UHGV-0091607

Genome information

vOTU vOTU-041960

Genome length 24,787 bps

CDS count 32

Completeness 51.17% (medium-quality)

geNomad score 0.9799

Prediction confidence Confident

Genome information
Genome ID	UHGV-0091607
vOTU ID	vOTU-041960
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_178761
BioSample	SAMEA3449174
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.17% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9799
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.02
Jumbo phage	No

Genome content
Genome length	24,787 bps
GC content	39.75%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	32
CDS density	90.41%
Average CDS length	702.47 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0091607_1	eggNOG-mapper	97139.C824_01317	NA	NA
UHGV-0091607_2	PHROG	phrog_16164	NA	unknown function
UHGV-0091607_2	UniRef90	UniRef90_UPI001D0681FE	GDSL-type esterase/lipase family protein	NA
UHGV-0091607_2	eggNOG-mapper	742733.HMPREF9469_01804	NA	NA
UHGV-0091607_3	PHROG	phrog_18444	NA	unknown function
UHGV-0091607_4	PHROG	phrog_6616	tail protein	tail
UHGV-0091607_4	UniRef90	UniRef90_A0A173R8I5	Peptidase S74 domain-containing protein	NA
UHGV-0091607_4	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-0091607_5	PHROG	phrog_1194	NA	unknown function
UHGV-0091607_5	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0091607_6	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0091607_6	UniRef90	UniRef90_UPI0003F4F1A1	membrane protein	NA
UHGV-0091607_6	eggNOG-mapper	1391647.AVSV01000003_gene1817	phage tail tape measure protein	NA
UHGV-0091607_6	COG	COG1511	NA	NA
UHGV-0091607_7	PHROG	phrog_706	NA	unknown function
UHGV-0091607_7	UniRef90	UniRef90_UPI00156F9D1C	Gp15 family bacteriophage protein	NA
UHGV-0091607_7	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-0091607_7	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0091607_7	Structural annotation	PF06854	NA	NA
UHGV-0091607_8	PHROG	phrog_11299	NA	unknown function
UHGV-0091607_8	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-0091607_8	Structural annotation	PF10666	NA	NA
UHGV-0091607_9	PHROG	phrog_3099	NA	unknown function
UHGV-0091607_9	eggNOG-mapper	476272.RUMHYD_01782	NA	NA
UHGV-0091607_9	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0091607_10	PHROG	phrog_3266	tail completion	connector
UHGV-0091607_10	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0091607_10	Structural annotation	PF12691	NA	NA
UHGV-0091607_11	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0091607_11	UniRef90	UniRef90_UPI0008B4CFF0	minor capsid protein	NA
UHGV-0091607_11	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0091607_11	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0091607_11	Structural annotation	PF11114	NA	NA
UHGV-0091607_12	PHROG	phrog_3366	NA	unknown function
UHGV-0091607_12	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-0091607_12	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0091607_13	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0091607_13	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0091607_14	PHROG	phrog_247	major head protein	head and packaging
UHGV-0091607_14	UniRef90	UniRef90_A0A3R6GHE6	Phage coat protein	NA
UHGV-0091607_14	eggNOG-mapper	1292035.H476_1014	NA	NA
UHGV-0091607_14	COG	COG1106	ATPase/GTPase, AAA15 family	NA
UHGV-0091607_14	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0091607_15	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0091607_15	UniRef90	UniRef90_UPI001D14C9C8	phage scaffolding protein	NA
UHGV-0091607_15	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-0091607_15	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0091607_16	UniRef90	UniRef90_A0A416S3A4	CTP synthase	NA
UHGV-0091607_16	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-0091607_17	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0091607_17	UniRef90	UniRef90_A0A373MXM0	Phage capsid protein	NA
UHGV-0091607_17	eggNOG-mapper	476272.RUMHYD_01761	Phage minor capsid protein 2	NA
UHGV-0091607_17	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0091607_17	COG	COG2369	NA	NA
UHGV-0091607_17	Structural annotation	PF06152	NA	NA
UHGV-0091607_18	PHROG	phrog_443	holin	lysis
UHGV-0091607_18	UniRef90	UniRef90_UPI000E5CA950	holin	NA
UHGV-0091607_18	eggNOG-mapper	1211844.CBLM010000023_gene976	Putative lactococcus lactis phage r1t holin	NA
UHGV-0091607_18	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0091607_18	Structural annotation	PF16945	NA	NA
UHGV-0091607_19	PHROG	phrog_533	portal protein	head and packaging
UHGV-0091607_19	UniRef90	UniRef90_A0A173R9C0	Phage portal protein, putative, A118 family	NA
UHGV-0091607_19	eggNOG-mapper	476272.RUMHYD_01758	phage minor capsid protein	NA
UHGV-0091607_19	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0091607_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0091607_20	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0091607_20	UniRef90	UniRef90_A0A3R6JYR2	PBSX family phage terminase large subunit	NA
UHGV-0091607_20	eggNOG-mapper	397290.C810_05187	Phage terminase large subunit	NA
UHGV-0091607_20	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0091607_20	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0091607_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-0091607_20	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0091607_21	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0091607_21	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0091607_21	UniRef90	UniRef90_A0A414QMP8	Terminase small subunit	NA
UHGV-0091607_21	eggNOG-mapper	1545701.LACWKB10_1177	Terminase small subunit	NA
UHGV-0091607_21	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0091607_21	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0091607_21	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0091607_23	eggNOG-mapper	1235802.C823_02864	NA	NA
UHGV-0091607_24	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0091607_24	UniRef90	UniRef90_UPI00156FD4BA	helix-turn-helix domain-containing protein	NA
UHGV-0091607_24	eggNOG-mapper	877411.JMMA01000002_gene1483	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0091607_24	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0091607_24	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0091607_28	eggNOG-mapper	658659.HMPREF0983_00103	NA	NA
UHGV-0091607_28	Structural annotation	PF18847, NF002761, COG1847	NA	NA
UHGV-0091607_29	eggNOG-mapper	476272.RUMHYD_01751	NA	NA
UHGV-0091607_31	PHROG	phrog_8684	NA	unknown function
UHGV-0091607_31	UniRef90	UniRef90_A0A373MQ88	YopX domain-containing protein	NA
UHGV-0091607_31	eggNOG-mapper	742740.HMPREF9474_03496	YopX protein	NA
UHGV-0091607_31	Pfam	PF09643	YopX protein	YopX
UHGV-0091607_31	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0091607_31	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0091607_32	PHROG	phrog_22292	NA	unknown function