UHGV-0083758

Genome information

vOTU vOTU-020505

Genome length 32,736 bps

CDS count 48

Completeness 86.64% (medium-quality)

geNomad score 0.9771

Prediction confidence Confident

Genome information
Genome ID	UHGV-0083758
vOTU ID	vOTU-020505
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_161160
BioSample	SAMEA3178943
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	86.64% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9771
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.52
Jumbo phage	No

Genome content
Genome length	32,736 bps
GC content	43.31%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	48
CDS density	95.77%
Average CDS length	655.31 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0083758_1	UniRef90	UniRef90_R5VU56	HTH_11 domain-containing protein	NA
UHGV-0083758_3	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0083758_3	UniRef90	UniRef90_A0A173W7Z3	Putative phage-type endonuclease	NA
UHGV-0083758_3	eggNOG-mapper	1095750.HMPREF9970_1677	YqaJ viral recombinase family	NA
UHGV-0083758_3	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0083758_3	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0083758_3	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0083758_3	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0083758_4	PHROG	phrog_674	NA	unknown function
UHGV-0083758_4	UniRef90	UniRef90_UPI00156D61E9	NA	NA
UHGV-0083758_4	eggNOG-mapper	1095750.HMPREF9970_1676	NA	NA
UHGV-0083758_4	Pfam	PF07083	NA	DUF1351
UHGV-0083758_4	Structural annotation	PF07083	NA	NA
UHGV-0083758_7	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0083758_7	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0083758_7	UniRef90	UniRef90_A0A173W8R4	p33	NA
UHGV-0083758_7	eggNOG-mapper	742765.HMPREF9457_02107	RecT family	NA
UHGV-0083758_7	Pfam	PF03837	RecT family	RecT
UHGV-0083758_7	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0083758_7	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0083758_7	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0083758_8	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0083758_8	UniRef90	UniRef90_A0A3R6WN18	NA	NA
UHGV-0083758_8	eggNOG-mapper	1236514.BAKL01000051_gene3708	NA	NA
UHGV-0083758_8	Pfam	PF06356	NA	DUF1064
UHGV-0083758_8	Structural annotation	PF06356	NA	NA
UHGV-0083758_9	PHROG	phrog_16304	NA	unknown function
UHGV-0083758_9	UniRef90	UniRef90_UPI000E7583BF	NA	NA
UHGV-0083758_9	eggNOG-mapper	445972.ANACOL_03338	DnaD domain protein	NA
UHGV-0083758_9	Pfam	PF19808	NA	DUF6291
UHGV-0083758_9	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0083758_9	Structural annotation	PF19808	NA	NA
UHGV-0083758_10	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0083758_10	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0083758_10	UniRef90	UniRef90_A0A173W8R8	Modification methylase MboII	NA
UHGV-0083758_10	eggNOG-mapper	1298920.KI911353_gene2709	DEAD-like helicases superfamily	NA
UHGV-0083758_10	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0083758_10	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0083758_10	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0083758_10	Structural annotation	PF01555, PF16203, PF04851, MF_01821, MF_00472, NF041790, NF008572, COG0553, COG0863	NA	NA
UHGV-0083758_11	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0083758_11	UniRef90	UniRef90_A0A2H4JC51	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0083758_11	eggNOG-mapper	411461.DORFOR_01142	NA	NA
UHGV-0083758_11	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0083758_11	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-0083758_13	Structural annotation	PF17655, MF_00791, TIGR03780, COG2967	NA	NA
UHGV-0083758_14	Structural annotation	PF06257, TIGR00739, COG4466	NA	NA
UHGV-0083758_16	PHROG	phrog_25456	NA	unknown function
UHGV-0083758_18	PHROG	phrog_20593	NA	unknown function
UHGV-0083758_19	PHROG	phrog_874	NA	unknown function
UHGV-0083758_19	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0083758_19	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0083758_20	PHROG	phrog_8684	NA	unknown function
UHGV-0083758_20	UniRef90	UniRef90_UPI000E7417AD	YopX family protein	NA
UHGV-0083758_20	eggNOG-mapper	742733.HMPREF9469_00912	YopX protein	NA
UHGV-0083758_20	Pfam	PF09643	YopX protein	YopX
UHGV-0083758_20	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0083758_20	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0083758_22	PHROG	phrog_17690	NA	unknown function
UHGV-0083758_22	UniRef90	UniRef90_A0A6L5XWF4	3-dehydroquinate synthase	NA
UHGV-0083758_22	eggNOG-mapper	33035.JPJF01000107_gene432	NA	NA
UHGV-0083758_23	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0083758_23	eggNOG-mapper	97138.C820_00221	sigma factor activity	NA
UHGV-0083758_23	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0083758_23	Structural annotation	PF07374, MF_00674, NF005248, COG2739	NA	NA
UHGV-0083758_25	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0083758_25	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0083758_25	UniRef90	UniRef90_A0A3R6PDT1	Terminase small subunit	NA
UHGV-0083758_25	eggNOG-mapper	1256908.HMPREF0373_00489	Terminase small subunit	NA
UHGV-0083758_25	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0083758_25	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0083758_25	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0083758_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0083758_26	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0083758_26	UniRef90	UniRef90_A0A822LI54	Terminase_3 domain-containing protein	NA
UHGV-0083758_26	eggNOG-mapper	1256908.HMPREF0373_00486	Phage terminase, large subunit, PBSX family	NA
UHGV-0083758_26	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0083758_26	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0083758_26	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0083758_26	COG	COG1783	Phage terminase large subunit	NA
UHGV-0083758_26	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0083758_27	PHROG	phrog_64	portal protein	head and packaging
UHGV-0083758_27	UniRef90	UniRef90_A0A3A6J7Z8	Phage portal protein	NA
UHGV-0083758_27	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0083758_27	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0083758_27	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0083758_28	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0083758_28	Structural annotation	PF10651	NA	NA
UHGV-0083758_30	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0083758_30	UniRef90	UniRef90_A0A8D9L2C5	NAD(+)--arginine ADP-ribosyltransferase EFV	NA
UHGV-0083758_30	eggNOG-mapper	1256908.HMPREF0373_00484	Phage Mu protein F like protein	NA
UHGV-0083758_30	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0083758_30	COG	COG2369	NA	NA
UHGV-0083758_30	Structural annotation	PF04233, PF15188, PF04002, TIGR01641, COG2369	NA	NA
UHGV-0083758_32	PHROG	phrog_872	NA	unknown function
UHGV-0083758_32	UniRef90	UniRef90_UPI0018C70BF8	NA	NA
UHGV-0083758_32	eggNOG-mapper	573413.Spirs_2170	NA	NA
UHGV-0083758_32	Pfam	PF11195	NA	DUF2829
UHGV-0083758_32	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0083758_32	Structural annotation	PF11195	NA	NA
UHGV-0083758_33	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0083758_33	UniRef90	UniRef90_UPI000E5C7AD7	phage scaffolding protein	NA
UHGV-0083758_33	eggNOG-mapper	1256908.HMPREF0373_00477	Phage minor structural protein GP20	NA
UHGV-0083758_33	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0083758_33	Structural annotation	PF06810	NA	NA
UHGV-0083758_34	PHROG	phrog_544	major head protein	head and packaging
UHGV-0083758_34	UniRef90	UniRef90_UPI001C0F52E5	N4-gp56 family major capsid protein	NA
UHGV-0083758_34	eggNOG-mapper	411471.SUBVAR_06940	NA	NA
UHGV-0083758_34	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0083758_34	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0083758_35	PHROG	phrog_1236	head protein	head and packaging
UHGV-0083758_35	eggNOG-mapper	1256908.HMPREF0373_00475	NA	NA
UHGV-0083758_35	Structural annotation	PF05135	NA	NA
UHGV-0083758_36	PHROG	phrog_1059	head-tail adaptor	connector
UHGV-0083758_36	UniRef90	UniRef90_A0A1C6E9J3	Bacteriophage head-tail adaptor	NA
UHGV-0083758_36	eggNOG-mapper	1256908.HMPREF0373_00474	NA	NA
UHGV-0083758_36	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0083758_37	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0083758_37	UniRef90	UniRef90_A0A416I9Q2	HK97 gp10 family phage protein	NA
UHGV-0083758_37	eggNOG-mapper	1256908.HMPREF0373_00473	NA	NA
UHGV-0083758_37	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0083758_38	PHROG	phrog_957	head protein	head and packaging
UHGV-0083758_38	eggNOG-mapper	1235800.C819_02229	NA	NA
UHGV-0083758_38	Structural annotation	PF12691	NA	NA
UHGV-0083758_39	PHROG	phrog_885	major tail protein	tail
UHGV-0083758_39	eggNOG-mapper	1256908.HMPREF0373_00471	NA	NA
UHGV-0083758_39	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0083758_40	PHROG	phrog_1021	NA	unknown function
UHGV-0083758_40	eggNOG-mapper	1256908.HMPREF0373_00470	NA	NA
UHGV-0083758_41	PHROG	phrog_1294	peptide methionine sulfoxide reductase	other
UHGV-0083758_42	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0083758_42	eggNOG-mapper	1123312.KB904569_gene357	Phage tail tape measure protein TP901	NA
UHGV-0083758_42	COG	COG5412	Phage-related protein	NA
UHGV-0083758_42	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0083758_43	UniRef90	UniRef90_UPI001EDCD142	phage tail family protein	NA
UHGV-0083758_43	eggNOG-mapper	1256908.HMPREF0373_00467	NA	NA
UHGV-0083758_43	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0083758_44	PHROG	phrog_538	minor tail protein	tail
UHGV-0083758_44	UniRef90	UniRef90_A0A1C5PP83	Phage-related holin (Lysis protein)	NA
UHGV-0083758_44	eggNOG-mapper	1256908.HMPREF0373_00466	NA	NA
UHGV-0083758_44	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0083758_44	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0083758_45	PHROG	phrog_9994	NA	unknown function
UHGV-0083758_45	UniRef90	UniRef90_A0A6L8RVX5	H_lectin domain-containing protein	NA
UHGV-0083758_45	eggNOG-mapper	1280698.AUJS01000007_gene1050	NA	NA
UHGV-0083758_45	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-0083758_45	Structural annotation	NF012201	NA	NA
UHGV-0083758_46	PHROG	phrog_1009	NA	unknown function
UHGV-0083758_46	UniRef90	UniRef90_A0A3A6JFT7	Branched-chain amino acid ABC transporter permease	NA
UHGV-0083758_46	eggNOG-mapper	742765.HMPREF9457_03364	NA	NA
UHGV-0083758_47	PHROG	phrog_18218	NA	unknown function
UHGV-0083758_47	UniRef90	UniRef90_A0A374AVT4	Ribonuclease	NA
UHGV-0083758_47	eggNOG-mapper	411474.COPEUT_02638	NA	NA
UHGV-0083758_47	Structural annotation	PF06946	NA	NA
UHGV-0083758_48	KOfam	K07273	acm; lysozyme	NA
UHGV-0083758_48	PHROG	phrog_291	endolysin	lysis
UHGV-0083758_48	UniRef90	UniRef90_A0A173W541	Lysozyme M1	NA
UHGV-0083758_48	eggNOG-mapper	411474.COPEUT_02639	hydrolase, family 25	NA
UHGV-0083758_48	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0083758_48	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0083758_48	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0083758_48	Structural annotation	PF01183, PF01476, TIGR02899, COG3757, COG1388	NA	NA