UHGV-0094228

Genome information

Genome length 49,372 bps

CDS count 76

Completeness 75.60% (medium-quality)

geNomad score 0.9805

Prediction confidence Confident

Genome information
Genome ID	UHGV-0094228
vOTU ID	vOTU-034147
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_171503
BioSample	SAMEA3136746
Country	Austria
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	75.60% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9805
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.89
Jumbo phage	No

Genome content
Genome length	49,372 bps
GC content	55.78%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	76
CDS density	90.11%
Average CDS length	588.95 bps
tRNA count	5
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0094228_1	UniRef90	UniRef90_A7A599	Outer membrane insertion signal domain protein	NA
UHGV-0094228_1	eggNOG-mapper	1435051.BMOU_0750	NA	NA
UHGV-0094228_2	KOfam	K02342	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	NA
UHGV-0094228_2	PHROG	phrog_192	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UHGV-0094228_2	UniRef90	UniRef90_A0A173ZQI2	DNA polymerase III subunit alpha	NA
UHGV-0094228_2	eggNOG-mapper	1680.BADO_0631	Exonuclease, DNA polymerase III, epsilon subunit family	NA
UHGV-0094228_2	PADLOC	cd06127	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
UHGV-0094228_2	Pfam	PF00929	Exonuclease	RNase_T
UHGV-0094228_2	COG	COG2176	DNA polymerase III, alpha subunit (gram-positive type)	NA
UHGV-0094228_2	Structural annotation	PF00929, MF_00157, NF004963, NF038219, COG0847	NA	NA
UHGV-0094228_3	Structural annotation	PF14470, NF033891, COG3402	NA	NA
UHGV-0094228_4	Structural annotation	PF07305	NA	NA
UHGV-0094228_5	PHROG	phrog_87	metallo-protease	other
UHGV-0094228_5	UniRef90	UniRef90_A7A5A2	Peptidase_M78 domain-containing protein	NA
UHGV-0094228_5	eggNOG-mapper	1435051.BMOU_0747	NA	NA
UHGV-0094228_5	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0094228_5	Structural annotation	PF06114, COG3800	NA	NA
UHGV-0094228_6	UniRef90	UniRef90_A0A412K8S3	XRE family transcriptional regulator	NA
UHGV-0094228_6	eggNOG-mapper	1435051.BMOU_0746	NA	NA
UHGV-0094228_7	PHROG	phrog_4583	transcriptional repressor	transcription regulation
UHGV-0094228_7	UniRef90	UniRef90_A0A173ZNQ3	Helix-turn-helix transcriptional regulator	NA
UHGV-0094228_7	eggNOG-mapper	1280676.AUJO01000006_gene621	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0094228_7	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0094228_7	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0094228_7	Structural annotation	PF08667, MF_00535, NF041951, COG3093	NA	NA
UHGV-0094228_9	Structural annotation	PF12989	NA	NA
UHGV-0094228_13	eggNOG-mapper	78346.BRUM_0416	NA	NA
UHGV-0094228_14	UniRef90	UniRef90_A0A6B8LJU6	Hypoyhetical protein	NA
UHGV-0094228_15	UniRef90	UniRef90_A7A5B2	HTH_17 domain-containing protein	NA
UHGV-0094228_15	eggNOG-mapper	558173.CDOO_03875	Helix-turn-helix domain	NA
UHGV-0094228_15	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0094228_15	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0094228_16	UniRef90	UniRef90_A0A6B8LMI6	Hypoyhetical protein	NA
UHGV-0094228_17	UniRef90	UniRef90_UPI001957E992	molecular chaperone GrpE	NA
UHGV-0094228_17	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0094228_17	Structural annotation	PF01047	NA	NA
UHGV-0094228_19	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0094228_19	UniRef90	UniRef90_A0A412K8R2	Endonuclease	NA
UHGV-0094228_19	eggNOG-mapper	1437610.BREU_1416	YqaJ-like viral recombinase domain	NA
