UHGV-0081535

Genome information

Genome length 31,029 bps

CDS count 49

Completeness 84.79% (medium-quality)

geNomad score 0.9805

Prediction confidence Confident

Genome information
Genome ID	UHGV-0081535
vOTU ID	vOTU-034519
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_161482
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.79% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9805
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	43.38
Jumbo phage	No

Genome content
Genome length	31,029 bps
GC content	49.61%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	49
CDS density	92.03%
Average CDS length	585.80 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0081535_1	KOfam	K01990	ABC-2.A; ABC-2 type transport system ATP-binding protein	NA
UHGV-0081535_1	PHROG	phrog_293	ABC transporter	moron, auxiliary metabolic gene and host takeover
UHGV-0081535_1	UniRef90	UniRef90_A0A0F5PKY5	ABC-type multidrug transport system, ATPase component	NA
UHGV-0081535_1	eggNOG-mapper	411473.RUMCAL_00719	NA	NA
UHGV-0081535_1	Pfam	PF00005	ABC transporter	ABC_tran
UHGV-0081535_1	COG	COG1131	ABC-type multidrug transport system, ATPase component	NA
UHGV-0081535_2	eggNOG-mapper	634956.Geoth_0775	NA	NA
UHGV-0081535_3	PHROG	phrog_25567	NA	unknown function
UHGV-0081535_3	eggNOG-mapper	411469.EUBHAL_00738	NA	NA
UHGV-0081535_5	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0081535_5	PHROG	phrog_1794	amidase	lysis
UHGV-0081535_5	UniRef90	UniRef90_A0A374VU40	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0081535_5	eggNOG-mapper	411473.RUMCAL_00096	Ami_2	NA
UHGV-0081535_5	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0081535_5	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0081535_5	Structural annotation	PF01510, PF20780, MF_04111, NF008758, COG5632	NA	NA
UHGV-0081535_6	PHROG	phrog_443	holin	lysis
UHGV-0081535_6	UniRef90	UniRef90_R6R2Q3	Conserved domain protein	NA
UHGV-0081535_6	eggNOG-mapper	411490.ANACAC_00704	Putative lactococcus lactis phage r1t holin	NA
UHGV-0081535_6	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0081535_6	Structural annotation	PF16945	NA	NA
UHGV-0081535_8	PHROG	phrog_36886	NA	unknown function
UHGV-0081535_8	eggNOG-mapper	665956.HMPREF1032_02937	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0081535_8	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0081535_10	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0081535_10	UniRef90	UniRef90_A0A1G5CPJ5	Phage-related minor tail protein	NA
UHGV-0081535_10	eggNOG-mapper	573061.Clocel_3533	tail tape measure protein	NA
UHGV-0081535_10	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0081535_10	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0081535_10	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0081535_11	PHROG	phrog_706	NA	unknown function
UHGV-0081535_11	UniRef90	UniRef90_R6WB95	Bacteriophage Gp15 protein	NA
UHGV-0081535_11	eggNOG-mapper	411473.RUMCAL_01937	Bacteriophage Gp15 protein	NA
UHGV-0081535_11	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0081535_11	Structural annotation	PF06854	NA	NA
UHGV-0081535_12	PHROG	phrog_4450	NA	unknown function
UHGV-0081535_12	eggNOG-mapper	641112.ACOK01000073_gene2902	NA	NA
UHGV-0081535_12	Pfam	PF20378	NA	DUF6673
UHGV-0081535_12	Structural annotation	PF20378	NA	NA
UHGV-0081535_13	PHROG	phrog_3099	NA	unknown function
UHGV-0081535_13	eggNOG-mapper	411473.RUMCAL_01935	NA	NA
UHGV-0081535_13	Structural annotation	PF08813, TIGR02126, COG5437	NA	NA
UHGV-0081535_14	PHROG	phrog_3266	tail completion	connector
UHGV-0081535_14	UniRef90	UniRef90_A0A355UZ60	Chloramphenicol resistance protein	NA
UHGV-0081535_14	eggNOG-mapper	411473.RUMCAL_01934	NA	NA
UHGV-0081535_14	Structural annotation	PF12691	NA	NA
UHGV-0081535_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0081535_15	UniRef90	UniRef90_UPI00189988A1	minor capsid protein	NA
UHGV-0081535_15	eggNOG-mapper	1120746.CCNL01000014_gene2100	Minor capsid protein	NA
UHGV-0081535_15	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0081535_15	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0081535_16	PHROG	phrog_3366	NA	unknown function
UHGV-0081535_16	eggNOG-mapper	411473.RUMCAL_01932	NA	NA
UHGV-0081535_16	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0081535_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0081535_17	eggNOG-mapper	641112.ACOK01000073_gene2896	NA	NA
UHGV-0081535_18	PHROG	phrog_422	major head protein	head and packaging
UHGV-0081535_18	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-0081535_18	eggNOG-mapper	641112.ACOK01000073_gene2894	NA	NA
UHGV-0081535_18	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0081535_19	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0081535_19	UniRef90	UniRef90_R7FEY9	Phage minor structural protein GP20	NA
UHGV-0081535_19	eggNOG-mapper	641112.ACOK01000073_gene2893	Phage minor structural protein GP20	NA
UHGV-0081535_19	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0081535_20	PHROG	phrog_1048	NA	unknown function
UHGV-0081535_20	UniRef90	UniRef90_A0A3D5KWH4	NA	NA
UHGV-0081535_20	eggNOG-mapper	411473.RUMCAL_01927	NA	NA
UHGV-0081535_20	Pfam	PF11195	NA	DUF2829
UHGV-0081535_20	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0081535_20	Structural annotation	PF11195	NA	NA
UHGV-0081535_21	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0081535_21	UniRef90	UniRef90_U2K8C2	Phage minor capsid protein 2	NA
UHGV-0081535_21	eggNOG-mapper	411473.RUMCAL_01925	NA	NA
UHGV-0081535_21	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0081535_21	COG	COG2369	NA	NA
UHGV-0081535_21	Structural annotation	PF06152	NA	NA
UHGV-0081535_22	PHROG	phrog_533	portal protein	head and packaging
UHGV-0081535_22	UniRef90	UniRef90_UPI001C1263AE	phage portal protein	NA
UHGV-0081535_22	eggNOG-mapper	641112.ACOK01000073_gene2889	NA	NA
UHGV-0081535_22	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0081535_23	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0081535_23	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0081535_23	UniRef90	UniRef90_A0A3D5KXX3	PBSX family phage terminase large subunit	NA
UHGV-0081535_23	eggNOG-mapper	641112.ACOK01000073_gene2888	Phage terminase, large subunit, PBSX family	NA
UHGV-0081535_23	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0081535_23	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0081535_23	COG	COG1783	Phage terminase large subunit	NA
UHGV-0081535_23	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0081535_24	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0081535_24	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0081535_24	UniRef90	UniRef90_A0A174ZU67	Terminase small subunit	NA
UHGV-0081535_24	eggNOG-mapper	1160721.RBI_II00483	DNA packaging	NA
UHGV-0081535_24	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0081535_24	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0081535_24	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0081535_25	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0081535_27	UniRef90	UniRef90_R7GTQ1	NA	NA
UHGV-0081535_27	Pfam	PF04448	NA	DUF551
UHGV-0081535_29	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0081535_31	Structural annotation	PF04012	NA	NA
UHGV-0081535_32	PHROG	phrog_5070	NA	unknown function
UHGV-0081535_32	UniRef90	UniRef90_C6L9Y5	Bacterial transferase hexapeptide repeat protein	NA
UHGV-0081535_32	eggNOG-mapper	478749.BRYFOR_05427	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0081535_32	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0081535_32	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0081535_32	Structural annotation	MF_01691, NF040481	NA	NA
UHGV-0081535_33	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0081535_33	UniRef90	UniRef90_UPI001D02526C	NA	NA
UHGV-0081535_33	eggNOG-mapper	1035196.HMPREF9998_01736	NA	NA
UHGV-0081535_33	Pfam	PF06356	NA	DUF1064
UHGV-0081535_33	Structural annotation	PF06356	NA	NA
UHGV-0081535_34	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0081535_34	eggNOG-mapper	665956.HMPREF1032_02617	Phage replisome organizer, N-terminal domain protein	NA
UHGV-0081535_34	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0081535_34	Structural annotation	PF10771, MF_01177, TIGR01714, COG5529	NA	NA
UHGV-0081535_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0081535_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0081535_35	UniRef90	UniRef90_UPI001D0150B1	single-stranded DNA-binding protein	NA
UHGV-0081535_35	eggNOG-mapper	411473.RUMCAL_03263	Single-stranded DNA-binding protein	NA
UHGV-0081535_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0081535_35	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0081535_35	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0081535_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0081535_35	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0081535_36	PHROG	phrog_14970	NA	unknown function
UHGV-0081535_36	eggNOG-mapper	411468.CLOSCI_00315	double-strand break repair protein	NA
UHGV-0081535_36	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0081535_36	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0081535_46	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0081535_46	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0081535_46	UniRef90	UniRef90_R5ANG2	Phage antirepressor protein	NA
UHGV-0081535_46	eggNOG-mapper	1589751.A0A0C5AEJ9_9CAUD	DNA binding	NA
UHGV-0081535_46	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0081535_46	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0081535_46	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0081535_49	PHROG	phrog_1914	NA	unknown function
UHGV-0081535_49	UniRef90	UniRef90_R7FBB0	Putative toxin-antitoxin system toxin component	NA
UHGV-0081535_49	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0081535_49	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0081535_49	Structural annotation	PF06114, COG2856	NA	NA