UHGV-0090455

Genome information

Genome length 27,507 bps

CDS count 45

Completeness 72.39% (medium-quality)

geNomad score 0.9765

Prediction confidence Confident

Genome information
Genome ID	UHGV-0090455
vOTU ID	vOTU-027190
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_171646
BioSample	NA
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	72.39% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9765
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.66
Jumbo phage	No

Genome content
Genome length	27,507 bps
GC content	46.41%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	45
CDS density	92.96%
Average CDS length	572.73 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0090455_1	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0090455_1	eggNOG-mapper	693746.OBV_25080	Phage-related minor tail protein	NA
UHGV-0090455_1	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0090455_1	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0090455_1	COG	COG5283	Phage-related tail protein	NA
UHGV-0090455_2	PHROG	phrog_706	NA	unknown function
UHGV-0090455_2	UniRef90	UniRef90_A0A1C5QVP1	Bacteriophage Gp15 protein	NA
UHGV-0090455_2	eggNOG-mapper	1235792.C808_05375	COG NOG24969 non supervised orthologous group	NA
UHGV-0090455_2	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0090455_2	Structural annotation	PF06854	NA	NA
UHGV-0090455_3	PHROG	phrog_3099	NA	unknown function
UHGV-0090455_3	eggNOG-mapper	1235792.C808_05373	NA	NA
UHGV-0090455_3	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0090455_4	PHROG	phrog_3266	tail completion	connector
UHGV-0090455_4	eggNOG-mapper	411470.RUMGNA_02223	NA	NA
UHGV-0090455_4	Structural annotation	PF12691	NA	NA
UHGV-0090455_5	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0090455_5	UniRef90	UniRef90_UPI001C8E2A32	minor capsid protein	NA
UHGV-0090455_5	eggNOG-mapper	411470.RUMGNA_02222	NA	NA
UHGV-0090455_5	Structural annotation	PF11114	NA	NA
UHGV-0090455_6	PHROG	phrog_3366	NA	unknown function
UHGV-0090455_6	eggNOG-mapper	411470.RUMGNA_02221	NA	NA
UHGV-0090455_6	Pfam	PF20536	NA	DUF6751
UHGV-0090455_6	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0090455_7	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0090455_7	eggNOG-mapper	411461.DORFOR_00743	NA	NA
UHGV-0090455_8	PHROG	phrog_10	major head protein	head and packaging
UHGV-0090455_8	UniRef90	UniRef90_A0A1C5QUP5	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0090455_8	eggNOG-mapper	411461.DORFOR_00744	COG NOG20168 non supervised orthologous group	NA
UHGV-0090455_8	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0090455_8	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0090455_8	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0090455_8	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0090455_9	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0090455_9	eggNOG-mapper	1235792.C808_05367	NA	NA
UHGV-0090455_9	Structural annotation	PF10788, MF_02110	NA	NA
UHGV-0090455_10	KOfam	K07584	NA	NA
UHGV-0090455_10	PHROG	phrog_4478	peptidase	other
UHGV-0090455_10	UniRef90	UniRef90_A0A1C5QUN2	Predicted ribosomal protein	NA
UHGV-0090455_10	eggNOG-mapper	411462.DORLON_00788	Pfam:Peptidase_C108	NA
UHGV-0090455_10	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-0090455_10	COG	COG2868	NA	NA
UHGV-0090455_10	Structural annotation	PF04327, NF011124, COG2868	NA	NA
UHGV-0090455_11	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0090455_11	UniRef90	UniRef90_UPI000E473058	NA	NA
UHGV-0090455_11	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-0090455_11	Structural annotation	PF14359	NA	NA
UHGV-0090455_12	PHROG	phrog_918	NA	unknown function
UHGV-0090455_12	UniRef90	UniRef90_UPI00156D5D02	NA	NA
UHGV-0090455_12	eggNOG-mapper	537007.BLAHAN_05515	NA	NA
UHGV-0090455_12	Pfam	PF19791	NA	DUF6275
UHGV-0090455_12	Structural annotation	PF19791	NA	NA
UHGV-0090455_13	PHROG	phrog_34731	NA	unknown function
UHGV-0090455_13	eggNOG-mapper	1400520.LFAB_08810	NA	NA
UHGV-0090455_13	Structural annotation	PF02699, MF_00369, TIGR00739, COG5475	NA	NA
UHGV-0090455_14	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0090455_14	UniRef90	UniRef90_UPI001917634A	minor capsid protein	NA
UHGV-0090455_14	eggNOG-mapper	1235799.C818_04219	Phage minor capsid protein 2	NA
UHGV-0090455_14	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0090455_14	Pfam	PF21814	NA	DUF6883
UHGV-0090455_14	COG	COG2369	NA	NA
UHGV-0090455_15	PHROG	phrog_533	portal protein	head and packaging
UHGV-0090455_15	UniRef90	UniRef90_A0A1C5QU10	Phage portal protein, putative, A118 family	NA
UHGV-0090455_15	eggNOG-mapper	411462.DORLON_00795	COG NOG25118 non supervised orthologous group	NA
UHGV-0090455_15	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0090455_15	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0090455_16	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0090455_16	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0090455_16	UniRef90	UniRef90_A0A1C5QTK5	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	NA
UHGV-0090455_16	eggNOG-mapper	411461.DORFOR_00750	COG COG1783 Phage terminase large subunit	NA
UHGV-0090455_16	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0090455_16	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0090455_16	COG	COG1783	Phage terminase large subunit	NA
UHGV-0090455_16	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0090455_17	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-0090455_17	UniRef90	UniRef90_UPI00189AF2D9	phage terminase small subunit	NA
UHGV-0090455_17	eggNOG-mapper	552396.HMPREF0863_04210	DNA packaging	NA
UHGV-0090455_17	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0090455_17	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0090455_17	COG	COG5484	NA	NA
UHGV-0090455_17	Structural annotation	NF040601, COG5484	NA	NA
UHGV-0090455_18	PHROG	phrog_11237	NA	unknown function
UHGV-0090455_18	eggNOG-mapper	610130.Closa_0738	NA	NA
UHGV-0090455_20	PHROG	phrog_9958	NA	unknown function
UHGV-0090455_20	UniRef90	UniRef90_A0A412ELZ1	NA	NA
UHGV-0090455_20	Pfam	PF19789	NA	DUF6273
UHGV-0090455_20	Structural annotation	PF19789	NA	NA
UHGV-0090455_23	UniRef90	UniRef90_R7NA70	Putative long-chain-fatty-acid-CoA ligase	NA
UHGV-0090455_23	eggNOG-mapper	411470.RUMGNA_02041	NA	NA
UHGV-0090455_24	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0090455_24	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0090455_24	UniRef90	UniRef90_UPI001C01D594	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0090455_24	eggNOG-mapper	742765.HMPREF9457_03403	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0090455_24	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0090455_24	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0090455_24	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-0090455_25	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0090455_25	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0090455_25	UniRef90	UniRef90_UPI001C026824	single-stranded DNA-binding protein	NA
UHGV-0090455_25	eggNOG-mapper	658088.HMPREF0987_02000	Single-strand binding protein family	NA
UHGV-0090455_25	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0090455_25	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0090455_25	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0090455_25	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0090455_25	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0090455_26	PHROG	phrog_9300	NA	unknown function
UHGV-0090455_27	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0090455_27	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0090455_27	UniRef90	UniRef90_UPI001C029164	DNA cytosine methyltransferase	NA
UHGV-0090455_27	eggNOG-mapper	742741.HMPREF9475_00411	C-5 cytosine-specific DNA methylase	NA
UHGV-0090455_27	PADLOC	MTase_II_00174	Type II methyltransferase	RM
UHGV-0090455_27	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0090455_27	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0090455_27	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0090455_27	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0090455_28	PHROG	phrog_463	anti-repressor	transcription regulation
UHGV-0090455_28	UniRef90	UniRef90_UPI00156FBCEE	ORF6C domain-containing protein	NA
UHGV-0090455_28	eggNOG-mapper	411490.ANACAC_00813	BRO family, N-terminal domain	NA
UHGV-0090455_28	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0090455_28	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0090455_28	COG	COG3617	Prophage antirepressor	NA
UHGV-0090455_28	Structural annotation	PF10552, PF02498, TIGR02681, COG3617	NA	NA
UHGV-0090455_29	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0090455_29	UniRef90	UniRef90_UPI001C030B8A	NA	NA
UHGV-0090455_29	eggNOG-mapper	411461.DORFOR_00014	NA	NA
UHGV-0090455_29	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0090455_29	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0090455_29	Structural annotation	PF14297	NA	NA
UHGV-0090455_30	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0090455_30	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0090455_30	UniRef90	UniRef90_UPI001C01AEC7	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0090455_30	eggNOG-mapper	411461.DORFOR_00015	Endodeoxyribonuclease RusA	NA
UHGV-0090455_30	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0090455_30	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0090455_30	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0090455_31	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0090455_31	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0090455_31	UniRef90	UniRef90_UPI00156E3AA2	recombinase RecT	NA
UHGV-0090455_31	eggNOG-mapper	658088.HMPREF0987_00529	RecT family	NA
UHGV-0090455_31	Pfam	PF03837	RecT family	RecT
UHGV-0090455_31	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0090455_31	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0090455_31	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0090455_32	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0090455_32	UniRef90	UniRef90_UPI0015715373	YqaJ viral recombinase family protein	NA
UHGV-0090455_32	eggNOG-mapper	411902.CLOBOL_00693	YqaJ-like viral recombinase domain	NA
UHGV-0090455_32	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0090455_32	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0090455_32	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0090455_32	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0090455_34	Structural annotation	PF19128	NA	NA
UHGV-0090455_35	PHROG	phrog_3777	NA	unknown function
UHGV-0090455_35	eggNOG-mapper	411462.DORLON_00813	NA	NA
UHGV-0090455_35	Structural annotation	PF18441	NA	NA
UHGV-0090455_37	UniRef90	UniRef90_A0A2V1JQ38	Glycogen synthase	NA
UHGV-0090455_37	eggNOG-mapper	742733.HMPREF9469_05094	NA	NA
UHGV-0090455_40	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0090455_40	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0090455_40	UniRef90	UniRef90_UPI00191710C2	helix-turn-helix transcriptional regulator	NA
UHGV-0090455_40	eggNOG-mapper	887325.HMPREF0381_0352	Helix-turn-helix XRE-family like proteins	NA
UHGV-0090455_40	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0090455_40	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0090455_40	Structural annotation	PF01381, NF041951, COG2944	NA	NA
UHGV-0090455_42	UniRef90	UniRef90_A0A1C6J701	Helix-turn-helix	NA
UHGV-0090455_42	eggNOG-mapper	1280698.AUJS01000007_gene1001	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0090455_42	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0090455_42	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0090455_43	KOfam	K07448	mrr; restriction system protein	NA
UHGV-0090455_43	UniRef90	UniRef90_UPI0015700369	restriction endonuclease	NA
UHGV-0090455_43	eggNOG-mapper	411459.RUMOBE_01428	Restriction endonuclease	NA
UHGV-0090455_43	Pfam	PF04471	Restriction endonuclease	Mrr_cat
UHGV-0090455_43	COG	COG1787	Endonuclease, HJR/Mrr/RecB family	NA
UHGV-0090455_44	PHROG	phrog_5319	outer membrane protein	other
UHGV-0090455_44	UniRef90	UniRef90_UPI00156DD7EE	zinc ribbon domain-containing protein	NA
UHGV-0090455_44	eggNOG-mapper	1235802.C823_04880	NA	NA
UHGV-0090455_44	Structural annotation	PF12869, PF10571, MF_01959, TIGR03943, COG5235	NA	NA
UHGV-0090455_45	KOfam	K14059	int; integrase	NA
UHGV-0090455_45	PHROG	phrog_1	integrase	integration and excision
UHGV-0090455_45	UniRef90	UniRef90_UPI00191722F2	site-specific integrase	NA
UHGV-0090455_45	eggNOG-mapper	1235799.C818_03513	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0090455_45	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0090455_45	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0090455_45	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0090455_45	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA