UHGV-0092641

Genome information

Genome length 40,349 bps

CDS count 60

Completeness 99.90% (high-quality)

geNomad score 0.9799

Prediction confidence Confident

Genome information
Genome ID	UHGV-0092641
vOTU ID	vOTU-008015
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_171415
BioSample	SAMEA3136688
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9799
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	53.35
Jumbo phage	No

Genome content
Genome length	40,349 bps
GC content	42.37%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	60
CDS density	92.26%
Average CDS length	624.20 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0092641_1	UniRef90	UniRef90_A0A0K9NAM5	RNA polymerase principal sigma factor, sigma 70	NA
UHGV-0092641_1	eggNOG-mapper	411462.DORLON_00093	NA	NA
UHGV-0092641_2	KOfam	K06131	clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]	NA
UHGV-0092641_2	UniRef90	UniRef90_A0A173WYL4	Predicted membrane protein	NA
UHGV-0092641_2	eggNOG-mapper	1280698.AUJS01000016_gene1773	Putative ABC-transporter type IV	NA
UHGV-0092641_2	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-0092641_2	COG	COG4905	NA	NA
UHGV-0092641_3	KOfam	K14059	int; integrase	NA
UHGV-0092641_3	PHROG	phrog_1	integrase	integration and excision
UHGV-0092641_3	UniRef90	UniRef90_A0A173RBY2	Site-specific tyrosine recombinase XerD	NA
UHGV-0092641_3	eggNOG-mapper	1280698.AUJS01000007_gene999	Phage integrase family	NA
UHGV-0092641_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0092641_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0092641_3	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0092641_5	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0092641_5	eggNOG-mapper	33035.JPJF01000109_gene437	Host cell surface-exposed lipoprotein	NA
UHGV-0092641_5	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0092641_5	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0092641_5	Structural annotation	PF02631, MF_01114, NF001062, COG2137	NA	NA
UHGV-0092641_7	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0092641_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0092641_7	UniRef90	UniRef90_A0A173RBE6	Antitoxin PezA	NA
UHGV-0092641_7	eggNOG-mapper	1280698.AUJS01000007_gene1002	Helix-turn-helix XRE-family like proteins	NA
UHGV-0092641_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0092641_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0092641_7	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0092641_11	PHROG	phrog_18631	NA	unknown function
UHGV-0092641_15	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0092641_15	eggNOG-mapper	411461.DORFOR_01138	NA	NA
UHGV-0092641_15	Structural annotation	PF01446	NA	NA
UHGV-0092641_17	KOfam	K03469	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	NA
UHGV-0092641_17	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0092641_17	UniRef90	UniRef90_A0A6N9JSQ7	RNase H type-1 domain-containing protein	NA
UHGV-0092641_17	eggNOG-mapper	1280698.AUJS01000007_gene1015	RNA-DNA hybrid ribonuclease activity	NA
UHGV-0092641_17	Pfam	PF00075	RNase H	RNase_H
UHGV-0092641_17	COG	COG0328	Ribonuclease HI	NA
UHGV-0092641_17	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0092641_18	UniRef90	UniRef90_UPI0003F6328F	Cas9 inhibitor AcrIIA9 family protein	NA
UHGV-0092641_18	eggNOG-mapper	1235793.C809_01906	NA	NA
UHGV-0092641_18	Pfam	PF14058	PcfK-like protein	PcfK
UHGV-0092641_19	PHROG	phrog_8470	NA	unknown function
UHGV-0092641_19	UniRef90	UniRef90_UPI001D0719D3	PcfJ domain-containing protein	NA
UHGV-0092641_19	eggNOG-mapper	457412.RSAG_01172	PcfJ-like protein	NA
UHGV-0092641_19	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0092641_19	Structural annotation	PF14284	NA	NA
UHGV-0092641_20	PHROG	phrog_15077	NA	unknown function
UHGV-0092641_20	UniRef90	UniRef90_A0A174WLY0	NA	NA
UHGV-0092641_20	eggNOG-mapper	1280698.AUJS01000007_gene1019	NA	NA
UHGV-0092641_20	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0092641_21	PHROG	phrog_7566	NA	unknown function
UHGV-0092641_21	eggNOG-mapper	1280698.AUJS01000007_gene1020	NA	NA
UHGV-0092641_25	UniRef90	UniRef90_A0A173RC68	YopX protein	NA
