UHGV-0085727

Genome information

Genome length 33,117 bps

CDS count 50

Completeness 90.95% (high-quality)

geNomad score 0.9771

Prediction confidence Confident

Genome information
Genome ID	UHGV-0085727
vOTU ID	vOTU-068824
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_162194
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.95% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9771
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.35
Jumbo phage	No

Genome content
Genome length	33,117 bps
GC content	43.81%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	89.80%
Average CDS length	599.40 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0085727_3	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-0085727_3	PHROG	phrog_6320	tail fiber protein	tail
UHGV-0085727_3	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0085727_4	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-0085727_4	PHROG	phrog_819	tail protein	tail
UHGV-0085727_4	UniRef90	UniRef90_A0A416P548	Collagen-like protein	NA
UHGV-0085727_4	eggNOG-mapper	290402.Cbei_3387	NA	NA
UHGV-0085727_4	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0085727_5	PHROG	phrog_538	minor tail protein	tail
UHGV-0085727_5	UniRef90	UniRef90_UPI0005A8CFC8	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0085727_5	eggNOG-mapper	33035.JPJF01000033_gene2262	NA	NA
UHGV-0085727_5	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0085727_5	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0085727_6	PHROG	phrog_5339	virion structural protein	head and packaging
UHGV-0085727_6	UniRef90	UniRef90_A0A0U2WUF0	Phage-related protein	NA
UHGV-0085727_6	eggNOG-mapper	1499683.CCFF01000017_gene2563	COG NOG18825 non supervised orthologous group	NA
UHGV-0085727_6	Structural annotation	PF21567	NA	NA
UHGV-0085727_7	PHROG	phrog_36410	NA	unknown function
UHGV-0085727_7	UniRef90	UniRef90_A0A416P582	Phage tail family protein	NA
UHGV-0085727_7	eggNOG-mapper	33035.JPJF01000033_gene2264	PFAM Phage tail protein	NA
UHGV-0085727_7	COG	COG4722	Phage-related protein YomH	NA
UHGV-0085727_7	Structural annotation	PF16774, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0085727_8	PHROG	phrog_19074	NA	unknown function
UHGV-0085727_8	UniRef90	UniRef90_A0A416P6B8	Phage tail tape measure protein	NA
UHGV-0085727_8	eggNOG-mapper	33035.JPJF01000033_gene2265	Phage-related minor tail protein	NA
UHGV-0085727_8	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0085727_8	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0085727_8	COG	COG5283	Phage-related tail protein	NA
UHGV-0085727_8	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0085727_9	PHROG	phrog_706	NA	unknown function
UHGV-0085727_9	UniRef90	UniRef90_A0A174B750	Bacteriophage Gp15 protein	NA
UHGV-0085727_9	eggNOG-mapper	33035.JPJF01000033_gene2266	COG NOG24969 non supervised orthologous group	NA
UHGV-0085727_9	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0085727_9	Structural annotation	PF06854	NA	NA
UHGV-0085727_10	PHROG	phrog_4450	NA	unknown function
UHGV-0085727_10	eggNOG-mapper	545697.HMPREF0216_02856	NA	NA
UHGV-0085727_10	Pfam	PF20378	NA	DUF6673
UHGV-0085727_11	PHROG	phrog_3099	NA	unknown function
UHGV-0085727_11	UniRef90	UniRef90_A0A3P6KYP0	Phage capsid family protein	NA
UHGV-0085727_11	eggNOG-mapper	742723.HMPREF9477_00900	NA	NA
UHGV-0085727_11	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0085727_12	PHROG	phrog_3266	tail completion	connector
UHGV-0085727_12	UniRef90	UniRef90_A0A7X2NE02	Chloramphenicol resistance protein	NA
UHGV-0085727_12	eggNOG-mapper	33035.JPJF01000033_gene2269	NA	NA
UHGV-0085727_12	Structural annotation	PF12691	NA	NA
UHGV-0085727_13	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0085727_13	UniRef90	UniRef90_A0A373JC64	Capsid protein	NA
UHGV-0085727_13	eggNOG-mapper	742723.HMPREF9477_00902	Minor capsid protein	NA
UHGV-0085727_13	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0085727_13	Structural annotation	PF11114	NA	NA
UHGV-0085727_14	PHROG	phrog_3366	NA	unknown function
UHGV-0085727_14	eggNOG-mapper	411462.DORLON_00784	NA	NA
UHGV-0085727_14	Pfam	PF20536	NA	DUF6751
UHGV-0085727_14	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0085727_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0085727_15	eggNOG-mapper	411470.RUMGNA_02220	NA	NA
UHGV-0085727_15	Structural annotation	PF05135	NA	NA
UHGV-0085727_16	PHROG	phrog_422	major head protein	head and packaging
UHGV-0085727_16	eggNOG-mapper	742765.HMPREF9457_02127	NA	NA
UHGV-0085727_16	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0085727_17	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0085727_17	UniRef90	UniRef90_A0A1C5W5U5	Phage minor structural protein GP20	NA
UHGV-0085727_17	eggNOG-mapper	742765.HMPREF9457_02126	COG NOG36366 non supervised orthologous group	NA
UHGV-0085727_17	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0085727_17	Structural annotation	PF06810	NA	NA
UHGV-0085727_18	eggNOG-mapper	742765.HMPREF9457_02124	NA	NA
UHGV-0085727_19	PHROG	phrog_21033	NA	unknown function
UHGV-0085727_19	UniRef90	UniRef90_A0A416P6S3	Minor capsid protein	NA
UHGV-0085727_19	eggNOG-mapper	411461.DORFOR_00748	NA	NA
UHGV-0085727_19	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0085727_19	COG	COG2369	NA	NA
UHGV-0085727_20	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0085727_20	UniRef90	UniRef90_UPI001D0ED280	AP2 domain-containing protein	NA
UHGV-0085727_20	eggNOG-mapper	411462.DORLON_00791	NA	NA
UHGV-0085727_20	AcrCatalog	cluster_5564	NA	NA
UHGV-0085727_20	Structural annotation	PF00847, PF18115	NA	NA
UHGV-0085727_23	UniRef90	UniRef90_UPI001D0E5D20	CopG family transcriptional regulator	NA
UHGV-0085727_23	Structural annotation	PF01402, NF041793, COG4453	NA	NA
UHGV-0085727_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0085727_24	UniRef90	UniRef90_UPI001D0E5919	phage minor capsid protein	NA
UHGV-0085727_24	eggNOG-mapper	742723.HMPREF9477_00909	Phage minor capsid protein 2	NA
UHGV-0085727_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0085727_24	COG	COG2369	NA	NA
UHGV-0085727_24	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-0085727_25	PHROG	phrog_533	portal protein	head and packaging
UHGV-0085727_25	UniRef90	UniRef90_A0A416P5E9	Phage capsid protein	NA
UHGV-0085727_25	eggNOG-mapper	742765.HMPREF9457_02120	NA	NA
UHGV-0085727_25	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0085727_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0085727_26	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0085727_26	UniRef90	UniRef90_A0A416P592	PBSX family phage terminase large subunit	NA
UHGV-0085727_26	eggNOG-mapper	742765.HMPREF9457_02119	Terminase-like family	NA
UHGV-0085727_26	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0085727_26	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0085727_26	COG	COG1783	Phage terminase large subunit	NA
UHGV-0085727_27	PHROG	phrog_2412	NA	unknown function
UHGV-0085727_27	UniRef90	UniRef90_UPI001E414EFE	KGG domain-containing protein	NA
UHGV-0085727_27	eggNOG-mapper	742765.HMPREF9457_02118	NA	NA
UHGV-0085727_28	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0085727_28	UniRef90	UniRef90_A0A416P599	RNA polymerase subunit sigma-70	NA
UHGV-0085727_28	eggNOG-mapper	1235798.C817_03486	NA	NA
UHGV-0085727_28	Structural annotation	PF02996	NA	NA
UHGV-0085727_32	PHROG	phrog_8841	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0085727_32	UniRef90	UniRef90_UPI001D0E7B86	NA	NA
UHGV-0085727_32	eggNOG-mapper	476272.RUMHYD_01742	NA	NA
UHGV-0085727_32	Pfam	PF06048	NA	DUF927
UHGV-0085727_32	Pfam	PF18662	Cch helix turn helix domain	HTH_56
UHGV-0085727_32	COG	COG5519	NA	NA
UHGV-0085727_32	Structural annotation	PF06048, PF18662, MF_00016, NF011296, COG5519	NA	NA
UHGV-0085727_33	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0085727_33	PHROG	phrog_11992	NA	unknown function
UHGV-0085727_33	UniRef90	UniRef90_UPI001D0EB8AA	CHC2 zinc finger domain-containing protein	NA
UHGV-0085727_33	eggNOG-mapper	476272.RUMHYD_01741	CHC2 zinc finger	NA
UHGV-0085727_33	PADLOC	drt-UG29	DRT	DRT
UHGV-0085727_33	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0085727_33	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0085727_33	Structural annotation	PF01807, PF00401	NA	NA
UHGV-0085727_34	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0085727_34	UniRef90	UniRef90_A0A1C5UKT4	ERCC4 domain-containing protein	NA
UHGV-0085727_34	eggNOG-mapper	658655.HMPREF0988_02583	ERCC4 domain	NA
UHGV-0085727_34	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0085727_34	Structural annotation	PF03834, NF040956, COG1948	NA	NA
UHGV-0085727_35	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0085727_35	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0085727_35	UniRef90	UniRef90_UPI001D0DFE90	single-stranded DNA-binding protein	NA
UHGV-0085727_35	eggNOG-mapper	411460.RUMTOR_02067	NA	NA
UHGV-0085727_35	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0085727_35	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0085727_35	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0085727_35	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0085727_35	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0085727_36	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0085727_36	UniRef90	UniRef90_UPI001D0DD6FE	ERF family protein	NA
UHGV-0085727_36	eggNOG-mapper	411460.RUMTOR_02066	ERF superfamily	NA
UHGV-0085727_36	Pfam	PF04404	ERF superfamily	ERF
UHGV-0085727_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0085727_36	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0085727_37	UniRef90	UniRef90_R6RDX0	Arginyl-tRNA synthetase	NA
UHGV-0085727_38	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0085727_38	UniRef90	UniRef90_UPI001C8D41EE	siphovirus Gp157 family protein	NA
UHGV-0085727_38	eggNOG-mapper	1256908.HMPREF0373_00657	Siphovirus Gp157	NA
UHGV-0085727_38	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0085727_38	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0085727_43	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0085727_44	Structural annotation	NF037954	NA	NA
UHGV-0085727_47	UniRef90	UniRef90_R6H197	HTH cro/C1-type domain-containing protein	NA
UHGV-0085727_47	eggNOG-mapper	411461.DORFOR_00030	Helix-turn-helix XRE-family like proteins	NA
UHGV-0085727_47	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0085727_47	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0085727_48	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0085727_48	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0085727_48	UniRef90	UniRef90_U2PNM0	DNA-binding helix-turn-helix protein	NA
UHGV-0085727_48	eggNOG-mapper	1256908.HMPREF0373_00219	sequence-specific DNA binding	NA
UHGV-0085727_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0085727_48	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0085727_48	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0085727_49	PHROG	phrog_87	metallo-protease	other
UHGV-0085727_49	UniRef90	UniRef90_A0A416P6H2	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0085727_49	eggNOG-mapper	1347392.CCEZ01000005_gene1204	Zn peptidase	NA
UHGV-0085727_49	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0085727_49	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0085727_49	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0085727_50	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0085727_50	UniRef90	UniRef90_A0A1C6K8Q1	Abortive infection bacteriophage resistance protein	NA
UHGV-0085727_50	eggNOG-mapper	476272.RUMHYD_02820	Abi-like protein	NA
UHGV-0085727_50	PADLOC	AbiD	AbiD	Abi
UHGV-0085727_50	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0085727_50	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0085727_50	Structural annotation	PF07751, COG4823	NA	NA