PSC5	NA	NA
UHGV-0081520_3	eggNOG-mapper	1095750.HMPREF9970_1676	NA	NA
UHGV-0081520_3	Pfam	PF07083	NA	DUF1351
UHGV-0081520_3	Structural annotation	PF07083	NA	NA
UHGV-0081520_4	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0081520_4	UniRef90	UniRef90_A0A391PE99	NA	NA
UHGV-0081520_4	eggNOG-mapper	33035.JPJF01000071_gene4463	NA	NA
UHGV-0081520_4	Pfam	PF12684	NA	DUF3799
UHGV-0081520_4	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0081520_4	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0081520_5	PHROG	phrog_9474	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0081520_5	eggNOG-mapper	411459.RUMOBE_01034	DnaD domain protein	NA
UHGV-0081520_5	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0081520_5	Structural annotation	PF09681, TIGR01714, COG3756	NA	NA
UHGV-0081520_6	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0081520_6	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0081520_6	UniRef90	UniRef90_A0A391P379	AAA domain-containing protein	NA
UHGV-0081520_6	eggNOG-mapper	411459.RUMOBE_01035	NA	NA
UHGV-0081520_6	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0081520_6	NCBIFam	NF005992.0	hypothetical protein	NA
UHGV-0081520_6	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0081520_6	Structural annotation	PF01695, MF_01919, NF005992, COG1484	NA	NA
UHGV-0081520_7	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0081520_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0081520_7	UniRef90	UniRef90_A0A391P6T8	HTH cro/C1-type domain-containing protein	NA
UHGV-0081520_7	eggNOG-mapper	445973.CLOBAR_02591	Cupin domain	NA
UHGV-0081520_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0081520_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0081520_7	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0081520_8	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0081520_8	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0081520_8	UniRef90	UniRef90_A0A174QVH0	Holliday junction resolvase	NA
UHGV-0081520_8	eggNOG-mapper	411459.RUMOBE_01038	COG COG4570 Holliday junction resolvase	NA
UHGV-0081520_8	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0081520_8	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0081520_8	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0081520_11	PHROG	phrog_5984	NA	unknown function
UHGV-0081520_11	eggNOG-mapper	411459.RUMOBE_01041	NA	NA
UHGV-0081520_11	Structural annotation	PF19561	NA	NA
UHGV-0081520_13	PHROG	phrog_1558	NA	unknown function
UHGV-0081520_13	UniRef90	UniRef90_A0A412NHJ2	HTH domain-containing protein	NA
UHGV-0081520_13	eggNOG-mapper	665956.HMPREF1032_03078	NA	NA
UHGV-0081520_13	Structural annotation	TIGR01637, COG2739	NA	NA
UHGV-0081520_14	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0081520_14	UniRef90	UniRef90_UPI001C018E19	ParB N-terminal domain-containing protein	NA
UHGV-0081520_14	eggNOG-mapper	1236514.BAKL01000015_gene1639	ParB-like nuclease domain	NA
UHGV-0081520_14	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0081520_14	Structural annotation	PF02195, MF_02015, TIGR03764	NA	NA
UHGV-0081520_15	KOfam	K01586	lysA; diaminopimelate decarboxylase [EC:4.1.1.20]	NA
UHGV-0081520_15	UniRef90	UniRef90_A0A391P6U6	Diaminopimelate decarboxylase	NA
UHGV-0081520_15	eggNOG-mapper	1235799.C818_02942	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	NA