UHGV-0092641_25	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0092641_27	PHROG	phrog_3154	NA	unknown function
UHGV-0092641_27	UniRef90	UniRef90_UPI000CF8F0F1	NA	NA
UHGV-0092641_27	eggNOG-mapper	97139.C824_02654	NA	NA
UHGV-0092641_27	Pfam	PF07866	NA	DUF1653
UHGV-0092641_27	COG	COG4728	NA	NA
UHGV-0092641_27	Structural annotation	PF07866, COG4728	NA	NA
UHGV-0092641_28	Structural annotation	PF10400	NA	NA
UHGV-0092641_33	PHROG	phrog_26445	NA	unknown function
UHGV-0092641_33	UniRef90	UniRef90_UPI001EDD5E1E	Trp family transcriptional regulator	NA
UHGV-0092641_33	eggNOG-mapper	742765.HMPREF9457_02112	NA	NA
UHGV-0092641_33	Structural annotation	PF21220, COG2771	NA	NA
UHGV-0092641_34	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0092641_34	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0092641_34	UniRef90	UniRef90_UPI0015711440	type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0092641_34	eggNOG-mapper	411461.DORFOR_01157	NA	NA
UHGV-0092641_34	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0092641_34	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0092641_34	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0092641_36	PHROG	phrog_6568	NA	unknown function
UHGV-0092641_37	PHROG	phrog_11237	NA	unknown function
UHGV-0092641_37	eggNOG-mapper	411461.DORFOR_01161	NA	NA
UHGV-0092641_38	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0092641_38	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-0092641_38	UniRef90	UniRef90_B0G4H5	Phage terminase, large subunit, PBSX family	NA
UHGV-0092641_38	eggNOG-mapper	411461.DORFOR_01162	Phage terminase, large subunit, PBSX family	NA
UHGV-0092641_38	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0092641_38	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0092641_38	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0092641_38	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0092641_38	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0092641_38	COG	COG1783	Phage terminase large subunit	NA
UHGV-0092641_38	Structural annotation	PF04466, PF17288, PF06056, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0092641_39	PHROG	phrog_533	portal protein	head and packaging
UHGV-0092641_39	UniRef90	UniRef90_A0A173RC48	Phage portal protein, putative, A118 family	NA
UHGV-0092641_39	eggNOG-mapper	411461.DORFOR_01163	NA	NA
UHGV-0092641_39	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0092641_40	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0092641_40	UniRef90	UniRef90_A0A173RCB2	Phage minor capsid protein 2	NA
UHGV-0092641_40	eggNOG-mapper	411461.DORFOR_01164	NA	NA
UHGV-0092641_40	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0092641_40	COG	COG2369	NA	NA
UHGV-0092641_40	Structural annotation	PF06152	NA	NA
UHGV-0092641_42	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0092641_42	UniRef90	UniRef90_A0A415UCX1	NA	NA
UHGV-0092641_42	eggNOG-mapper	411461.DORFOR_01165	NA	NA
UHGV-0092641_42	Pfam	PF14359	NA	DUF4406
UHGV-0092641_42	Structural annotation	PF14359	NA	NA
UHGV-0092641_43	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0092641_43	UniRef90	UniRef90_A0A173RCF7	Phage minor structural protein GP20	NA
UHGV-0092641_43	eggNOG-mapper	411461.DORFOR_01166	COG NOG36366 non supervised orthologous group	NA
UHGV-0092641_43	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0092641_44	PHROG	phrog_283	major head protein	head and packaging
UHGV-0092641_44	UniRef90	UniRef90_A0A173REC9	p22 coat protein-gene protein 5	NA
UHGV-0092641_44	eggNOG-mapper	411461.DORFOR_01167	P22 coat protein - gene protein 5	NA
UHGV-0092641_44	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0092641_44	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0092641_45	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0092641_45	eggNOG-mapper	536233.CLO_0887	NA	NA
UHGV-0092641_46	PHROG	phrog_3366	NA	unknown function
UHGV-0092641_46	eggNOG-mapper	999411.HMPREF1092_03319	NA	NA
UHGV-0092641_46	Pfam	PF20536	NA	DUF6751
UHGV-0092641_46	Structural annotation	PF20536	NA	NA
UHGV-0092641_47	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0092641_47	UniRef90	UniRef90_UPI001E609FF9	minor capsid protein	NA
UHGV-0092641_47	eggNOG-mapper	411461.DORFOR_01170	Minor capsid protein	NA
UHGV-0092641_47	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0092641_47	Structural annotation	PF11114	NA	NA
UHGV-0092641_48	PHROG	phrog_3266	tail completion	connector
UHGV-0092641_48	Structural annotation	PF12691	NA	NA
UHGV-0092641_49	PHROG	phrog_820	major tail protein	tail
UHGV-0092641_49	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-0092641_49	eggNOG-mapper	411461.DORFOR_01172	NA	NA
UHGV-0092641_49	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0092641_50	PHROG	phrog_4450	NA	unknown function
UHGV-0092641_50	UniRef90	UniRef90_A0A7X3SKC0	AP endonuclease	NA
UHGV-0092641_50	eggNOG-mapper	931276.Cspa_c07520	NA	NA
UHGV-0092641_50	Pfam	PF20378	NA	DUF6673
UHGV-0092641_50	Structural annotation	PF20378	NA	NA
UHGV-0092641_51	PHROG	phrog_706	NA	unknown function
UHGV-0092641_51	UniRef90	UniRef90_A0A173RDK1	Bacteriophage Gp15 protein	NA
UHGV-0092641_51	eggNOG-mapper	411461.DORFOR_01174	Bacteriophage Gp15 protein	NA
UHGV-0092641_51	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0092641_51	Structural annotation	PF06854	NA	NA
UHGV-0092641_52	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0092641_52	PHROG	phrog_19074	NA	unknown function
UHGV-0092641_52	UniRef90	UniRef90_A0A173RDD3	Phage-related protein	NA
UHGV-0092641_52	eggNOG-mapper	411461.DORFOR_01175	phage tail tape measure protein	NA
UHGV-0092641_52	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0092641_52	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0092641_52	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0092641_52	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0092641_53	UniRef90	UniRef90_UPI0015709E93	phage tail protein	NA
UHGV-0092641_53	eggNOG-mapper	411461.DORFOR_01176	NA	NA
UHGV-0092641_53	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0092641_54	PHROG	phrog_538	minor tail protein	tail
UHGV-0092641_54	UniRef90	UniRef90_UPI001E2C8064	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0092641_54	eggNOG-mapper	411461.DORFOR_01177	NA	NA
UHGV-0092641_54	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0092641_54	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0092641_55	PHROG	phrog_13141	NA	unknown function
UHGV-0092641_55	UniRef90	UniRef90_UPI00156D68EE	H-type lectin domain-containing protein	NA
UHGV-0092641_55	eggNOG-mapper	411461.DORFOR_01178	NA	NA
UHGV-0092641_55	Pfam	PF09458	H-type lectin domain	H_lectin
UHGV-0092641_55	Structural annotation	PF20747	NA	NA
UHGV-0092641_56	PHROG	phrog_19695	NA	unknown function
UHGV-0092641_56	eggNOG-mapper	411462.DORLON_00772	NA	NA
UHGV-0092641_57	KOfam	K21478	icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]	NA
UHGV-0092641_57	UniRef90	UniRef90_A0A367G9J3	NodB homology domain-containing protein	NA
UHGV-0092641_57	eggNOG-mapper	411462.DORLON_00771	NA	NA
UHGV-0092641_57	Pfam	PF01522	Polysaccharide deacetylase	Polysacc_deac_1
UHGV-0092641_58	PHROG	phrog_1009	NA	unknown function
UHGV-0092641_58	UniRef90	UniRef90_A0A173RD60	Branched-chain amino acid ABC transporter permease	NA
UHGV-0092641_58	eggNOG-mapper	742765.HMPREF9457_03364	NA	NA
UHGV-0092641_59	PHROG	phrog_1129	holin	lysis
UHGV-0092641_59	UniRef90	UniRef90_UPI001F15FE24	phage holin family protein	NA
UHGV-0092641_59	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-0092641_59	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0092641_59	Structural annotation	PF06946	NA	NA
UHGV-0092641_60	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0092641_60	PHROG	phrog_2742	endolysin	lysis
UHGV-0092641_60	UniRef90	UniRef90_A0A845KJG7	MurNAc-LAA domain-containing protein	NA
UHGV-0092641_60	eggNOG-mapper	411462.DORLON_00764	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0092641_60	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0092641_60	Pfam	PF07538	Clostridial hydrophobic W	ChW
UHGV-0092641_60	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0092641_60	Structural annotation	PF01520, MF_00562, TIGR02883, COG5492, COG0860	NA	NA