UHGV-0082784

Genome information

Genome length 19,793 bps

CDS count 24

Completeness 50.42% (medium-quality)

geNomad score 0.9818

Prediction confidence Confident

Genome information
Genome ID	UHGV-0082784
vOTU ID	vOTU-040501
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_166287
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.42% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9818
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.39
Jumbo phage	No

Genome content
Genome length	19,793 bps
GC content	42.97%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	24
CDS density	95.16%
Average CDS length	785.63 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0082784_1	eggNOG-mapper	411459.RUMOBE_00941	COG NOG22561 non supervised orthologous group	NA
UHGV-0082784_1	COG	COG0457	Tetratricopeptide (TPR) repeat	NA
UHGV-0082784_2	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0082784_2	UniRef90	UniRef90_A0A416Q1R7	Helix-turn-helix domain-containing protein	NA
UHGV-0082784_2	eggNOG-mapper	742733.HMPREF9469_01828	transposase activity	NA
UHGV-0082784_2	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0082784_2	Structural annotation	PF07141	NA	NA
UHGV-0082784_3	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0082784_3	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0082784_3	UniRef90	UniRef90_A0A415L5G2	Terminase	NA
UHGV-0082784_3	eggNOG-mapper	1304866.K413DRAFT_0811	Phage terminase, large subunit, PBSX family	NA
UHGV-0082784_3	COG	COG1783	Phage terminase large subunit	NA
UHGV-0082784_3	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0082784_4	PHROG	phrog_533	portal protein	head and packaging
UHGV-0082784_4	UniRef90	UniRef90_A0A1C5PI86	Phage portal protein, putative, A118 family	NA
UHGV-0082784_4	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0082784_4	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0082784_5	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0082784_5	UniRef90	UniRef90_A0A416Q253	Minor capsid protein	NA
UHGV-0082784_5	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-0082784_5	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0082784_5	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0082784_5	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-0082784_5	Structural annotation	PF06152	NA	NA
UHGV-0082784_7	PHROG	phrog_3675	NA	unknown function
UHGV-0082784_7	UniRef90	UniRef90_A0A416Q246	Dihydrolipoyl dehydrogenase	NA
UHGV-0082784_7	eggNOG-mapper	585501.HMPREF6123_0838	YjcQ protein	NA
UHGV-0082784_7	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-0082784_7	Structural annotation	PF09639, TIGR04176	NA	NA
UHGV-0082784_8	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0082784_8	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-0082784_8	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-0082784_9	PHROG	phrog_1048	NA	unknown function
UHGV-0082784_9	UniRef90	UniRef90_A0A396MNX1	NA	NA
UHGV-0082784_9	eggNOG-mapper	457412.RSAG_01107	NA	NA
UHGV-0082784_9	Pfam	PF11195	NA	DUF2829
UHGV-0082784_9	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0082784_9	Structural annotation	PF11195	NA	NA
UHGV-0082784_11	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0082784_11	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-0082784_12	PHROG	phrog_422	major head protein	head and packaging
UHGV-0082784_12	UniRef90	UniRef90_A0A414EG86	Phage capsid protein	NA
UHGV-0082784_12	eggNOG-mapper	663278.Ethha_1589	NA	NA
UHGV-0082784_12	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0082784_13	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0082784_13	eggNOG-mapper	742740.HMPREF9474_03507	NA	NA
UHGV-0082784_14	PHROG	phrog_8710	NA	unknown function
UHGV-0082784_14	eggNOG-mapper	742740.HMPREF9474_03508	NA	NA
UHGV-0082784_14	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0082784_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0082784_15	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-0082784_16	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0082784_16	UniRef90	UniRef90_UPI001C0EB705	minor capsid protein	NA
UHGV-0082784_16	eggNOG-mapper	483218.BACPEC_01150	NA	NA
UHGV-0082784_16	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0082784_16	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0082784_17	PHROG	phrog_820	major tail protein	tail
UHGV-0082784_17	eggNOG-mapper	33035.JPJF01000093_gene2246	NA	NA
UHGV-0082784_17	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0082784_18	PHROG	phrog_8300	NA	unknown function
UHGV-0082784_18	eggNOG-mapper	33035.JPJF01000093_gene2245	NA	NA
UHGV-0082784_18	Structural annotation	PF06854	NA	NA
UHGV-0082784_19	PHROG	phrog_8355	NA	unknown function
UHGV-0082784_19	UniRef90	UniRef90_UPI000E5D9789	Gp15 family bacteriophage protein	NA
UHGV-0082784_19	eggNOG-mapper	33035.JPJF01000093_gene2244	NA	NA
UHGV-0082784_20	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0082784_20	UniRef90	UniRef90_A0A1C5RGR7	Phage-related protein	NA
UHGV-0082784_20	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-0082784_20	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0082784_20	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0082784_21	PHROG	phrog_1194	NA	unknown function
UHGV-0082784_21	eggNOG-mapper	33035.JPJF01000093_gene2242	NA	NA
UHGV-0082784_21	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0082784_22	PHROG	phrog_6616	tail protein	tail
UHGV-0082784_22	UniRef90	UniRef90_A0A416Q215	Tail fiber domain-containing protein	NA
UHGV-0082784_22	eggNOG-mapper	476272.RUMHYD_01992	NA	NA
UHGV-0082784_22	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0082784_22	Structural annotation	PF05113, PF18432, NF033848, NF011735, COG4379	NA	NA
UHGV-0082784_23	PHROG	phrog_16164	NA	unknown function
UHGV-0082784_23	eggNOG-mapper	33035.JPJF01000093_gene2236	NA	NA
UHGV-0082784_23	Structural annotation	PF10651, NF032891	NA	NA