UHGV-0089150

Genome information

Genome length 33,674 bps

CDS count 49

Completeness 70.95% (medium-quality)

geNomad score 0.9518

Prediction confidence Confident

Genome information
Genome ID	UHGV-0089150
vOTU ID	vOTU-015681
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_171133
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.95% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9518
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.99
Jumbo phage	No

Genome content
Genome length	33,674 bps
GC content	39.98%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	49
CDS density	94.03%
Average CDS length	650.08 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0089150_1	PHROG	phrog_10601	NA	unknown function
UHGV-0089150_1	eggNOG-mapper	864563.HMPREF9166_1263	NA	NA
UHGV-0089150_2	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0089150_2	PHROG	phrog_670	endolysin	lysis
UHGV-0089150_2	UniRef90	UniRef90_A0A352SK06	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0089150_2	eggNOG-mapper	1042156.CXIVA_01560	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0089150_2	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0089150_2	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0089150_2	Structural annotation	PF01510, PF08239, MF_04111, NF008758, COG5632	NA	NA
UHGV-0089150_4	PHROG	phrog_4105	NA	unknown function
UHGV-0089150_4	eggNOG-mapper	397288.C806_00056	NA	NA
UHGV-0089150_6	Pfam	PF03406	Phage tail fibre repeat	Phage_fiber_2
UHGV-0089150_8	eggNOG-mapper	679935.Alfi_0763	NA	NA
UHGV-0089150_9	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0089150_9	eggNOG-mapper	572544.Ilyop_1021	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0089150_9	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0089150_10	PHROG	phrog_48	tail protein	tail
UHGV-0089150_10	UniRef90	UniRef90_A0A1C5ZGF3	Bacteriophage P2-related tail formation protein	NA
UHGV-0089150_10	eggNOG-mapper	887325.HMPREF0381_0403	Phage tail protein (Tail_P2_I)	NA
UHGV-0089150_10	Pfam	PF09684	Phage tail protein (Tail_P2_I)	Tail_P2_I
UHGV-0089150_10	NCBIFam	TIGR01634.1	phage tail protein I	NA
UHGV-0089150_10	COG	COG4385	Bacteriophage P2-related tail formation protein	NA
UHGV-0089150_10	Structural annotation	PF09684, TIGR01634, COG4385	NA	NA
UHGV-0089150_11	PHROG	phrog_6	baseplate protein	tail
UHGV-0089150_11	UniRef90	UniRef90_A0A371J2V5	Baseplate J/gp47 family protein	NA
UHGV-0089150_11	eggNOG-mapper	411470.RUMGNA_00246	NA	NA
UHGV-0089150_11	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0089150_11	COG	COG3948	Phage-related baseplate assembly protein	NA
UHGV-0089150_11	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3948	NA	NA
UHGV-0089150_12	UniRef90	UniRef90_A0A329MGU2	GPW_gp25 domain-containing protein	NA
UHGV-0089150_12	eggNOG-mapper	1235835.C814_03449	GPW Gp25 family protein	NA
UHGV-0089150_12	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0089150_13	PHROG	phrog_76	tail protein	tail
UHGV-0089150_13	UniRef90	UniRef90_A0A1M7LUF6	Phage P2 GpU	NA
UHGV-0089150_13	eggNOG-mapper	657322.FPR_27050	Phage P2 GpU	NA
UHGV-0089150_13	Pfam	PF06995	Phage P2 GpU	Phage_P2_GpU
UHGV-0089150_13	COG	COG3499	NA	NA
UHGV-0089150_15	KOfam	K06905	NA	NA
UHGV-0089150_15	PHROG	phrog_52	tail protein	tail
UHGV-0089150_15	UniRef90	UniRef90_UPI001EE59FE1	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0089150_15	eggNOG-mapper	478749.BRYFOR_07549	COG3500 Phage protein D	NA
UHGV-0089150_15	COG	COG3500	NA	NA
UHGV-0089150_15	Structural annotation	PF05954, NF033848, COG3500	NA	NA
UHGV-0089150_16	PHROG	phrog_46	tail protein	tail
UHGV-0089150_16	UniRef90	UniRef90_A0A3P6KVL3	Phage tail protein gpX	NA
UHGV-0089150_16	eggNOG-mapper	411470.RUMGNA_00241	Phage Tail Protein X	NA
UHGV-0089150_16	Pfam	PF05489	Phage Tail Protein X	Phage_tail_X
UHGV-0089150_16	COG	COG5004	P2-like prophage tail protein X	NA
UHGV-0089150_16	Structural annotation	PF05489, TIGR02899, COG5004	NA	NA
UHGV-0089150_17	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0089150_17	UniRef90	UniRef90_A0A7U6KDP8	Phage tail length tape-measure protein	NA
UHGV-0089150_17	eggNOG-mapper	411461.DORFOR_01175	phage tail tape measure protein	NA
UHGV-0089150_17	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0089150_17	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0089150_17	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0089150_17	Structural annotation	PF10145, PF12026, TIGR01760, COG5280	NA	NA
UHGV-0089150_18	PHROG	phrog_3140	tail assembly chaperone	tail
UHGV-0089150_18	eggNOG-mapper	693746.OBV_22800	Phage tail assembly chaperone proteins, E, or 41 or 14	NA
UHGV-0089150_18	Structural annotation	PF10109	NA	NA
UHGV-0089150_19	KOfam	K06908	NA	NA
UHGV-0089150_19	PHROG	phrog_55	head closure	connector
UHGV-0089150_19	UniRef90	UniRef90_A0A7U6KDK0	Phage major tail tube protein	NA
UHGV-0089150_19	eggNOG-mapper	478749.BRYFOR_07545	Phage tail tube protein FII	NA
UHGV-0089150_19	Pfam	PF04985	Phage tail tube protein FII	Phage_tube
UHGV-0089150_19	COG	COG3498	Phage tail tube protein FII	NA
UHGV-0089150_19	Structural annotation	PF04985, TIGR01611, COG3498	NA	NA
UHGV-0089150_20	KOfam	K06907	NA	NA
UHGV-0089150_20	PHROG	phrog_23	tail sheath	tail
UHGV-0089150_20	UniRef90	UniRef90_A0A6L9HMS7	Phage tail sheath family protein	NA
UHGV-0089150_20	eggNOG-mapper	887325.HMPREF0381_0393	COG3497 Phage tail sheath protein FI	NA
UHGV-0089150_20	COG	COG3497	Phage tail sheath protein FI	NA
UHGV-0089150_20	Structural annotation	PF10758, TIGR03355, COG3497	NA	NA
UHGV-0089150_21	PHROG	phrog_4089	NA	unknown function
UHGV-0089150_21	eggNOG-mapper	610130.Closa_0845	NA	NA
UHGV-0089150_22	PHROG	phrog_2581	virion structural protein	head and packaging
UHGV-0089150_22	eggNOG-mapper	411470.RUMGNA_00234	NA	NA
UHGV-0089150_22	Structural annotation	PF08873	NA	NA
UHGV-0089150_23	PHROG	phrog_27	tail completion or Neck1 protein	connector
UHGV-0089150_23	Structural annotation	PF06763	NA	NA
UHGV-0089150_24	PHROG	phrog_2551	minor tail protein	tail
UHGV-0089150_24	eggNOG-mapper	1444309.JAQG01000145_gene2691	NA	NA
UHGV-0089150_24	Structural annotation	PF05354, TIGR01563, COG5614	NA	NA
UHGV-0089150_25	PHROG	phrog_29	major head protein	head and packaging
UHGV-0089150_25	UniRef90	UniRef90_UPI0019233712	major capsid protein	NA
UHGV-0089150_25	eggNOG-mapper	445972.ANACOL_03362	Phage major capsid protein E	NA
UHGV-0089150_25	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0089150_25	Structural annotation	PF03864, MF_04133, TIGR04387, COG4653	NA	NA
UHGV-0089150_26	Structural annotation	PF02924	NA	NA
UHGV-0089150_27	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0089150_27	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0089150_27	UniRef90	UniRef90_A0A3A8Z098	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0089150_27	eggNOG-mapper	1497679.EP56_02235	Serine dehydrogenase proteinase	NA
UHGV-0089150_27	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0089150_27	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0089150_27	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0089150_28	PHROG	phrog_21	portal protein	head and packaging
UHGV-0089150_28	UniRef90	UniRef90_A0A1Q6LLL7	Phage portal protein	NA
UHGV-0089150_28	eggNOG-mapper	857293.CAAU_0797	Phage portal protein, lambda family	NA
UHGV-0089150_28	Pfam	PF05136	Phage portal protein, lambda family	Phage_portal_2
UHGV-0089150_28	NCBIFam	TIGR01539.1	phage portal protein	NA
UHGV-0089150_28	COG	COG5511	Phage capsid protein	NA
UHGV-0089150_28	Structural annotation	PF05136, MF_04135, TIGR01539, COG5511	NA	NA
UHGV-0089150_29	PHROG	phrog_118	head-tail adaptor	connector
UHGV-0089150_29	UniRef90	UniRef90_UPI0019D0AF1B	NA	NA
UHGV-0089150_29	eggNOG-mapper	1235793.C809_02659	NA	NA
UHGV-0089150_29	Pfam	PF19645	NA	DUF6148
UHGV-0089150_29	Structural annotation	PF19645	NA	NA
UHGV-0089150_30	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0089150_30	PHROG	phrog_15	terminase large subunit	head and packaging
UHGV-0089150_30	UniRef90	UniRef90_A0A3A8YFM8	Phage terminase large subunit family protein	NA
UHGV-0089150_30	eggNOG-mapper	1235793.C809_02658	Phage terminase large subunit (GpA)	NA
UHGV-0089150_30	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0089150_30	Pfam	PF20454	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
UHGV-0089150_30	COG	COG5525	Phage terminase, large subunit GpA	NA
UHGV-0089150_30	HAMAP	MF_04144	Terminase, large subunit	NA
UHGV-0089150_30	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0089150_31	PHROG	phrog_57	terminase small subunit	head and packaging
UHGV-0089150_31	UniRef90	UniRef90_A0A1M7YBS6	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-0089150_31	eggNOG-mapper	1235793.C809_02657	NA	NA
UHGV-0089150_31	COG	COG4220	Phage DNA packaging protein, Nu1 subunit of terminase	NA
UHGV-0089150_31	Structural annotation	PF07471, NF040990, COG4220	NA	NA
UHGV-0089150_32	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0089150_32	PHROG	phrog_216	integrase	integration and excision
UHGV-0089150_32	UniRef90	UniRef90_A0A5S4W1B9	Site-specific integrase	NA
UHGV-0089150_32	eggNOG-mapper	596329.HMPREF0631_1365	Site-specific recombinase, phage integrase family	NA
UHGV-0089150_32	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0089150_32	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0089150_32	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-0089150_33	UniRef90	UniRef90_UPI001F1F8F5C	chemotaxis protein	NA
UHGV-0089150_33	eggNOG-mapper	1042156.CXIVA_01520	NA	NA
UHGV-0089150_33	Structural annotation	NF008671, COG4710	NA	NA
UHGV-0089150_38	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0089150_38	UniRef90	UniRef90_UPI001C01CFF8	SANT/Myb domain-containing protein	NA
UHGV-0089150_38	eggNOG-mapper	756499.Desde_1065	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	NA
UHGV-0089150_38	Pfam	PF13921	Myb-like DNA-binding domain	Myb_DNA-bind_6
UHGV-0089150_38	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-0089150_38	Structural annotation	PF02796, NF040595	NA	NA
UHGV-0089150_42	PHROG	phrog_391	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0089150_42	UniRef90	UniRef90_UPI001AA16547	NA	NA
UHGV-0089150_42	eggNOG-mapper	411490.ANACAC_02410	DnaD domain protein	NA
UHGV-0089150_42	Pfam	PF19481	NA	DUF6017
UHGV-0089150_42	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0089150_43	PHROG	phrog_1029	NA	unknown function
UHGV-0089150_43	UniRef90	UniRef90_A0A3D5WKT6	Peptidase S59 domain-containing protein	NA
UHGV-0089150_43	eggNOG-mapper	1232453.BAIF02000057_gene1140	NA	NA
UHGV-0089150_43	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0089150_44	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0089150_44	UniRef90	UniRef90_A0A336QR08	Replication terminator protein, phage associated	NA
UHGV-0089150_44	eggNOG-mapper	1298920.KI911353_gene2719	NA	NA
UHGV-0089150_45	PHROG	phrog_30343	NA	unknown function
UHGV-0089150_45	UniRef90	UniRef90_A0A417A5J9	N-acetyltransferase	NA
UHGV-0089150_45	eggNOG-mapper	397291.C804_00939	NA	NA
UHGV-0089150_45	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-0089150_46	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0089150_46	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-0089150_46	UniRef90	UniRef90_A0A2V2D6Q6	N6_Mtase domain-containing protein	NA
UHGV-0089150_46	eggNOG-mapper	1444306.JFZC01000034_gene2643	type I restriction-modification system	NA
UHGV-0089150_46	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-0089150_46	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0089150_46	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0089150_46	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-0089150_47	PHROG	phrog_874	NA	unknown function
UHGV-0089150_47	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0089150_47	Pfam	PF04266	ASCH domain	ASCH
UHGV-0089150_47	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0089150_49	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0089150_49	PHROG	phrog_15982	NA	unknown function
UHGV-0089150_49	UniRef90	UniRef90_UPI001439CF4B	NA	NA
UHGV-0089150_49	eggNOG-mapper	641107.CDLVIII_1319	ParB-like nuclease domain	NA
UHGV-0089150_49	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0089150_49	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA