UHGV-0092607

Genome information

Genome length 64,134 bps

CDS count 71

Completeness 100.00% (complete)

geNomad score 0.9774

Prediction confidence Confident

Genome information
Genome ID	UHGV-0092607
vOTU ID	vOTU-051777
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_168113
BioSample	SAMEA3136689
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9774
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.44
Jumbo phage	No

Genome content
Genome length	64,134 bps
GC content	43.37%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	71
CDS density	90.56%
Average CDS length	822.30 bps
tRNA count	3
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0092607_1	PHROG	phrog_15773	NA	unknown function
UHGV-0092607_1	UniRef90	UniRef90_UPI001E50B81C	NA	NA
UHGV-0092607_4	PHROG	phrog_3878	NA	unknown function
UHGV-0092607_4	UniRef90	UniRef90_Q5LCZ1	Putative membrane protein	NA
UHGV-0092607_4	eggNOG-mapper	272559.BF9343_2239	NA	NA
UHGV-0092607_5	eggNOG-mapper	1121098.HMPREF1534_01070	NA	NA
UHGV-0092607_5	Structural annotation	NF033787	NA	NA
UHGV-0092607_7	eggNOG-mapper	411477.PARMER_02101	NA	NA
UHGV-0092607_7	Structural annotation	PF20651	NA	NA
UHGV-0092607_9	UniRef90	UniRef90_A0A1Q6FH58	HTH cro/C1-type domain-containing protein	NA
UHGV-0092607_9	eggNOG-mapper	313594.PI23P_10145	Helix-turn-helix	NA
UHGV-0092607_9	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0092607_10	PHROG	phrog_1	integrase	integration and excision
UHGV-0092607_10	UniRef90	UniRef90_A0A4S2EKI9	Transposase	NA
UHGV-0092607_10	eggNOG-mapper	679191.HMPREF9018_0670	Belongs to the 'phage' integrase family	NA
UHGV-0092607_10	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0092607_10	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0092607_10	Structural annotation	PF13102, PF17293, NF007246, COG4973	NA	NA
UHGV-0092607_11	KOfam	K14056	puuR; HTH-type transcriptional regulator, repressor for puuD	NA
UHGV-0092607_11	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0092607_11	UniRef90	UniRef90_A0A6I2NIY2	Helix-turn-helix domain-containing protein	NA
UHGV-0092607_11	eggNOG-mapper	435590.BVU_3426	Helix-turn-helix domain	NA
UHGV-0092607_11	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0092607_11	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0092607_14	eggNOG-mapper	1227276.HMPREF9148_00167	NA	NA
UHGV-0092607_16	PHROG	phrog_10089	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UHGV-0092607_16	UniRef90	UniRef90_UPI001F14BA06	SNF2-related protein	NA
UHGV-0092607_16	eggNOG-mapper	679191.HMPREF9018_0456	helicase superfamily c-terminal domain	NA
UHGV-0092607_16	Pfam	PF18823	Inorganic Pyrophosphatase	InPase
UHGV-0092607_16	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0092607_16	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-0092607_16	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0092607_17	UniRef90	UniRef90_A0A1F6RZR6	HTH HARE-type domain-containing protein	NA
UHGV-0092607_17	Structural annotation	PF11645, PF05066, MF_00048, NF040854, COG1591	NA	NA
UHGV-0092607_19	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0092607_19	UniRef90	UniRef90_UPI0013E9F59E	terminase	NA
UHGV-0092607_19	eggNOG-mapper	1347393.HG726020_gene1832	Mu-like prophage FluMu protein gp28	NA
UHGV-0092607_19	COG	COG4373	Mu-like prophage FluMu protein gp28	NA
UHGV-0092607_19	Structural annotation	PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0092607_22	PHROG	phrog_22323	NA	unknown function
UHGV-0092607_22	eggNOG-mapper	563031.HMPREF0666_01148	NA	NA
UHGV-0092607_23	PHROG	phrog_26635	NA	unknown function
UHGV-0092607_23	UniRef90	UniRef90_R7DGV7	BIG2 domain-containing protein	NA
UHGV-0092607_23	eggNOG-mapper	742817.HMPREF9449_01785	NA	NA
UHGV-0092607_23	Structural annotation	PF17236, MF_04133, TIGR01554, COG4653	NA	NA
UHGV-0092607_25	PHROG	phrog_22135	NA	unknown function
UHGV-0092607_25	Structural annotation	PF17212	NA	NA
UHGV-0092607_26	PHROG	phrog_20787	virion structural protein	head and packaging
UHGV-0092607_28	UniRef90	UniRef90_A0A385DVA9	Putative C-type lectin	NA
UHGV-0092607_28	eggNOG-mapper	1151292.QEW_0665	NA	NA
UHGV-0092607_29	PHROG	phrog_697	structural protein	head and packaging
UHGV-0092607_29	UniRef90	UniRef90_A0A173VIN9	Mtd_N domain-containing protein	NA
UHGV-0092607_29	eggNOG-mapper	679935.Alfi_2724	NA	NA
UHGV-0092607_29	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0092607_30	PHROG	phrog_19976	tail assembly protein	tail
UHGV-0092607_30	eggNOG-mapper	679935.Alfi_2724	NA	NA
UHGV-0092607_30	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0092607_30	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0092607_31	PHROG	phrog_15037	NA	unknown function
UHGV-0092607_31	UniRef90	UniRef90_UPI0015E74944	phage holin family protein	NA
UHGV-0092607_31	eggNOG-mapper	742766.HMPREF9455_03105	NA	NA
UHGV-0092607_31	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0092607_32	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0092607_32	PHROG	phrog_822	amidase	lysis
UHGV-0092607_32	UniRef90	UniRef90_A0A173VI77	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0092607_32	eggNOG-mapper	1235803.C825_00174	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0092607_32	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0092607_32	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0092607_32	Structural annotation	PF01510, MF_04111, NF008758, COG3023	NA	NA
UHGV-0092607_33	PHROG	phrog_26448	NA	unknown function
UHGV-0092607_33	eggNOG-mapper	411477.PARMER_02011	NA	NA
UHGV-0092607_33	Pfam	PF20647	NA	DUF6808
UHGV-0092607_33	Structural annotation	PF20647	NA	NA
UHGV-0092607_34	eggNOG-mapper	762968.HMPREF9441_00556	Bacterial dnaA protein helix-turn-helix	NA
UHGV-0092607_34	Structural annotation	PF08299, NF004688	NA	NA
UHGV-0092607_37	Structural annotation	PF10628	NA	NA
UHGV-0092607_39	PHROG	phrog_156	portal protein	head and packaging
UHGV-0092607_39	eggNOG-mapper	679191.HMPREF9018_0455	NA	NA
UHGV-0092607_39	Structural annotation	PF16510, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0092607_44	PHROG	phrog_32516	NA	unknown function
UHGV-0092607_44	eggNOG-mapper	1121098.HMPREF1534_01101	NA	NA
UHGV-0092607_44	Structural annotation	PF11134, COG3292	NA	NA
UHGV-0092607_47	Structural annotation	PF02257	NA	NA
UHGV-0092607_50	UniRef90	UniRef90_UPI00189B4653	NA	NA
UHGV-0092607_50	eggNOG-mapper	411901.BACCAC_01195	NA	NA
UHGV-0092607_50	Pfam	PF04448	NA	DUF551
UHGV-0092607_50	Structural annotation	PF04448	NA	NA
UHGV-0092607_51	PHROG	phrog_9236	pyrophosphatase	other
UHGV-0092607_51	eggNOG-mapper	657309.BXY_08510	NA	NA
UHGV-0092607_51	Structural annotation	PF08761, COG4508	NA	NA
UHGV-0092607_53	PHROG	phrog_8684	NA	unknown function
UHGV-0092607_53	UniRef90	UniRef90_A0A1Q6FH80	YopX domain-containing protein	NA
UHGV-0092607_53	eggNOG-mapper	435591.BDI_0866	YopX protein	NA
UHGV-0092607_53	Pfam	PF09643	YopX protein	YopX
UHGV-0092607_53	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0092607_53	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0092607_56	eggNOG-mapper	471870.BACINT_00443	NA	NA
UHGV-0092607_57	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0092607_57	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0092607_57	UniRef90	UniRef90_A6LAB6	Cytosine-specific methyltransferase	NA
UHGV-0092607_57	eggNOG-mapper	435591.BDI_0861	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0092607_57	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0092607_57	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0092607_57	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0092607_57	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0092607_57	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0092607_59	eggNOG-mapper	761193.Runsl_1221	NA	NA
UHGV-0092607_59	Structural annotation	PF04266, MF_00684, NF003443, COG2411	NA	NA
UHGV-0092607_60	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0092607_60	UniRef90	UniRef90_A0A7K0H8A4	NA	NA
UHGV-0092607_60	eggNOG-mapper	357276.EL88_03065	COG NOG19076 non supervised orthologous group	NA
UHGV-0092607_60	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0092607_60	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0092607_60	Structural annotation	PF14297, TIGR01714	NA	NA
UHGV-0092607_61	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0092607_61	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0092607_61	UniRef90	UniRef90_UPI000A10CDA8	NA	NA
UHGV-0092607_61	eggNOG-mapper	977801.F0PII1_9VIRU	NA	NA
UHGV-0092607_61	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0092607_61	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0092607_62	PHROG	phrog_5034	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0092607_62	UniRef90	UniRef90_A0A412WPV2	Recombinase	NA
UHGV-0092607_62	eggNOG-mapper	742725.HMPREF9450_02079	NA	NA
UHGV-0092607_62	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-0092607_62	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0092607_62	Structural annotation	PF05766	NA	NA
UHGV-0092607_64	PHROG	phrog_200	lipoprotein	other
UHGV-0092607_64	UniRef90	UniRef90_UPI000E5006F6	SPFH domain-containing protein	NA
UHGV-0092607_64	eggNOG-mapper	742727.HMPREF9447_04889	SPFH Band 7 PHB domain protein	NA
UHGV-0092607_64	COG	COG0330	Regulator of protease activity HflC, stomatin/prohibitin superfamily	NA
UHGV-0092607_64	Structural annotation	PF01145, MF_01562, TIGR01932, COG0330	NA	NA
UHGV-0092607_66	PHROG	phrog_19572	NA	unknown function
UHGV-0092607_66	UniRef90	UniRef90_A0A174LVG4	NA	NA
UHGV-0092607_66	eggNOG-mapper	435591.BDI_0545	Phage tail protein	NA
UHGV-0092607_66	Pfam	PF14902	NA	DUF4494
UHGV-0092607_66	Structural annotation	PF14902	NA	NA
UHGV-0092607_67	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0092607_67	eggNOG-mapper	1235788.C802_00052	NA	NA
UHGV-0092607_67	Structural annotation	NF007281	NA	NA
UHGV-0092607_68	KOfam	K12574	rnj; ribonuclease J [EC:3.1.-.-]	NA
UHGV-0092607_68	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0092607_68	UniRef90	UniRef90_A0A7K0H759	MBL fold metallo-hydrolase	NA
UHGV-0092607_68	eggNOG-mapper	457424.BFAG_02390	Metallo-beta-lactamase superfamily	NA
UHGV-0092607_68	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0092607_68	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0092607_69	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0092607_69	UniRef90	UniRef90_UPI001600306B	recombinase RecT	NA
UHGV-0092607_69	eggNOG-mapper	457424.BFAG_02389	NA	NA
UHGV-0092607_69	Pfam	PF03837	RecT family	RecT
UHGV-0092607_69	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0092607_70	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0092607_70	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0092607_70	UniRef90	UniRef90_UPI001BD963DD	AAA family ATPase	NA
UHGV-0092607_70	eggNOG-mapper	1121285.AUFK01000002_gene9	nuclear chromosome segregation	NA
UHGV-0092607_70	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0092607_70	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA