UHGV-0085661

Genome information

Genome length 25,116 bps

CDS count 32

Completeness 63.72% (medium-quality)

geNomad score 0.9522

Prediction confidence Confident

Genome information
Genome ID	UHGV-0085661
vOTU ID	vOTU-016786
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_160645
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.72% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9522
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.52
Jumbo phage	No

Genome content
Genome length	25,116 bps
GC content	36.22%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	32
CDS density	96.48%
Average CDS length	758.91 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0085661_1	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0085661_1	PHROG	phrog_3088	amidase	lysis
UHGV-0085661_1	UniRef90	UniRef90_A0A6G2CIG0	SPOR domain-containing protein	NA
UHGV-0085661_1	eggNOG-mapper	702450.CUW_0552	Ami_2	NA
UHGV-0085661_1	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0085661_1	Pfam	PF05036	SPOR domain	SPOR
UHGV-0085661_1	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0085661_1	Structural annotation	PF01510, PF08460, MF_04111, NF008758, COG5632	NA	NA
UHGV-0085661_2	PHROG	phrog_1129	holin	lysis
UHGV-0085661_2	UniRef90	UniRef90_A0A6A8SI90	Holin	NA
UHGV-0085661_2	eggNOG-mapper	702450.CUW_0551	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0085661_2	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0085661_2	Structural annotation	PF06946	NA	NA
UHGV-0085661_3	eggNOG-mapper	1280689.AUJC01000007_gene3301	NA	NA
UHGV-0085661_4	PHROG	phrog_16267	NA	unknown function
UHGV-0085661_4	UniRef90	UniRef90_UPI0006C42AEC	phage tail protein	NA
UHGV-0085661_4	eggNOG-mapper	702450.CUW_0547	NA	NA
UHGV-0085661_4	COG	COG4926	Phage-related protein	NA
UHGV-0085661_5	PHROG	phrog_1194	NA	unknown function
UHGV-0085661_5	UniRef90	UniRef90_D7RWK1	Gp18	NA
UHGV-0085661_5	eggNOG-mapper	702450.CUW_0546	NA	NA
UHGV-0085661_5	Pfam	PF20458	NA	DUF6711
UHGV-0085661_5	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0085661_6	PHROG	phrog_1401	NA	unknown function
UHGV-0085661_6	UniRef90	UniRef90_A0A6I1BH53	PRK domain-containing protein	NA
UHGV-0085661_6	eggNOG-mapper	702450.CUW_0545	NA	NA
UHGV-0085661_6	Pfam	PF00485	Phosphoribulokinase / Uridine kinase family	PRK
UHGV-0085661_6	Structural annotation	PF07761	NA	NA
UHGV-0085661_7	PHROG	phrog_2566	NA	unknown function
UHGV-0085661_7	UniRef90	UniRef90_A8U7X4	Lj965 prophage protein	NA
UHGV-0085661_7	eggNOG-mapper	702450.CUW_0544	NA	NA
UHGV-0085661_8	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0085661_8	UniRef90	UniRef90_UPI000C0860A2	phage tail tape measure protein	NA
UHGV-0085661_8	eggNOG-mapper	702450.CUW_0543	phage tail tape measure protein	NA
UHGV-0085661_8	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0085661_8	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0085661_9	PHROG	phrog_2066	NA	unknown function
UHGV-0085661_9	eggNOG-mapper	702450.CUW_0542	NA	NA
UHGV-0085661_10	UniRef90	UniRef90_A0A0Z7ZZR4	NA	NA
UHGV-0085661_10	eggNOG-mapper	1211844.CBLM010000016_gene1484	NA	NA
UHGV-0085661_10	Pfam	PF19591	NA	DUF6096
UHGV-0085661_10	Structural annotation	PF19591, TIGR01674	NA	NA
UHGV-0085661_11	UniRef90	UniRef90_A0A7Z7CEA8	Phage tail tube protein, TTP	NA
UHGV-0085661_11	eggNOG-mapper	702450.CUW_0540	Phage tail tube protein, TTP	NA
UHGV-0085661_13	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0085661_13	UniRef90	UniRef90_UPI000C085217	HK97 gp10 family phage protein	NA
UHGV-0085661_13	eggNOG-mapper	268407.PWYN_03010	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0085661_16	PHROG	phrog_422	major head protein	head and packaging
UHGV-0085661_16	UniRef90	UniRef90_A0A6I1BH44	Capsid protein	NA
UHGV-0085661_16	eggNOG-mapper	1280692.AUJL01000025_gene2079	NA	NA
UHGV-0085661_16	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0085661_17	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0085661_17	UniRef90	UniRef90_A0A6I1BD58	NA	NA
UHGV-0085661_17	eggNOG-mapper	1280689.AUJC01000003_gene966	NA	NA
UHGV-0085661_17	Pfam	PF14265	NA	DUF4355
UHGV-0085661_17	Structural annotation	PF14265	NA	NA
UHGV-0085661_18	PHROG	phrog_872	NA	unknown function
UHGV-0085661_18	UniRef90	UniRef90_A0A6I1BKP0	NA	NA
UHGV-0085661_18	eggNOG-mapper	1280692.AUJL01000027_gene2162	NA	NA
UHGV-0085661_18	Pfam	PF11195	NA	DUF2829
UHGV-0085661_18	dbAPIS	APIS029	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	NA
UHGV-0085661_19	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0085661_19	UniRef90	UniRef90_A0A6I1BEW6	Phage_Mu_F domain-containing protein	NA
UHGV-0085661_19	eggNOG-mapper	702450.CUW_0533	cell adhesion	NA
UHGV-0085661_19	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0085661_19	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0085661_19	COG	COG2369	NA	NA
UHGV-0085661_19	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0085661_20	PHROG	phrog_64	portal protein	head and packaging
UHGV-0085661_20	UniRef90	UniRef90_A0A6I1BIF6	Phage portal protein	NA
UHGV-0085661_20	eggNOG-mapper	1123250.KB908417_gene647	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0085661_20	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0085661_20	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0085661_20	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0085661_21	PHROG	phrog_30251	terminase large subunit	head and packaging
UHGV-0085661_21	UniRef90	UniRef90_A0A6I1BFX3	Phage terminase large subunit	NA
UHGV-0085661_21	eggNOG-mapper	1280692.AUJL01000025_gene2084	TIGRFAM Phage	NA
UHGV-0085661_21	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0085661_21	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0085661_21	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0085661_21	COG	COG5410	NA	NA
UHGV-0085661_21	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0085661_22	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0085661_22	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0085661_22	UniRef90	UniRef90_A0A6I1BDH3	Terminase small subunit	NA
UHGV-0085661_22	eggNOG-mapper	702450.CUW_0530	Terminase Small Subunit	NA
UHGV-0085661_22	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0085661_22	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0085661_22	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0085661_24	Structural annotation	PF06530, MF_00245, NF008895, COG1595	NA	NA
UHGV-0085661_25	KOfam	K17080	PHB1; prohibitin 1	NA
UHGV-0085661_25	PHROG	phrog_200	lipoprotein	other
UHGV-0085661_25	UniRef90	UniRef90_A0A844JUB3	Prohibitin family protein	NA
UHGV-0085661_25	eggNOG-mapper	702450.CUW_0416	COG0330 Membrane protease subunits stomatin prohibitin homologs	NA
UHGV-0085661_25	Pfam	PF01145	SPFH domain / Band 7 family	Band_7
UHGV-0085661_25	COG	COG0330	Regulator of protease activity HflC, stomatin/prohibitin superfamily	NA
UHGV-0085661_25	Structural annotation	PF01145, MF_01562, NF008181, COG0330	NA	NA
UHGV-0085661_26	UniRef90	UniRef90_A0A0H3KJ17	Putative bacteriophage protein	NA
UHGV-0085661_26	eggNOG-mapper	948106.AWZT01000001_gene5157	NA	NA
UHGV-0085661_29	PHROG	phrog_4643	NA	unknown function
UHGV-0085661_31	PHROG	phrog_3032	NA	unknown function