UHGV-0081520_15	Pfam	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Orn_Arg_deC_N
UHGV-0081520_15	COG	COG0019	Diaminopimelate decarboxylase	NA
UHGV-0081520_15	Structural annotation	PF00278, MF_02120, NF041039, COG0019	NA	NA
UHGV-0081520_16	UniRef90	UniRef90_A0A391P3L2	ATP-grasp domain-containing protein	NA
UHGV-0081520_16	eggNOG-mapper	927704.SELR_18280	Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase)	NA
UHGV-0081520_16	Pfam	PF21360	PylC-like, N-terminal domain	PylC-like_N
UHGV-0081520_16	Pfam	PF15632	ATP-grasp in the biosynthetic pathway with Ter operon	ATPgrasp_Ter
UHGV-0081520_16	COG	COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	NA
UHGV-0081520_16	Structural annotation	PF15632, PF21360, MF_02221, NF009405, COG3919	NA	NA
UHGV-0081520_17	Structural annotation	PF20691, MF_00316, TIGR04017, COG1216	NA	NA
UHGV-0081520_18	PHROG	phrog_16866	NA	unknown function
UHGV-0081520_18	UniRef90	UniRef90_A0A174R0S7	Recombination factor protein RarA	NA
UHGV-0081520_18	eggNOG-mapper	927704.SELR_18260	atpase related to the helicase subunit of the holliday junction resolvase	NA
UHGV-0081520_18	COG	COG2256	Replication-associated recombination protein RarA (DNA-dependent ATPase)	NA
UHGV-0081520_18	Structural annotation	NF011289	NA	NA
UHGV-0081520_19	PHROG	phrog_18237	NA	unknown function
UHGV-0081520_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0081520_20	PHROG	phrog_29775	NA	unknown function
UHGV-0081520_20	UniRef90	UniRef90_A0A174R0Z2	Phage terminase, large subunit, PBSX family	NA
UHGV-0081520_20	eggNOG-mapper	632245.CLP_1641	Phage terminase, large subunit, PBSX family	NA
UHGV-0081520_20	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0081520_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-0081520_21	eggNOG-mapper	1292035.H476_1019	Phage terminase large subunit	NA
UHGV-0081520_21	COG	COG1783	Phage terminase large subunit	NA
UHGV-0081520_22	PHROG	phrog_533	portal protein	head and packaging
UHGV-0081520_22	UniRef90	UniRef90_A0A174R3E6	Phage portal protein, putative, A118 family	NA
UHGV-0081520_22	eggNOG-mapper	665956.HMPREF1032_03069	NA	NA
UHGV-0081520_22	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0081520_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0081520_24	UniRef90	UniRef90_A0A373PU57	Phage capsid protein	NA
UHGV-0081520_24	eggNOG-mapper	411490.ANACAC_00781	NA	NA
UHGV-0081520_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0081520_24	COG	COG2369	NA	NA
UHGV-0081520_24	Structural annotation	PF06152	NA	NA
UHGV-0081520_25	PHROG	phrog_1048	NA	unknown function
UHGV-0081520_25	UniRef90	UniRef90_A0A849XP01	NA	NA
UHGV-0081520_25	eggNOG-mapper	411462.DORLON_00765	NA	NA
UHGV-0081520_25	Pfam	PF11195	NA	DUF2829
UHGV-0081520_25	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0081520_25	Structural annotation	PF11195	NA	NA
UHGV-0081520_26	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0081520_26	UniRef90	UniRef90_A0A174K280	Phage minor structural protein GP20	NA
UHGV-0081520_26	eggNOG-mapper	545697.HMPREF0216_02848	Phage minor structural protein GP20	NA
UHGV-0081520_26	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0081520_27	PHROG	phrog_422	major head protein	head and packaging
UHGV-0081520_27	UniRef90	UniRef90_A0A391PAL7	Phage capsid protein	NA
UHGV-0081520_27	eggNOG-mapper	545697.HMPREF0216_02849	NA	NA
UHGV-0081520_27	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0081520_28	PHROG	phrog_1378	NA	unknown function
