UHGV-0082437

Genome information

Genome length 34,151 bps

CDS count 54

Completeness 81.60% (medium-quality)

geNomad score 0.9774

Prediction confidence Confident

Genome information
Genome ID	UHGV-0082437
vOTU ID	vOTU-036229
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_164260
BioSample	SAMEA3136640
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.60% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9774
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.27
Jumbo phage	No

Genome content
Genome length	34,151 bps
GC content	52.77%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	54
CDS density	91.26%
Average CDS length	581.67 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0082437_1	KOfam	K14059	int; integrase	NA
UHGV-0082437_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0082437_1	UniRef90	UniRef90_A0A3D3Y5E0	Integrase	NA
UHGV-0082437_1	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-0082437_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0082437_1	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0082437_1	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0082437_3	UniRef90	UniRef90_A0A6N6NJJ9	Helix-turn-helix transcriptional regulator	NA
UHGV-0082437_3	eggNOG-mapper	862908.BMS_1627	sequence-specific DNA binding	NA
UHGV-0082437_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0082437_3	COG	COG0662	Mannose-6-phosphate isomerase, cupin superfamily	NA
UHGV-0082437_6	PHROG	phrog_5319	outer membrane protein	other
UHGV-0082437_6	UniRef90	UniRef90_A0A3S1E765	Zinc ribbon domain-containing protein	NA
UHGV-0082437_6	eggNOG-mapper	521011.Mpal_1387	NA	NA
UHGV-0082437_6	Pfam	PF13248	zinc-ribbon domain	zf-ribbon_3
UHGV-0082437_6	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0082437_6	Structural annotation	PF03843, MF_01959, TIGR00752, NF041910, COG3390	NA	NA
UHGV-0082437_7	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0082437_9	UniRef90	UniRef90_A0A810QCI5	HTH cro/C1-type domain-containing protein	NA
UHGV-0082437_9	eggNOG-mapper	240292.Ava_C0229	Helix-turn-helix domain	NA
UHGV-0082437_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0082437_9	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0082437_9	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0082437_12	Structural annotation	NF041247	NA	NA
UHGV-0082437_15	Structural annotation	PF14634	NA	NA
UHGV-0082437_17	PHROG	phrog_27197	NA	unknown function
UHGV-0082437_17	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-0082437_17	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0082437_17	Structural annotation	NF007410	NA	NA
UHGV-0082437_18	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0082437_18	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-0082437_18	eggNOG-mapper	1329250.WOSG25_420010	ERF superfamily	NA
UHGV-0082437_18	Pfam	PF04404	ERF superfamily	ERF
UHGV-0082437_18	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0082437_20	PHROG	phrog_3136	NA	unknown function
UHGV-0082437_20	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0082437_20	eggNOG-mapper	198628.Dda3937_01763	ASCH	NA
UHGV-0082437_20	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0082437_20	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-0082437_23	UniRef90	UniRef90_A0A1C6DFA0	FAD-dependent thymidylate synthase	NA
UHGV-0082437_23	eggNOG-mapper	397290.C810_01371	NA	NA
UHGV-0082437_23	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0082437_23	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0082437_24	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0082437_24	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0082437_24	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0082437_27	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0082437_27	UniRef90	UniRef90_A0A316M891	NA	NA
UHGV-0082437_27	eggNOG-mapper	1244856.K4PY83_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-0082437_27	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0082437_27	Structural annotation	PF18909	NA	NA
UHGV-0082437_28	UniRef90	UniRef90_A0A285PYI3	Homeodomain-like domain	NA
UHGV-0082437_28	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0082437_28	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0082437_29	UniRef90	UniRef90_A0A3B9CD52	S1-like domain-containing protein	NA
UHGV-0082437_29	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-0082437_30	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0082437_30	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0082437_30	UniRef90	UniRef90_UPI0004D8B773	terminase small subunit	NA
UHGV-0082437_30	eggNOG-mapper	476272.RUMHYD_01754	Terminase small subunit	NA
UHGV-0082437_30	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0082437_30	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0082437_30	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0082437_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0082437_31	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0082437_31	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-0082437_31	eggNOG-mapper	1123511.KB905868_gene187	Phage terminase large subunit	NA
UHGV-0082437_31	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0082437_31	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0082437_31	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0082437_31	COG	COG1783	Phage terminase large subunit	NA
UHGV-0082437_31	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0082437_32	PHROG	phrog_533	portal protein	head and packaging
UHGV-0082437_32	UniRef90	UniRef90_UPI0006C81717	phage portal protein	NA
UHGV-0082437_32	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0082437_32	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0082437_32	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0082437_33	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0082437_33	UniRef90	UniRef90_UPI001D080D49	phage minor capsid protein	NA
UHGV-0082437_33	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0082437_33	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0082437_33	COG	COG2369	NA	NA
UHGV-0082437_33	Structural annotation	PF06152	NA	NA
UHGV-0082437_35	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0082437_35	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0082437_36	PHROG	phrog_10	major head protein	head and packaging
UHGV-0082437_36	UniRef90	UniRef90_A0A2U1BEF2	HK97 family phage major capsid protein	NA
UHGV-0082437_36	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0082437_36	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0082437_36	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0082437_36	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0082437_36	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0082437_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0082437_37	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0082437_38	PHROG	phrog_3366	NA	unknown function
UHGV-0082437_38	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0082437_38	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0082437_39	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0082437_39	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0082437_39	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0082437_39	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0082437_39	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0082437_40	PHROG	phrog_3266	tail completion	connector
UHGV-0082437_40	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0082437_40	Structural annotation	PF12691	NA	NA
UHGV-0082437_41	PHROG	phrog_3099	NA	unknown function
UHGV-0082437_41	eggNOG-mapper	693746.OBV_18150	NA	NA
UHGV-0082437_41	Structural annotation	TIGR02126	NA	NA
UHGV-0082437_42	PHROG	phrog_11299	NA	unknown function
UHGV-0082437_42	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0082437_42	Structural annotation	PF10666	NA	NA
UHGV-0082437_43	PHROG	phrog_706	NA	unknown function
UHGV-0082437_43	UniRef90	UniRef90_UPI000682A80B	Gp15 family bacteriophage protein	NA
UHGV-0082437_43	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0082437_43	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0082437_43	Structural annotation	PF06854	NA	NA
UHGV-0082437_44	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0082437_44	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0082437_44	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0082437_44	COG	COG1511	NA	NA
UHGV-0082437_44	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0082437_45	PHROG	phrog_1194	NA	unknown function
UHGV-0082437_45	eggNOG-mapper	411902.CLOBOL_00125	NA	NA
UHGV-0082437_45	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0082437_46	PHROG	phrog_13879	NA	unknown function
UHGV-0082437_46	eggNOG-mapper	1226322.HMPREF1545_00061	NA	NA
UHGV-0082437_46	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0082437_47	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0082437_48	PHROG	phrog_31538	NA	unknown function
UHGV-0082437_49	PHROG	phrog_13589	NA	unknown function
UHGV-0082437_49	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-0082437_50	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0082437_50	Pfam	PF19789	NA	DUF6273
UHGV-0082437_50	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0082437_51	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0082437_51	UniRef90	UniRef90_A0A3D4X8E3	Abi-like protein	NA
UHGV-0082437_51	eggNOG-mapper	877421.AUJT01000010_gene547	Abi-like protein	NA
UHGV-0082437_51	PADLOC	AbiD	AbiD	Abi
UHGV-0082437_51	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0082437_51	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0082437_51	Structural annotation	PF07751, COG4823	NA	NA
UHGV-0082437_52	KOfam	K14059	int; integrase	NA
UHGV-0082437_52	PHROG	phrog_1	integrase	integration and excision
UHGV-0082437_52	UniRef90	UniRef90_A0A2N1PFM3	Tyr recombinase domain-containing protein (Fragment)	NA
UHGV-0082437_52	eggNOG-mapper	693746.OBV_25530	Phage integrase family	NA
UHGV-0082437_52	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0082437_52	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0082437_53	KOfam	K14059	int; integrase	NA
UHGV-0082437_53	PHROG	phrog_1	integrase	integration and excision
UHGV-0082437_53	UniRef90	UniRef90_UPI00030B7B7C	tyrosine-type recombinase/integrase	NA
UHGV-0082437_53	eggNOG-mapper	1007096.BAGW01000023_gene159	Phage integrase family	NA
UHGV-0082437_53	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0082437_54	KOfam	K14059	int; integrase	NA
UHGV-0082437_54	PHROG	phrog_1	integrase	integration and excision
UHGV-0082437_54	UniRef90	UniRef90_A0A173RQD6	Tyrosine recombinase XerC	NA
UHGV-0082437_54	eggNOG-mapper	903814.ELI_0515	Site-specific recombinase, phage integrase family	NA
UHGV-0082437_54	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0082437_54	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0082437_54	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA