UHGV-0091179

Genome information

Genome length 34,005 bps

CDS count 52

Completeness 95.85% (high-quality)

geNomad score 0.9783

Prediction confidence Confident

Genome information
Genome ID	UHGV-0091179
vOTU ID	vOTU-064392
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_185782
BioSample	NA
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.85% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9783
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.82
Jumbo phage	No

Genome content
Genome length	34,005 bps
GC content	40.30%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	52
CDS density	90.81%
Average CDS length	597.75 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0091179_1	KOfam	K06882	NA	NA
UHGV-0091179_1	UniRef90	UniRef90_A0A2N0UKC3	Exoglucanase B	NA
UHGV-0091179_1	eggNOG-mapper	877414.ATWA01000007_gene202	Fibronectin type 3 domain	NA
UHGV-0091179_1	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0091179_2	KOfam	K14059	int; integrase	NA
UHGV-0091179_2	PHROG	phrog_1	integrase	integration and excision
UHGV-0091179_2	UniRef90	UniRef90_A0A412L7T7	Site-specific integrase	NA
UHGV-0091179_2	eggNOG-mapper	1540257.JQMW01000011_gene2033	Phage integrase family	NA
UHGV-0091179_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0091179_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0091179_2	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0091179_3	UniRef90	UniRef90_UPI001D095173	protein-export chaperone SecB	NA
UHGV-0091179_3	eggNOG-mapper	1031288.AXAA01000014_gene407	Preprotein translocase subunit SecB	NA
UHGV-0091179_3	Structural annotation	PF02556, MF_00821, NF004392, COG1952	NA	NA
UHGV-0091179_4	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0091179_4	UniRef90	UniRef90_A0A412UNZ9	XRE family transcriptional regulator	NA
UHGV-0091179_4	eggNOG-mapper	1280688.AUJB01000009_gene1936	Helix-turn-helix XRE-family like proteins	NA
UHGV-0091179_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0091179_4	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0091179_5	UniRef90	UniRef90_UPI001C00B95B	type II toxin-antitoxin system RelE/ParE family toxin	NA
UHGV-0091179_5	eggNOG-mapper	293826.Amet_3134	NA	NA
UHGV-0091179_5	Structural annotation	PF05973, TIGR02683, COG4683	NA	NA
UHGV-0091179_6	UniRef90	UniRef90_UPI0007E1B082	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0091179_6	eggNOG-mapper	1232443.BAIA02000106_gene3117	NA	NA
UHGV-0091179_6	Structural annotation	PF06114	NA	NA
UHGV-0091179_7	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0091179_7	UniRef90	UniRef90_A0A412UNH6	XRE family transcriptional regulator	NA
UHGV-0091179_7	eggNOG-mapper	861450.HMPREF0080_02022	Helix-turn-helix XRE-family like proteins	NA
UHGV-0091179_7	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0091179_7	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0091179_8	PHROG	phrog_2439	transcriptional regulator	transcription regulation
UHGV-0091179_8	UniRef90	UniRef90_A0A412UNI5	XRE family transcriptional regulator	NA
UHGV-0091179_8	eggNOG-mapper	1274524.BSONL12_05988	Helix-turn-helix XRE-family like proteins	NA
UHGV-0091179_8	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0091179_8	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0091179_9	PHROG	phrog_3882	NA	unknown function
UHGV-0091179_12	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0091179_15	Structural annotation	PF04570, COG2075	NA	NA
UHGV-0091179_16	PHROG	phrog_674	NA	unknown function
UHGV-0091179_16	UniRef90	UniRef90_A0A374N9T8	NA	NA
UHGV-0091179_16	eggNOG-mapper	1408437.JNJN01000039_gene373	NA	NA
UHGV-0091179_16	Pfam	PF07083	NA	DUF1351
UHGV-0091179_16	Structural annotation	PF07083	NA	NA
UHGV-0091179_17	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0091179_17	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0091179_17	UniRef90	UniRef90_A0A374N9W0	Recombinase	NA
UHGV-0091179_17	eggNOG-mapper	428127.EUBDOL_01509	RecT family	NA
UHGV-0091179_17	Pfam	PF03837	RecT family	RecT
UHGV-0091179_17	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0091179_17	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0091179_17	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0091179_18	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0091179_18	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0091179_18	UniRef90	UniRef90_A0A373XYI8	MBL fold metallo-hydrolase	NA
UHGV-0091179_18	eggNOG-mapper	665956.HMPREF1032_03101	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-0091179_18	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0091179_18	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0091179_18	Structural annotation	PF12706, MF_01818, TIGR03307, COG1234	NA	NA
UHGV-0091179_19	PHROG	phrog_398	NA	unknown function
UHGV-0091179_19	UniRef90	UniRef90_UPI000C7B20DA	putative HNHc nuclease	NA
UHGV-0091179_19	eggNOG-mapper	293826.Amet_2584	Putative HNHc nuclease	NA
UHGV-0091179_19	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0091179_19	Structural annotation	PF16784	NA	NA
UHGV-0091179_20	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0091179_20	UniRef90	UniRef90_A0A374NA85	NA	NA
UHGV-0091179_20	eggNOG-mapper	1235790.C805_00030	NA	NA
UHGV-0091179_20	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0091179_20	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0091179_20	Structural annotation	PF14297	NA	NA
UHGV-0091179_21	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0091179_21	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0091179_21	UniRef90	UniRef90_A0A374MYR7	IstB_IS21 domain-containing protein	NA
UHGV-0091179_21	eggNOG-mapper	1507.HMPREF0262_00302	Bacterial dnaA protein	NA
UHGV-0091179_21	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0091179_21	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0091179_21	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-0091179_22	PHROG	phrog_824	NA	unknown function
UHGV-0091179_22	UniRef90	UniRef90_A0A374MXE9	VRR-NUC domain-containing protein	NA
UHGV-0091179_22	eggNOG-mapper	641107.CDLVIII_1315	VRR-NUC domain	NA
UHGV-0091179_22	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0091179_22	Structural annotation	PF08774	NA	NA
UHGV-0091179_25	UniRef90	UniRef90_UPI000E4DC4DA	helix-turn-helix domain-containing protein	NA
UHGV-0091179_25	Structural annotation	PF15597	NA	NA
UHGV-0091179_26	Structural annotation	PF13211	NA	NA
UHGV-0091179_28	eggNOG-mapper	1235802.C823_04693	NA	NA
UHGV-0091179_29	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0091179_29	UniRef90	UniRef90_A0A2N0UXQ6	NA	NA
UHGV-0091179_29	eggNOG-mapper	1211035.CD30_08135	NA	NA
UHGV-0091179_29	Pfam	PF07374	NA	DUF1492
UHGV-0091179_29	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0091179_29	Structural annotation	PF07374, MF_00674, TIGR01636, COG2739	NA	NA
UHGV-0091179_30	PHROG	phrog_8680	NA	unknown function
UHGV-0091179_30	UniRef90	UniRef90_A0A373KTP5	NA	NA
UHGV-0091179_30	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0091179_30	Pfam	PF14386	NA	DUF4417
UHGV-0091179_30	Structural annotation	PF14386	NA	NA
UHGV-0091179_31	eggNOG-mapper	557436.Lreu_0830	NA	NA
UHGV-0091179_32	PHROG	phrog_9479	NA	unknown function
UHGV-0091179_32	UniRef90	UniRef90_A0A2N0UXN8	Ntox24 domain-containing protein	NA
UHGV-0091179_32	Pfam	PF15529	Bacterial toxin 24	Ntox24
UHGV-0091179_32	Structural annotation	PF15529	NA	NA
UHGV-0091179_33	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0091179_33	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0091179_33	UniRef90	UniRef90_A0A2N0UXP4	Terminase small subunit	NA
UHGV-0091179_33	eggNOG-mapper	1160721.RBI_II00483	DNA packaging	NA
UHGV-0091179_33	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0091179_33	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0091179_33	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0091179_34	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0091179_34	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0091179_34	UniRef90	UniRef90_A0A374N1S8	Terminase	NA
UHGV-0091179_34	eggNOG-mapper	1282664.H354_06621	Phage terminase, large subunit, PBSX family	NA
UHGV-0091179_34	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0091179_34	COG	COG1783	Phage terminase large subunit	NA
UHGV-0091179_34	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0091179_35	PHROG	phrog_533	portal protein	head and packaging
UHGV-0091179_35	UniRef90	UniRef90_A0A3D0XB31	Capsid protein	NA
UHGV-0091179_35	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0091179_35	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0091179_36	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0091179_36	UniRef90	UniRef90_A0A2N0UXT6	Phage minor capsid protein 2	NA
UHGV-0091179_36	eggNOG-mapper	742740.HMPREF9474_03503	Phage minor capsid protein 2	NA
UHGV-0091179_36	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0091179_36	COG	COG2369	NA	NA
UHGV-0091179_36	Structural annotation	PF06152	NA	NA
UHGV-0091179_38	PHROG	phrog_2616	NA	unknown function
UHGV-0091179_38	Structural annotation	PF01281	NA	NA
UHGV-0091179_39	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0091179_39	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-0091179_40	PHROG	phrog_422	major head protein	head and packaging
UHGV-0091179_40	UniRef90	UniRef90_UPI001C03381A	phage capsid protein	NA
UHGV-0091179_40	eggNOG-mapper	445972.ANACOL_01845	NA	NA
UHGV-0091179_40	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0091179_41	eggNOG-mapper	483218.BACPEC_01153	NA	NA
UHGV-0091179_42	PHROG	phrog_8710	NA	unknown function
UHGV-0091179_42	eggNOG-mapper	33035.JPJF01000093_gene2249	NA	NA
UHGV-0091179_42	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0091179_43	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0091179_43	eggNOG-mapper	483218.BACPEC_01151	NA	NA
UHGV-0091179_44	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0091179_44	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-0091179_44	eggNOG-mapper	1123263.AUKY01000051_gene1075	NA	NA
UHGV-0091179_44	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0091179_44	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0091179_45	PHROG	phrog_820	major tail protein	tail
UHGV-0091179_45	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-0091179_45	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0091179_46	PHROG	phrog_8300	NA	unknown function
UHGV-0091179_46	eggNOG-mapper	483218.BACPEC_01148	NA	NA
UHGV-0091179_46	Structural annotation	PF06854	NA	NA
UHGV-0091179_47	PHROG	phrog_8355	NA	unknown function
UHGV-0091179_47	UniRef90	UniRef90_UPI001C0B4BD8	Gp15 family bacteriophage protein	NA
UHGV-0091179_47	eggNOG-mapper	1262449.CP6013_3207	NA	NA
UHGV-0091179_48	PHROG	phrog_5319	outer membrane protein	other
UHGV-0091179_48	UniRef90	UniRef90_A0A1Q6JN93	zinc_ribbon_2 domain-containing protein	NA
UHGV-0091179_48	eggNOG-mapper	1042156.CXIVA_15870	sh3 domain protein	NA
UHGV-0091179_48	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0091179_48	COG	COG3103	NA	NA
UHGV-0091179_48	Structural annotation	PF03843, PF12773, MF_00984, TIGR00752, COG3065	NA	NA
UHGV-0091179_49	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-0091179_49	UniRef90	UniRef90_A0A2N0UYY1	Phage-related protein	NA
UHGV-0091179_49	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-0091179_49	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-0091179_49	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0091179_50	PHROG	phrog_1194	NA	unknown function
UHGV-0091179_50	UniRef90	UniRef90_A0A8D9PDT1	YolD-like protein	NA
UHGV-0091179_50	eggNOG-mapper	1304866.K413DRAFT_3047	NA	NA
UHGV-0091179_50	Pfam	PF20458	NA	DUF6711
UHGV-0091179_50	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0091179_51	Structural annotation	PF14594, NF033848, COG3500	NA	NA