UHGV-0081520_29	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0081520_29	eggNOG-mapper	658655.HMPREF0988_02559	NA	NA
UHGV-0081520_30	PHROG	phrog_3366	NA	unknown function
UHGV-0081520_30	eggNOG-mapper	411462.DORLON_00784	NA	NA
UHGV-0081520_30	Pfam	PF20536	NA	DUF6751
UHGV-0081520_30	Structural annotation	PF20536	NA	NA
UHGV-0081520_31	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0081520_31	UniRef90	UniRef90_UPI001D074B8B	minor capsid protein	NA
UHGV-0081520_31	eggNOG-mapper	1321782.HMPREF1986_02271	NA	NA
UHGV-0081520_31	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0081520_31	Structural annotation	PF11114	NA	NA
UHGV-0081520_32	PHROG	phrog_3266	tail completion	connector
UHGV-0081520_32	UniRef90	UniRef90_A0A355UZ60	Chloramphenicol resistance protein	NA
UHGV-0081520_32	eggNOG-mapper	1321782.HMPREF1986_02272	NA	NA
UHGV-0081520_32	Structural annotation	PF12691	NA	NA
UHGV-0081520_33	PHROG	phrog_3099	NA	unknown function
UHGV-0081520_33	UniRef90	UniRef90_A0A0A8WJB7	S-l_SbsC_C domain-containing protein	NA
UHGV-0081520_33	eggNOG-mapper	903814.ELI_3202	NA	NA
UHGV-0081520_33	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0081520_34	PHROG	phrog_4450	NA	unknown function
UHGV-0081520_34	UniRef90	UniRef90_A0A7M2RHR3	AP endonuclease	NA
UHGV-0081520_34	eggNOG-mapper	536233.CLO_1573	NA	NA
UHGV-0081520_34	Pfam	PF20378	NA	DUF6673
UHGV-0081520_34	Structural annotation	PF20378	NA	NA
UHGV-0081520_35	PHROG	phrog_706	NA	unknown function
UHGV-0081520_35	UniRef90	UniRef90_A0A174K3F3	Bacteriophage Gp15 protein	NA
UHGV-0081520_35	eggNOG-mapper	1540257.JQMW01000013_gene734	Bacteriophage Gp15 protein	NA
UHGV-0081520_35	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0081520_35	Structural annotation	PF06854	NA	NA
UHGV-0081520_36	Structural annotation	PF14205	NA	NA
UHGV-0081520_37	PHROG	phrog_19074	NA	unknown function
UHGV-0081520_37	UniRef90	UniRef90_A0A391P3M6	PhageMin_Tail domain-containing protein	NA
UHGV-0081520_37	eggNOG-mapper	1235792.C808_05377	Phage tail tape measure protein, TP901 family	NA
UHGV-0081520_37	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0081520_37	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0081520_37	COG	COG5283	Phage-related tail protein	NA
UHGV-0081520_37	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0081520_38	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0081520_38	UniRef90	UniRef90_D4J8M6	Phage tail protein	NA
UHGV-0081520_38	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0081520_38	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0081520_38	COG	COG4722	Phage-related protein YomH	NA
UHGV-0081520_38	Structural annotation	PF05709, PF02408, TIGR01633, COG4722	NA	NA
UHGV-0081520_39	PHROG	phrog_9886	NA	unknown function
UHGV-0081520_39	UniRef90	UniRef90_H7BV46	Prophage_tail domain-containing protein	NA
UHGV-0081520_39	eggNOG-mapper	862969.SCI_1225	Prophage endopeptidase tail	NA
UHGV-0081520_39	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0081520_39	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0081520_39	COG	COG4926	Phage-related protein	NA
UHGV-0081520_39	Structural annotation	PF06605, PF15425, PF03944, PF21683, MF_00813, TIGR01665, NF033675, NF038128, COG4926	NA	NA
UHGV-0081520_41	PHROG	phrog_11105	NA	unknown function
UHGV-0081520_42	PHROG	phrog_25468	NA	unknown function
