UHGV-0091480

Genome information

Genome length 35,623 bps

CDS count 59

Completeness 100.00% (complete)

geNomad score 0.9803

Prediction confidence Confident

Genome information
Genome ID	UHGV-0091480
vOTU ID	vOTU-051499
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_172256
BioSample	SAMEA3136642
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9803
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.15
Jumbo phage	No

Genome content
Genome length	35,623 bps
GC content	59.33%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	59
CDS density	91.15%
Average CDS length	552.41 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0091480_1	KOfam	K14059	int; integrase	NA
UHGV-0091480_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0091480_1	UniRef90	UniRef90_A0A1M5ZI50	Site-specific recombinase XerD	NA
UHGV-0091480_1	eggNOG-mapper	1507.HMPREF0262_00307	Phage integrase family	NA
UHGV-0091480_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0091480_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0091480_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0091480_3	UniRef90	UniRef90_A0A845RB47	XRE family transcriptional regulator	NA
UHGV-0091480_3	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0091480_4	Structural annotation	PF09628	NA	NA
UHGV-0091480_6	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0091480_6	UniRef90	UniRef90_A0A2K9P4T7	Helix-turn-helix domain protein	NA
UHGV-0091480_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0091480_6	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0091480_8	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0091480_8	UniRef90	UniRef90_U2QJH6	DNA-binding helix-turn-helix protein	NA
UHGV-0091480_8	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-0091480_8	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0091480_8	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0091480_8	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-0091480_9	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0091480_9	UniRef90	UniRef90_UPI0002DD08A7	helix-turn-helix domain-containing protein	NA
UHGV-0091480_9	eggNOG-mapper	693746.OBV_19830	DnaD domain protein	NA
UHGV-0091480_9	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0091480_9	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0091480_9	Structural annotation	PF20714, MF_01177, NF040582, COG3355	NA	NA
UHGV-0091480_10	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0091480_10	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0091480_10	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-0091480_10	eggNOG-mapper	1226322.HMPREF1545_00095	DnaB-like helicase N terminal domain	NA
UHGV-0091480_10	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0091480_10	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0091480_10	COG	COG0305	Replicative DNA helicase	NA
UHGV-0091480_10	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0091480_13	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0091480_13	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0091480_13	UniRef90	UniRef90_UPI001BB48231	ParA family protein	NA
UHGV-0091480_13	eggNOG-mapper	1007096.BAGW01000011_gene2363	Anion-transporting ATPase	NA
UHGV-0091480_13	Pfam	PF13614	AAA domain	AAA_31
UHGV-0091480_13	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0091480_13	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0091480_14	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0091480_14	PHROG	phrog_27290	NA	unknown function
UHGV-0091480_14	UniRef90	UniRef90_A0A3D4EJM0	Chromosome partitioning protein ParB	NA
UHGV-0091480_14	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-0091480_14	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0091480_14	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0091480_14	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0091480_16	UniRef90	UniRef90_A0A2V2EEG3	NA	NA
UHGV-0091480_16	Pfam	PF04448	NA	DUF551
UHGV-0091480_16	Structural annotation	PF04448	NA	NA
UHGV-0091480_17	PHROG	phrog_38832	NA	unknown function
UHGV-0091480_18	PHROG	phrog_3136	NA	unknown function
UHGV-0091480_18	UniRef90	UniRef90_UPI001C00EDA4	ASCH domain-containing protein	NA
UHGV-0091480_18	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0091480_18	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0091480_18	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0091480_22	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0091480_22	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-0091480_22	Structural annotation	PF21578	NA	NA
UHGV-0091480_24	PHROG	phrog_21498	NA	unknown function
UHGV-0091480_24	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-0091480_24	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0091480_24	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0091480_24	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0091480_24	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0091480_24	Structural annotation	PF02195, PF05869, MF_02015, TIGR04285, TIGR01712, COG1475	NA	NA
UHGV-0091480_25	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0091480_25	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-0091480_25	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-0091480_25	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0091480_25	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0091480_25	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0091480_25	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0091480_26	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0091480_26	UniRef90	UniRef90_UPI0019583763	terminase large subunit	NA
UHGV-0091480_26	eggNOG-mapper	1007096.BAGW01000012_gene2374	Phage Terminase	NA
UHGV-0091480_26	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0091480_26	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0091480_26	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0091480_26	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0091480_27	PHROG	phrog_502	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-0091480_28	PHROG	phrog_12	portal protein	head and packaging
UHGV-0091480_28	UniRef90	UniRef90_UPI0013EF1526	phage portal protein	NA
UHGV-0091480_28	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-0091480_28	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0091480_28	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0091480_28	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0091480_28	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0091480_29	PHROG	phrog_16951	NA	unknown function
UHGV-0091480_29	eggNOG-mapper	742738.HMPREF9460_04070	NA	NA
UHGV-0091480_29	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0091480_30	PHROG	phrog_10	major head protein	head and packaging
UHGV-0091480_30	UniRef90	UniRef90_UPI001BB4749F	phage major capsid protein	NA
UHGV-0091480_30	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-0091480_30	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0091480_30	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0091480_30	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0091480_31	UniRef90	UniRef90_UPI0002DDE99A	head-tail connector protein	NA
UHGV-0091480_31	eggNOG-mapper	1007096.BAGW01000033_gene1600	NA	NA
UHGV-0091480_31	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0091480_31	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0091480_32	PHROG	phrog_25	head closure Hc1	connector
UHGV-0091480_32	UniRef90	UniRef90_A0A845R2W2	Head-tail adaptor protein	NA
UHGV-0091480_32	eggNOG-mapper	1399942.U3PFW6_9CAUD	Phage head-tail joining protein	NA
UHGV-0091480_32	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0091480_32	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0091480_32	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0091480_33	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-0091480_33	Structural annotation	PF05657	NA	NA
UHGV-0091480_34	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0091480_34	UniRef90	UniRef90_R5IIS5	HK97 gp10 family phage protein	NA
UHGV-0091480_34	eggNOG-mapper	397290.C810_00425	NA	NA
UHGV-0091480_34	Structural annotation	TIGR01725	NA	NA
UHGV-0091480_35	PHROG	phrog_88	major tail protein	tail
UHGV-0091480_35	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0091480_36	Structural annotation	PF11836, TIGR01674	NA	NA
UHGV-0091480_37	PHROG	phrog_23464	NA	unknown function
UHGV-0091480_37	UniRef90	UniRef90_UPI001E38621F	tape measure protein	NA
UHGV-0091480_37	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-0091480_37	COG	COG5412	Phage-related protein	NA
UHGV-0091480_37	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0091480_38	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0091480_39	PHROG	phrog_6616	tail protein	tail
UHGV-0091480_39	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-0091480_39	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-0091480_39	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-0091480_40	UniRef90	UniRef90_A0A810QCC8	Peptidase S74 domain-containing protein	NA
UHGV-0091480_40	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-0091480_40	Structural annotation	TIGR01643	NA	NA
UHGV-0091480_42	Pfam	PF18902	NA	DUF5658
UHGV-0091480_42	Structural annotation	PF18902	NA	NA
UHGV-0091480_47	PHROG	phrog_4105	NA	unknown function
UHGV-0091480_49	PHROG	phrog_13256	NA	unknown function
UHGV-0091480_49	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-0091480_50	PHROG	phrog_21357	endolysin	lysis
UHGV-0091480_50	UniRef90	UniRef90_R5SN87	Peptidase C51 domain-containing protein	NA
UHGV-0091480_50	eggNOG-mapper	1007096.BAGW01000017_gene816	CHAP domain	NA
UHGV-0091480_50	Pfam	PF05257	CHAP domain	CHAP
UHGV-0091480_50	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0091480_50	Structural annotation	TIGR02594	NA	NA
UHGV-0091480_51	UniRef90	UniRef90_A0A8D9PDQ3	ECF sigma factor	NA
UHGV-0091480_51	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-0091480_52	eggNOG-mapper	742740.HMPREF9474_00056	NA	NA
UHGV-0091480_52	Structural annotation	TIGR03826	NA	NA
UHGV-0091480_53	UniRef90	UniRef90_A0A6N3FXW7	Helix-turn-helix	NA
UHGV-0091480_53	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-0091480_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0091480_53	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0091480_53	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0091480_54	AcrCatalog	cluster_39973	NA	NA
UHGV-0091480_57	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0091480_59	UniRef90	UniRef90_A0A8F0WD75	RNA polymerase sigma factor/Ubiquitin-like protein	NA
UHGV-0091480_59	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA