UHGV-0084689

Genome information

Genome length 58,920 bps

CDS count 86

Completeness 97.88% (high-quality)

geNomad score 0.9688

Prediction confidence Confident

Genome information
Genome ID	UHGV-0084689
vOTU ID	vOTU-067994
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_165934
BioSample	SAMEA3136670
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.88% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	32
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9688
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.5
Jumbo phage	No

Genome content
Genome length	58,920 bps
GC content	32.57%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	86
CDS density	92.30%
Average CDS length	635.90 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0084689_1	KOfam	K00034	gdh; glucose 1-dehydrogenase [EC:1.1.1.47]	NA
UHGV-0084689_1	UniRef90	UniRef90_R6TVH2	Short chain dehydrogenase	NA
UHGV-0084689_1	eggNOG-mapper	1235793.C809_00325	Enoyl-(Acyl carrier protein) reductase	NA
UHGV-0084689_1	Pfam	PF13561	Enoyl-(Acyl carrier protein) reductase	adh_short_C2
UHGV-0084689_1	COG	COG1028	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	NA
UHGV-0084689_2	KOfam	K14059	int; integrase	NA
UHGV-0084689_2	PHROG	phrog_1	integrase	integration and excision
UHGV-0084689_2	UniRef90	UniRef90_A0A1Y4SMD4	Tyr recombinase domain-containing protein	NA
UHGV-0084689_2	eggNOG-mapper	445974.CLORAM_02973	Belongs to the 'phage' integrase family	NA
UHGV-0084689_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0084689_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0084689_2	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0084689_10	PHROG	phrog_17256	NA	unknown function
UHGV-0084689_10	eggNOG-mapper	742733.HMPREF9469_05087	NA	NA
UHGV-0084689_12	PHROG	phrog_2152	NA	unknown function
UHGV-0084689_12	UniRef90	UniRef90_UPI0012B26DF8	NA	NA
UHGV-0084689_12	eggNOG-mapper	428125.CLOLEP_01358	NA	NA
UHGV-0084689_12	Pfam	PF19880	NA	DUF6353
UHGV-0084689_12	Structural annotation	PF19880	NA	NA
UHGV-0084689_14	PHROG	phrog_2152	NA	unknown function
UHGV-0084689_14	UniRef90	UniRef90_UPI0015711B45	NA	NA
UHGV-0084689_14	eggNOG-mapper	665956.HMPREF1032_00634	NA	NA
UHGV-0084689_14	Pfam	PF19880	NA	DUF6353
UHGV-0084689_14	Structural annotation	PF19880	NA	NA
UHGV-0084689_16	PHROG	phrog_4079	NA	unknown function
UHGV-0084689_16	eggNOG-mapper	428125.CLOLEP_01365	NA	NA
UHGV-0084689_17	PHROG	phrog_2152	NA	unknown function
UHGV-0084689_17	UniRef90	UniRef90_UPI001D085778	NA	NA
UHGV-0084689_17	eggNOG-mapper	665950.HMPREF1025_01949	NA	NA
UHGV-0084689_17	Pfam	PF19880	NA	DUF6353
UHGV-0084689_17	Structural annotation	PF19880	NA	NA
UHGV-0084689_19	PHROG	phrog_14968	NA	unknown function
UHGV-0084689_19	UniRef90	UniRef90_A0A3A9JBK4	Histidine kinase	NA
UHGV-0084689_19	eggNOG-mapper	742733.HMPREF9469_05071	NA	NA
UHGV-0084689_20	PHROG	phrog_4695	NA	unknown function
UHGV-0084689_20	eggNOG-mapper	742740.HMPREF9474_02307	NA	NA
UHGV-0084689_21	PHROG	phrog_4678	NA	unknown function
UHGV-0084689_21	eggNOG-mapper	742733.HMPREF9469_05069	NA	NA
UHGV-0084689_22	KOfam	K02319	pol; DNA polymerase, archaea type [EC:2.7.7.7]	NA
UHGV-0084689_22	PHROG	phrog_4210	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0084689_22	UniRef90	UniRef90_A0A1C5MXD1	DNA polymerase II	NA
UHGV-0084689_22	eggNOG-mapper	428125.CLOLEP_01375	DNA polymerase type-B family	NA
UHGV-0084689_22	Pfam	PF19263	NA	DUF5906
UHGV-0084689_22	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0084689_22	Structural annotation	PF00136, PF09250, MF_04100, TIGR00592, COG0417	NA	NA
UHGV-0084689_24	PHROG	phrog_4787	single strand annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0084689_24	eggNOG-mapper	478749.BRYFOR_08559	NA	NA
UHGV-0084689_24	Structural annotation	PF21265, MF_04153	NA	NA
UHGV-0084689_25	PHROG	phrog_19852	NA	unknown function
UHGV-0084689_25	eggNOG-mapper	742733.HMPREF9469_05061	NA	NA
UHGV-0084689_27	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0084689_27	UniRef90	UniRef90_A0A7X4ZP73	Helicase C-terminal domain-containing protein	NA
UHGV-0084689_27	eggNOG-mapper	411460.RUMTOR_01381	Helicase conserved C-terminal domain	NA
UHGV-0084689_27	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0084689_27	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0084689_27	Structural annotation	PF16203, MF_01489, NF038318, COG0553	NA	NA
UHGV-0084689_28	PHROG	phrog_20637	NA	unknown function
UHGV-0084689_28	UniRef90	UniRef90_A0A1C6AAG6	Ntox50 domain-containing protein	NA
UHGV-0084689_28	eggNOG-mapper	411460.RUMTOR_01376	NA	NA
UHGV-0084689_28	Pfam	PF18907	NA	DUF5662
UHGV-0084689_28	Structural annotation	PF18907	NA	NA
UHGV-0084689_34	PHROG	phrog_474	phosphofructokinase	other
UHGV-0084689_34	UniRef90	UniRef90_G9RWI8	NA	NA
UHGV-0084689_34	eggNOG-mapper	428125.CLOLEP_01367	NA	NA
UHGV-0084689_34	Pfam	PF19905	NA	DUF6378
UHGV-0084689_40	eggNOG-mapper	1453496.AT03_13425	NA	NA
UHGV-0084689_43	PHROG	phrog_6721	NA	unknown function
UHGV-0084689_43	eggNOG-mapper	742740.HMPREF9474_02288	NA	NA
UHGV-0084689_43	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0084689_54	eggNOG-mapper	1497679.EP56_01765	Peptidase family M23	NA
UHGV-0084689_54	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0084689_57	KOfam	K07559	kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]	NA
UHGV-0084689_57	PHROG	phrog_5470	RNA 2'-phosphotransferase	DNA, RNA and nucleotide metabolism
UHGV-0084689_57	UniRef90	UniRef90_A0A2T3G0S7	Probable RNA 2'-phosphotransferase	NA
UHGV-0084689_57	eggNOG-mapper	641112.ACOK01000108_gene1826	RNA 2'-phosphotransferase, Tpt1 / KptA family	NA
UHGV-0084689_57	Pfam	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family	PTS_2-RNA
UHGV-0084689_57	COG	COG1859	RNA:NAD 2'-phosphotransferase, TPT1/KptA family	NA
UHGV-0084689_60	eggNOG-mapper	742740.HMPREF9474_02280	NA	NA
UHGV-0084689_60	Structural annotation	PF01870, COG1591	NA	NA
UHGV-0084689_61	PHROG	phrog_3953	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0084689_61	UniRef90	UniRef90_A0A3A9IQR6	NA	NA
UHGV-0084689_61	eggNOG-mapper	742733.HMPREF9469_05040	NA	NA
UHGV-0084689_61	Pfam	PF10926	NA	DUF2800
UHGV-0084689_61	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-0084689_62	PHROG	phrog_4291	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0084689_62	UniRef90	UniRef90_UPI00164A4E44	helix-turn-helix domain-containing protein	NA
UHGV-0084689_62	eggNOG-mapper	742733.HMPREF9469_05039	NA	NA
UHGV-0084689_62	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0084689_62	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0084689_62	Structural annotation	PF05183	NA	NA
UHGV-0084689_63	PHROG	phrog_4303	NA	unknown function
UHGV-0084689_63	eggNOG-mapper	742733.HMPREF9469_05038	NA	NA
UHGV-0084689_64	PHROG	phrog_4259	NA	unknown function
UHGV-0084689_64	eggNOG-mapper	691965.D4P7B9_9CAUD	NA	NA
UHGV-0084689_65	PHROG	phrog_4321	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0084689_65	eggNOG-mapper	665956.HMPREF1032_00668	NA	NA
UHGV-0084689_66	PHROG	phrog_4247	virion structural protein	head and packaging
UHGV-0084689_66	eggNOG-mapper	742733.HMPREF9469_05035	NA	NA
UHGV-0084689_67	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0084689_67	UniRef90	UniRef90_A0A1Y4SQ45	Terminase	NA
UHGV-0084689_67	eggNOG-mapper	742740.HMPREF9474_02272	Phage Terminase	NA
UHGV-0084689_67	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0084689_67	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0084689_67	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0084689_67	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0084689_68	PHROG	phrog_7021	NA	unknown function
UHGV-0084689_68	eggNOG-mapper	478749.BRYFOR_08525	NA	NA
UHGV-0084689_69	eggNOG-mapper	1410661.JNKW01000005_gene22	NA	NA
UHGV-0084689_71	PHROG	phrog_12	portal protein	head and packaging
UHGV-0084689_71	UniRef90	UniRef90_A0A7V7AAV0	Phage portal protein	NA
UHGV-0084689_71	eggNOG-mapper	428125.CLOLEP_01411	Phage portal protein	NA
UHGV-0084689_71	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0084689_71	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0084689_72	KOfam	K06904	NA	NA
UHGV-0084689_72	PHROG	phrog_3270	head maturation protease	head and packaging
UHGV-0084689_72	UniRef90	UniRef90_UPI0011C981B5	HK97 family phage prohead protease	NA
UHGV-0084689_72	eggNOG-mapper	428125.CLOLEP_01412	Caudovirus prohead serine protease	NA
UHGV-0084689_72	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0084689_72	Structural annotation	PF04586, PF06673, TIGR01543, TIGR01554, COG3740, COG4653	NA	NA
UHGV-0084689_73	PHROG	phrog_4270	NA	unknown function
UHGV-0084689_73	eggNOG-mapper	478749.BRYFOR_08520	NA	NA
UHGV-0084689_73	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0084689_74	PHROG	phrog_78	tail terminator	connector
UHGV-0084689_74	eggNOG-mapper	478749.BRYFOR_08519	NA	NA
UHGV-0084689_74	Structural annotation	PF20765	NA	NA
UHGV-0084689_75	PHROG	phrog_2645	major tail protein	tail
UHGV-0084689_75	UniRef90	UniRef90_A0A2L1IW72	Major tail protein	NA
UHGV-0084689_75	eggNOG-mapper	742740.HMPREF9474_02267	NA	NA
UHGV-0084689_75	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0084689_76	PHROG	phrog_4282	NA	unknown function
UHGV-0084689_76	eggNOG-mapper	742740.HMPREF9474_02266	NA	NA
UHGV-0084689_77	PHROG	phrog_4338	NA	unknown function
UHGV-0084689_77	eggNOG-mapper	665950.HMPREF1025_02004	NA	NA
UHGV-0084689_78	PHROG	phrog_21357	endolysin	lysis
UHGV-0084689_78	UniRef90	UniRef90_A0A6N3AE03	Bacterial SH3 domain protein	NA
UHGV-0084689_78	eggNOG-mapper	428126.CLOSPI_02072	lysozyme activity	NA
UHGV-0084689_78	Pfam	PF05257	CHAP domain	CHAP
UHGV-0084689_78	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0084689_78	COG	COG1388	LysM repeat	NA
UHGV-0084689_78	Structural annotation	PF10030, TIGR02594, COG4991, COG3942	NA	NA
UHGV-0084689_79	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0084689_79	UniRef90	UniRef90_UPI001D0673C2	HK97 gp10 family phage protein	NA
UHGV-0084689_79	eggNOG-mapper	742733.HMPREF9469_05021	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0084689_79	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0084689_79	Structural annotation	TIGR01725	NA	NA
UHGV-0084689_80	PHROG	phrog_4372	tail length tape measure protein	tail
UHGV-0084689_80	UniRef90	UniRef90_UPI0018AC889D	tape measure protein	NA
UHGV-0084689_80	eggNOG-mapper	478749.BRYFOR_08513	Peptidoglycan-binding domain 1 protein	NA
UHGV-0084689_80	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0084689_80	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0084689_80	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0084689_80	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0084689_81	PHROG	phrog_202	distal tail protein Dit	tail
UHGV-0084689_81	UniRef90	UniRef90_A0A174PQE5	Phage-related protein	NA
UHGV-0084689_81	eggNOG-mapper	411470.RUMGNA_02229	NA	NA
UHGV-0084689_81	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0084689_81	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0084689_81	COG	COG4722	Phage-related protein YomH	NA
UHGV-0084689_81	Structural annotation	PF05709, PF21708, TIGR01633, NF041449, COG4722, COG3506	NA	NA
UHGV-0084689_82	KOfam	K10352	MYH9s; myosin heavy chain 9/10/11/14	NA
UHGV-0084689_82	PHROG	phrog_9478	minor tail protein	tail
UHGV-0084689_82	UniRef90	UniRef90_A0A2T3G2E5	Peptidase S74 domain-containing protein	NA
UHGV-0084689_82	eggNOG-mapper	476272.RUMHYD_02865	NA	NA
UHGV-0084689_82	Pfam	PF11839	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
UHGV-0084689_82	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0084689_82	Structural annotation	PF14594, PF00529, TIGR01665, TIGR02971, COG4926	NA	NA
UHGV-0084689_83	PHROG	phrog_2566	NA	unknown function
UHGV-0084689_83	eggNOG-mapper	1449342.JQMR01000001_gene983	NA	NA
UHGV-0084689_84	PHROG	phrog_1401	NA	unknown function
UHGV-0084689_84	UniRef90	UniRef90_UPI001CC36A2F	NA	NA
UHGV-0084689_84	eggNOG-mapper	1391647.AVSV01000003_gene1820	NA	NA
UHGV-0084689_84	Structural annotation	PF07761	NA	NA
UHGV-0084689_85	PHROG	phrog_199	holin	lysis
UHGV-0084689_85	UniRef90	UniRef90_UPI00067F5C68	phage holin family protein	NA
UHGV-0084689_85	eggNOG-mapper	272563.CD630_06610	Bacteriophage holin family	NA
UHGV-0084689_85	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0084689_85	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0084689_85	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0084689_85	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0084689_86	eggNOG-mapper	1504823.CCMM01000013_gene2395	imidazolonepropionase activity	NA
UHGV-0084689_86	COG	COG1228	Imidazolonepropionase or related amidohydrolase	NA