UHGV-0092779

Genome information

Genome length 33,811 bps

CDS count 58

Completeness 87.83% (medium-quality)

geNomad score 0.9764

Prediction confidence Confident

Genome information
Genome ID	UHGV-0092779
vOTU ID	vOTU-015879
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_171977
BioSample	SAMEA3136650
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.83% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	Yes
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9764
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.38
Jumbo phage	No

Genome content
Genome length	33,811 bps
GC content	46.09%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	58
CDS density	90.95%
Average CDS length	535.14 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0092779_1	eggNOG-mapper	658086.HMPREF0994_00184	ABC transporter	NA
UHGV-0092779_1	COG	COG1136	ABC-type lipoprotein export system, ATPase component	NA
UHGV-0092779_3	eggNOG-mapper	411469.EUBHAL_01467	NA	NA
UHGV-0092779_3	COG	COG5492	NA	NA
UHGV-0092779_4	Pfam	PF00404	Dockerin type I domain	Dockerin_1
UHGV-0092779_5	PHROG	phrog_297	holin	lysis
UHGV-0092779_5	UniRef90	UniRef90_UPI0008361AF9	phage holin	NA
UHGV-0092779_5	eggNOG-mapper	553973.CLOHYLEM_04415	Bacteriophage holin	NA
UHGV-0092779_5	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0092779_5	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0092779_5	COG	COG5546	NA	NA
UHGV-0092779_5	Structural annotation	COG5546	NA	NA
UHGV-0092779_6	PHROG	phrog_1863	NA	unknown function
UHGV-0092779_6	eggNOG-mapper	428125.CLOLEP_01781	NA	NA
UHGV-0092779_7	PHROG	phrog_21825	endolysin	lysis
UHGV-0092779_7	UniRef90	UniRef90_A0A7C7ALL3	CHAP domain-containing protein	NA
UHGV-0092779_7	eggNOG-mapper	633697.EubceDRAFT1_2756	CHAP domain	NA
UHGV-0092779_7	Pfam	PF05257	CHAP domain	CHAP
UHGV-0092779_7	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0092779_7	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0092779_7	Structural annotation	PF00877, TIGR02594, COG3738	NA	NA
UHGV-0092779_8	eggNOG-mapper	1123242.JH636434_gene4797	GDSL-like Lipase/Acylhydrolase	NA
UHGV-0092779_8	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0092779_8	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0092779_10	PHROG	phrog_6616	tail protein	tail
UHGV-0092779_10	UniRef90	UniRef90_UPI00085BC306	tail fiber domain-containing protein	NA
UHGV-0092779_10	eggNOG-mapper	1121866.AUGK01000003_gene1439	Phage minor structural protein	NA
UHGV-0092779_10	COG	COG4926	Phage-related protein	NA
UHGV-0092779_11	PHROG	phrog_1194	NA	unknown function
UHGV-0092779_11	eggNOG-mapper	1151292.QEW_2422	NA	NA
UHGV-0092779_11	Pfam	PF20458	NA	DUF6711
UHGV-0092779_11	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0092779_12	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0092779_12	UniRef90	UniRef90_A0A174WQ97	Phage-like protein	NA
UHGV-0092779_12	eggNOG-mapper	33035.JPJF01000093_gene2243	phage tail tape measure protein	NA
UHGV-0092779_12	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0092779_12	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0092779_13	PHROG	phrog_8355	NA	unknown function
UHGV-0092779_13	UniRef90	UniRef90_UPI001F1300CC	bacteriophage Gp15 family protein	NA
UHGV-0092779_13	eggNOG-mapper	585501.HMPREF6123_0827	NA	NA
UHGV-0092779_14	PHROG	phrog_8300	NA	unknown function
UHGV-0092779_14	eggNOG-mapper	33035.JPJF01000093_gene2245	NA	NA
UHGV-0092779_15	PHROG	phrog_820	major tail protein	tail
UHGV-0092779_15	eggNOG-mapper	33035.JPJF01000093_gene2246	NA	NA
UHGV-0092779_15	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0092779_16	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0092779_16	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-0092779_16	eggNOG-mapper	1282664.H354_06686	NA	NA
UHGV-0092779_16	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0092779_16	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0092779_17	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0092779_17	eggNOG-mapper	483218.BACPEC_01151	NA	NA
UHGV-0092779_18	PHROG	phrog_8710	NA	unknown function
UHGV-0092779_18	eggNOG-mapper	33035.JPJF01000093_gene2249	NA	NA
UHGV-0092779_18	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0092779_19	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0092779_19	eggNOG-mapper	1298920.KI911353_gene4848	NA	NA
UHGV-0092779_20	PHROG	phrog_1378	NA	unknown function
UHGV-0092779_20	eggNOG-mapper	1298920.KI911353_gene4849	NA	NA
UHGV-0092779_21	PHROG	phrog_422	major head protein	head and packaging
UHGV-0092779_21	UniRef90	UniRef90_A0A3E2WBR9	Capsid protein	NA
UHGV-0092779_21	eggNOG-mapper	483218.BACPEC_01155	NA	NA
UHGV-0092779_21	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0092779_22	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0092779_22	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-0092779_23	eggNOG-mapper	1200557.JHWV01000022_gene2459	NA	NA
UHGV-0092779_23	Structural annotation	PF02699, MF_00369, TIGR00739, COG1862	NA	NA
UHGV-0092779_24	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0092779_24	UniRef90	UniRef90_A0A373A8K2	Minor capsid protein	NA
UHGV-0092779_24	eggNOG-mapper	33035.JPJF01000093_gene2255	NA	NA
UHGV-0092779_24	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0092779_24	Pfam	PF21814	NA	DUF6883
UHGV-0092779_24	COG	COG5585	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	NA
UHGV-0092779_24	Structural annotation	PF06152, PF21814	NA	NA
UHGV-0092779_25	PHROG	phrog_25639	NA	unknown function
UHGV-0092779_25	eggNOG-mapper	742740.HMPREF9474_03502	NA	NA
UHGV-0092779_26	PHROG	phrog_533	portal protein	head and packaging
UHGV-0092779_26	UniRef90	UniRef90_UPI001AA0FCED	capsid protein	NA
UHGV-0092779_26	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0092779_26	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0092779_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0092779_27	PHROG	phrog_10250	NA	unknown function
UHGV-0092779_27	UniRef90	UniRef90_A0A1I0K8E3	Phage terminase, large subunit, PBSX family	NA
UHGV-0092779_27	eggNOG-mapper	1304866.K413DRAFT_0811	Phage terminase, large subunit, PBSX family	NA
UHGV-0092779_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-0092779_27	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0092779_28	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0092779_28	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0092779_28	UniRef90	UniRef90_UPI0001F01BB6	terminase small subunit	NA
UHGV-0092779_28	eggNOG-mapper	1158607.UAU_05157	Terminase small subunit	NA
UHGV-0092779_28	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0092779_28	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0092779_29	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0092779_29	UniRef90	UniRef90_A0A7C6P5S1	RNA polymerase subunit sigma-24	NA
UHGV-0092779_29	eggNOG-mapper	1121335.Clst_0383	NA	NA
UHGV-0092779_29	Structural annotation	PF02996	NA	NA
UHGV-0092779_31	eggNOG-mapper	1033737.CAEV01000076_gene550	NA	NA
UHGV-0092779_32	PHROG	phrog_17260	NA	unknown function
UHGV-0092779_32	eggNOG-mapper	1265505.ATUG01000002_gene2539	NA	NA
UHGV-0092779_32	AcrCatalog	cluster_11231	NA	NA
UHGV-0092779_33	PHROG	phrog_38832	NA	unknown function
UHGV-0092779_33	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0092779_33	Structural annotation	PF18300, MF_01549, NF008636, COG4568	NA	NA
UHGV-0092779_36	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0092779_36	UniRef90	UniRef90_A0A6L9H7K0	NA	NA
UHGV-0092779_36	eggNOG-mapper	1582152.A0A0A8WI22_9CAUD	NA	NA
UHGV-0092779_36	Pfam	PF12961	NA	DUF3850
UHGV-0092779_38	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0092779_38	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0092779_38	UniRef90	UniRef90_A0A1V5S1P7	PAPS_reduct domain-containing protein	NA
UHGV-0092779_38	eggNOG-mapper	537013.CLOSTMETH_01340	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0092779_38	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0092779_38	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0092779_39	KOfam	K00590	E2.1.1.113; site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113]	NA
UHGV-0092779_39	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0092779_39	UniRef90	UniRef90_UPI001AD94F6A	site-specific DNA-methyltransferase	NA
UHGV-0092779_39	eggNOG-mapper	205918.Psyr_2825	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0092779_39	PADLOC	MTase_II_00173	Type II methyltransferase	RM
UHGV-0092779_39	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0092779_39	COG	COG0863	DNA modification methylase	NA
UHGV-0092779_39	Structural annotation	PF01555, NF008572, COG0863	NA	NA
UHGV-0092779_40	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0092779_40	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0092779_40	UniRef90	UniRef90_A0A1C6JHY9	DNA helicase	NA
UHGV-0092779_40	eggNOG-mapper	1121874.KB892380_gene1592	Participates in initiation and elongation during chromosome replication	NA
UHGV-0092779_40	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0092779_40	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0092779_40	COG	COG0305	Replicative DNA helicase	NA
UHGV-0092779_40	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0092779_41	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0092779_41	eggNOG-mapper	665956.HMPREF1032_02617	Phage replisome organizer, N-terminal domain protein	NA
UHGV-0092779_41	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0092779_41	Structural annotation	PF10771, MF_01177, TIGR01714, COG5529	NA	NA
UHGV-0092779_43	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0092779_43	UniRef90	UniRef90_R6N0P8	ERCC4 domain-containing protein	NA
UHGV-0092779_43	eggNOG-mapper	476272.RUMHYD_01740	ERCC4 domain	NA
UHGV-0092779_43	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0092779_43	COG	COG1948	ERCC4-type crossover junction endonuclease	NA
UHGV-0092779_43	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-0092779_44	PHROG	phrog_18107	NA	unknown function
UHGV-0092779_44	eggNOG-mapper	476272.RUMHYD_02831	NA	NA
UHGV-0092779_44	Structural annotation	PF05037	NA	NA
UHGV-0092779_45	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0092779_45	UniRef90	UniRef90_A0A316RHU5	ATP-binding protein	NA
UHGV-0092779_45	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0092779_45	Pfam	PF13479	AAA domain	AAA_24
UHGV-0092779_45	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0092779_51	UniRef90	UniRef90_UPI0012B58364	Arc family DNA-binding protein	NA
UHGV-0092779_51	Pfam	PF05534	HicB family	HicB
UHGV-0092779_51	Structural annotation	PF03869, NF041793, COG4877	NA	NA
UHGV-0092779_52	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-0092779_52	UniRef90	UniRef90_A0A318KGW5	ParD-like antitoxin of type II ParDE toxin-antitoxin system	NA
UHGV-0092779_52	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-0092779_52	Structural annotation	PF03869, TIGR04563, COG4877	NA	NA
UHGV-0092779_53	UniRef90	UniRef90_A0A0B1YBZ3	DNA-binding protein	NA
UHGV-0092779_53	eggNOG-mapper	1430331.EP10_02425	NA	NA
UHGV-0092779_53	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-0092779_54	Pfam	PF08667	BetR domain	BetR
UHGV-0092779_55	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0092779_55	UniRef90	UniRef90_A0A3A9I6A9	XRE family transcriptional regulator	NA
UHGV-0092779_55	eggNOG-mapper	1029718.SFBM_0097	Helix-turn-helix XRE-family like proteins	NA
UHGV-0092779_55	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0092779_55	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0092779_55	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0092779_56	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0092779_56	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0092779_56	UniRef90	UniRef90_A0A355JG00	XRE family transcriptional regulator	NA
UHGV-0092779_56	eggNOG-mapper	1123511.KB905866_gene3782	sequence-specific DNA binding	NA
UHGV-0092779_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0092779_56	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0092779_56	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0092779_58	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0092779_58	Structural annotation	PF21291, NF041951, COG3655	NA	NA