UHGV-0081520_42	eggNOG-mapper	1235802.C823_01049	NA	NA
UHGV-0081520_43	PHROG	phrog_937	hemolysin	other
UHGV-0081520_43	eggNOG-mapper	742740.HMPREF9474_03172	NA	NA
UHGV-0081520_44	eggNOG-mapper	1291050.JAGE01000001_gene431	NA	NA
UHGV-0081520_45	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0081520_45	PHROG	phrog_435	endolysin	lysis
UHGV-0081520_45	UniRef90	UniRef90_A0A1C6L515	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0081520_45	eggNOG-mapper	411461.DORFOR_01187	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0081520_45	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0081520_45	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0081520_45	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-0081520_52	eggNOG-mapper	1485543.JMME01000023_gene2454	NA	NA
UHGV-0081520_54	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0081520_54	PHROG	phrog_3502	NA	unknown function
UHGV-0081520_54	UniRef90	UniRef90_A0A373PSR1	LexA_DNA_bind domain-containing protein	NA
UHGV-0081520_54	eggNOG-mapper	411902.CLOBOL_05676	LexA DNA binding domain	NA
UHGV-0081520_54	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0081520_54	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0081520_55	eggNOG-mapper	1203606.HMPREF1526_00222	NA	NA
UHGV-0081520_56	UniRef90	UniRef90_A0A373PQV8	XRE family transcriptional regulator	NA
UHGV-0081520_56	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0081520_56	Structural annotation	PF01381, TIGR03070, COG1476	NA	NA
UHGV-0081520_59	PHROG	phrog_19789	NA	unknown function
UHGV-0081520_61	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0081520_61	UniRef90	UniRef90_D9SWE5	Putative transcriptional regulator, XRE family	NA
UHGV-0081520_61	eggNOG-mapper	573061.Clocel_3551	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0081520_61	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0081520_61	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0081520_61	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0081520_64	PHROG	phrog_19458	primase	DNA, RNA and nucleotide metabolism
UHGV-0081520_64	UniRef90	UniRef90_A0A1C6H291	Antirestriction protein	NA
UHGV-0081520_64	eggNOG-mapper	445972.ANACOL_01830	NA	NA
UHGV-0081520_64	COG	COG4227	Antirestriction protein ArdC	NA
UHGV-0081520_65	PHROG	phrog_19490	NA	unknown function
UHGV-0081520_65	UniRef90	UniRef90_A0A373PRN0	Glutathione peroxidase	NA
UHGV-0081520_65	eggNOG-mapper	411459.RUMOBE_01110	NA	NA
UHGV-0081520_66	eggNOG-mapper	411459.RUMOBE_01111	NA	NA
UHGV-0081520_68	UniRef90	UniRef90_UPI001E563A8E	NA	NA
UHGV-0081520_68	eggNOG-mapper	515620.EUBELI_01204	NA	NA
UHGV-0081520_68	Pfam	PF18941	NA	DUF5688
UHGV-0081520_68	Structural annotation	PF18941, MF_01548, NF010189, COG4848	NA	NA
UHGV-0081520_69	PHROG	phrog_4400	NA	unknown function
UHGV-0081520_69	UniRef90	UniRef90_A8ATU1	Gp53	NA
UHGV-0081520_69	eggNOG-mapper	357809.Cphy_2990	NA	NA
UHGV-0081520_69	dbAPIS	APIS056	NA	NA
UHGV-0081520_69	Structural annotation	PF01743, MF_00957, NF008634, COG0617	NA	NA
UHGV-0081520_70	PHROG	phrog_17690	NA	unknown function
UHGV-0081520_70	eggNOG-mapper	665950.HMPREF1025_02546	NA	NA
UHGV-0081520_71	PHROG	phrog_15198	NA	unknown function
UHGV-0081520_71	UniRef90	UniRef90_UPI00164B94EC	NA	NA
UHGV-0081520_71	Pfam	PF04448	NA	DUF551
UHGV-0081520_72	eggNOG-mapper	457412.RSAG_01159	NA	NA
UHGV-0081520_73	PHROG	phrog_20593	NA	unknown function