UHGV-0083757

Genome information

Genome length 19,890 bps

CDS count 29

Completeness 55.99% (medium-quality)

geNomad score 0.9799

Prediction confidence Confident

Genome information
Genome ID	UHGV-0083757
vOTU ID	vOTU-040822
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_161157
BioSample	SAMEA3136671
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.99% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9799
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.8
Jumbo phage	No

Genome content
Genome length	19,890 bps
GC content	56.62%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	29
CDS density	96.24%
Average CDS length	663.10 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0083757_1	PHROG	phrog_104	portal protein	head and packaging
UHGV-0083757_1	UniRef90	UniRef90_A0A6N8H2B6	Phage portal protein	NA
UHGV-0083757_1	eggNOG-mapper	748224.HMPREF9436_01468	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0083757_1	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0083757_2	PHROG	phrog_193	head maturation protease	head and packaging
UHGV-0083757_2	UniRef90	UniRef90_A0A6N8H118	CdiA_C domain-containing protein	NA
UHGV-0083757_2	eggNOG-mapper	748224.HMPREF9436_01469	NA	NA
UHGV-0083757_2	COG	COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	NA
UHGV-0083757_4	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0083757_4	UniRef90	UniRef90_A0A373Q857	YopX domain-containing protein	NA
UHGV-0083757_4	eggNOG-mapper	1123263.AUKY01000096_gene1821	NA	NA
UHGV-0083757_5	PHROG	phrog_774	NA	unknown function
UHGV-0083757_5	eggNOG-mapper	1042156.CXIVA_01820	NA	NA
UHGV-0083757_6	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0083757_6	UniRef90	UniRef90_D4K444	Phage minor structural protein GP20	NA
UHGV-0083757_6	eggNOG-mapper	748224.HMPREF9436_03336	Phage minor structural protein GP20	NA
UHGV-0083757_6	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0083757_6	Structural annotation	PF06810	NA	NA
UHGV-0083757_7	PHROG	phrog_10	major head protein	head and packaging
UHGV-0083757_7	UniRef90	UniRef90_A0A1Y4TJU9	Phage major capsid protein	NA
UHGV-0083757_7	eggNOG-mapper	748224.HMPREF9436_00690	Phage capsid family	NA
UHGV-0083757_7	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0083757_7	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0083757_7	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0083757_7	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0083757_9	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-0083757_9	UniRef90	UniRef90_E2ZGA8	Phage protein Gp19/Gp15/Gp42	NA
UHGV-0083757_9	Structural annotation	PF09355	NA	NA
UHGV-0083757_10	PHROG	phrog_501	head closure Hc1	connector
UHGV-0083757_10	eggNOG-mapper	748224.HMPREF9436_00693	NA	NA
UHGV-0083757_10	Structural annotation	PF12206, COG5614	NA	NA
UHGV-0083757_11	PHROG	phrog_387	neck protein	connector
UHGV-0083757_11	UniRef90	UniRef90_Q7Y4I0	Gp44	NA
UHGV-0083757_11	eggNOG-mapper	936375.HMPREF1152_0683	NA	NA
UHGV-0083757_12	PHROG	phrog_123	tail terminator	connector
UHGV-0083757_12	UniRef90	UniRef90_Q7Y4H9	Gp45	NA
UHGV-0083757_12	eggNOG-mapper	157924.Q7Y4H9_9CAUD	NA	NA
UHGV-0083757_12	Structural annotation	PF06141	NA	NA
UHGV-0083757_13	PHROG	phrog_117	major tail protein	tail
UHGV-0083757_13	UniRef90	UniRef90_A0A356C4M0	Phage tail protein	NA
UHGV-0083757_13	eggNOG-mapper	873448.STRPO_0291	NA	NA
UHGV-0083757_13	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0083757_14	PHROG	phrog_1526	NA	unknown function
UHGV-0083757_14	eggNOG-mapper	875454.BAEW01000017_gene1589	NA	NA
UHGV-0083757_15	PHROG	phrog_1633	NA	unknown function
UHGV-0083757_15	UniRef90	UniRef90_UPI0015CCAF51	NA	NA
UHGV-0083757_15	eggNOG-mapper	768726.HMPREF9178_1055	NA	NA
UHGV-0083757_15	Pfam	PF17318	NA	DUF5361
UHGV-0083757_15	Structural annotation	PF17318	NA	NA
UHGV-0083757_16	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0083757_16	UniRef90	UniRef90_A0A1C6EH41	Phage-related protein	NA
UHGV-0083757_16	eggNOG-mapper	748224.HMPREF9436_00699	Phage tail tape measure protein, TP901 family	NA
UHGV-0083757_16	COG	COG1511	NA	NA
UHGV-0083757_16	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0083757_17	PHROG	phrog_1194	NA	unknown function
UHGV-0083757_17	eggNOG-mapper	411471.SUBVAR_06933	NA	NA
UHGV-0083757_17	Structural annotation	PF20458, TIGR02126, COG4718	NA	NA
UHGV-0083757_18	PHROG	phrog_18190	NA	unknown function
UHGV-0083757_18	eggNOG-mapper	411471.SUBVAR_06932	NA	NA
UHGV-0083757_18	Structural annotation	PF05954, PF00629, PF03424, NF033848, NF033675, COG4379	NA	NA
UHGV-0083757_19	PHROG	phrog_18444	NA	unknown function
UHGV-0083757_19	UniRef90	UniRef90_UPI00156E9A45	peptide chain release factor 2	NA
UHGV-0083757_19	eggNOG-mapper	1294142.CINTURNW_1707	NA	NA
UHGV-0083757_21	Structural annotation	PF12245	NA	NA
UHGV-0083757_22	eggNOG-mapper	428125.CLOLEP_01433	NA	NA
UHGV-0083757_23	PHROG	phrog_13589	NA	unknown function
UHGV-0083757_23	eggNOG-mapper	742733.HMPREF9469_05009	NA	NA
UHGV-0083757_25	PHROG	phrog_19111	NA	unknown function
UHGV-0083757_25	eggNOG-mapper	756499.Desde_3162	nuclear chromosome segregation	NA
UHGV-0083757_25	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0083757_26	PHROG	phrog_24267	NA	unknown function
UHGV-0083757_26	eggNOG-mapper	508419.F8J176_9CAUD	peptidoglycan catabolic process	NA
UHGV-0083757_26	Pfam	PF11133	Head fiber protein	Phage_head_fibr
UHGV-0083757_26	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0083757_27	KOfam	K07273	acm; lysozyme	NA
UHGV-0083757_27	PHROG	phrog_291	endolysin	lysis
UHGV-0083757_27	UniRef90	UniRef90_A0A367G061	Peptidase_M23 domain-containing protein (Fragment)	NA
UHGV-0083757_27	eggNOG-mapper	411471.SUBVAR_06927	Glycosyl hydrolases family 25	NA
UHGV-0083757_27	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0083757_27	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0083757_27	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0083757_27	Structural annotation	PF01551, PF01183, NF040883, COG0739, COG3757	NA	NA
UHGV-0083757_28	PHROG	phrog_1863	NA	unknown function
UHGV-0083757_28	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-0083757_29	PHROG	phrog_1129	holin	lysis
UHGV-0083757_29	UniRef90	UniRef90_A0A367FT42	Enolase	NA
UHGV-0083757_29	eggNOG-mapper	693746.OBV_13280	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0083757_29	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0083757_29	Structural annotation	PF06946	NA	NA