UHGV-0094228_19	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0094228_19	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0094228_19	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0094228_19	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0094228_20	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0094228_20	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0094228_20	UniRef90	UniRef90_A0A173ZT77	p33	NA
UHGV-0094228_20	eggNOG-mapper	1341695.BBOMB_1056	RecT family	NA
UHGV-0094228_20	Pfam	PF03837	RecT family	RecT
UHGV-0094228_20	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0094228_20	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0094228_20	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0094228_21	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0094228_21	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0094228_21	UniRef90	UniRef90_A0A087D541	Single-stranded DNA-binding protein	NA
UHGV-0094228_21	eggNOG-mapper	78346.BRUM_0409	Single-strand binding protein family	NA
UHGV-0094228_21	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0094228_21	NCBIFam	NF005851.0	single-stranded DNA-binding protein	NA
UHGV-0094228_21	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0094228_21	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0094228_21	Structural annotation	PF00436, MF_00984, NF005851, COG0629	NA	NA
UHGV-0094228_22	UniRef90	UniRef90_A0A3D0PXF1	Ferredoxin	NA
UHGV-0094228_23	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0094228_23	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0094228_23	UniRef90	UniRef90_A0A087D540	Putative endodeoxyribonuclease RusA family protein	NA
UHGV-0094228_23	eggNOG-mapper	78346.BRUM_0408	NA	NA
UHGV-0094228_23	Structural annotation	NF007305, COG4570	NA	NA
UHGV-0094228_24	UniRef90	UniRef90_A0A1X2ZKC5	Transposase	NA
UHGV-0094228_24	eggNOG-mapper	78346.BRUM_0407	NA	NA
UHGV-0094228_24	Structural annotation	PF01815	NA	NA
UHGV-0094228_25	Structural annotation	PF08410, NF005233, COG5515	NA	NA
UHGV-0094228_27	eggNOG-mapper	1394176.AWUO01000011_gene389	NA	NA
UHGV-0094228_27	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0094228_30	Structural annotation	PF13384	NA	NA
UHGV-0094228_31	PHROG	phrog_908	NA	unknown function
UHGV-0094228_31	COG	COG2023	Ribonuclease P protein subunit RPR2	NA
UHGV-0094228_35	PHROG	phrog_13728	acetyltransferase	other
UHGV-0094228_35	UniRef90	UniRef90_A0A0G9M8K5	N-acetyltransferase domain-containing protein	NA
UHGV-0094228_35	eggNOG-mapper	395494.Galf_0898	acetyltransferase	NA
UHGV-0094228_35	Pfam	PF00583	Acetyltransferase (GNAT) family	Acetyltransf_1
UHGV-0094228_35	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0094228_37	PHROG	phrog_547	phosphoesterase	other
UHGV-0094228_37	UniRef90	UniRef90_A0A1X3A1P1	Metallophos domain-containing protein	NA
UHGV-0094228_37	eggNOG-mapper	1680.BADO_0635	phosphoesterase or phosphohydrolase	NA
UHGV-0094228_37	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0094228_37	COG	COG4186	NA	NA
UHGV-0094228_37	Structural annotation	PF12850, MF_00575, NF003743, COG4186	NA	NA
UHGV-0094228_39	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-0094228_39	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0094228_39	UniRef90	UniRef90_A0A1X2Z148	The helix-turn-helix motif	NA
UHGV-0094228_39	eggNOG-mapper	1435051.BMOU_1231	Helix-turn-helix XRE-family like proteins	NA
UHGV-0094228_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0094228_39	Structural annotation	PF13443, NF041951, COG1476	NA	NA
UHGV-0094228_40	UniRef90	UniRef90_A0A564VKW7	HTH cro/C1-type domain-containing protein	NA
UHGV-0094228_40	eggNOG-mapper	401473.BDP_1637	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0094228_40	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0094228_41	eggNOG-mapper	1435051.BMOU_1230	NA	NA
UHGV-0094228_44	eggNOG-mapper	445975.COLSTE_02319	NA	NA
UHGV-0094228_53	Structural annotation	PF06194	NA	NA
UHGV-0094228_56	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0094228_56	PHROG	phrog_333	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0094228_56	UniRef90	UniRef90_A0A0A7I6T1	HNHc domain-containing protein	NA
UHGV-0094228_56	eggNOG-mapper	1386089.N865_02065	HNH nucleases	NA
UHGV-0094228_56	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0094228_56	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0094228_57	PHROG	phrog_1271	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0094228_57	UniRef90	UniRef90_A0A5M9ZVQ2	NA	NA
UHGV-0094228_57	Structural annotation	PF01844, PF09889, MF_00649	NA	NA
UHGV-0094228_58	PHROG	phrog_226	minor tail protein	tail
UHGV-0094228_59	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0094228_59	UniRef90	UniRef90_UPI001F0F6B49	phage terminase family protein	NA
UHGV-0094228_59	eggNOG-mapper	1692.BMAGN_1441	Terminase	NA
UHGV-0094228_59	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0094228_59	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0094228_60	PHROG	phrog_104	portal protein	head and packaging
UHGV-0094228_60	UniRef90	UniRef90_A0A1X3A1Q2	Portal protein	NA
UHGV-0094228_60	eggNOG-mapper	1692.BMAGN_1442	NA	NA
UHGV-0094228_60	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0094228_61	PHROG	phrog_36668	NA	unknown function
UHGV-0094228_61	UniRef90	UniRef90_A0A7Y0EP42	NA	NA
UHGV-0094228_61	eggNOG-mapper	1692.BMAGN_1443	NA	NA
UHGV-0094228_61	Structural annotation	PF06152, TIGR01641, COG2369	NA	NA
UHGV-0094228_62	UniRef90	UniRef90_A0A087B686	Putative phage protein gp5	NA
UHGV-0094228_62	eggNOG-mapper	35760.BCHO_0841	NA	NA
UHGV-0094228_63	PHROG	phrog_3583	head decoration	head and packaging
UHGV-0094228_63	UniRef90	UniRef90_A0A087B687	Bacteriophage lambda head decoration like-protein	NA
UHGV-0094228_63	eggNOG-mapper	1692.BMAGN_1445	NA	NA
UHGV-0094228_63	Structural annotation	PF02924	NA	NA
UHGV-0094228_64	PHROG	phrog_29	major head protein	head and packaging
UHGV-0094228_64	UniRef90	UniRef90_UPI0018C2985B	major capsid protein	NA
UHGV-0094228_64	eggNOG-mapper	1692.BMAGN_1446	Phage major capsid protein E	NA
UHGV-0094228_64	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0094228_64	Structural annotation	PF03864, MF_04133, TIGR04387, COG4653	NA	NA
UHGV-0094228_65	PHROG	phrog_36776	NA	unknown function
UHGV-0094228_65	eggNOG-mapper	1692.BMAGN_1447	NA	NA
UHGV-0094228_66	PHROG	phrog_25853	NA	unknown function
UHGV-0094228_66	UniRef90	UniRef90_A0A0A7I3R4	Thiamine biosynthesis protein ThiS	NA
UHGV-0094228_66	eggNOG-mapper	35760.BCHO_0837	NA	NA
UHGV-0094228_66	Structural annotation	PF12206, COG5614	NA	NA
UHGV-0094228_67	PHROG	phrog_32608	NA	unknown function
UHGV-0094228_67	Structural annotation	PF17395	NA	NA
UHGV-0094228_68	eggNOG-mapper	35760.BCHO_0835	NA	NA
UHGV-0094228_68	Structural annotation	PF12691	NA	NA
UHGV-0094228_69	PHROG	phrog_117	major tail protein	tail
UHGV-0094228_69	UniRef90	UniRef90_A0A087AF65	Gp22	NA
UHGV-0094228_69	eggNOG-mapper	35760.BCHO_0834	NA	NA
UHGV-0094228_69	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0094228_70	PHROG	phrog_36579	NA	unknown function
UHGV-0094228_72	PHROG	phrog_305	tail length tape measure protein	tail
UHGV-0094228_72	UniRef90	UniRef90_A0A1X2Z117	Tail length tape measure protein	NA
UHGV-0094228_72	eggNOG-mapper	35760.BCHO_0831	domain protein	NA
UHGV-0094228_72	COG	COG0840	Methyl-accepting chemotaxis protein (MCP)	NA
UHGV-0094228_73	PHROG	phrog_5577	minor tail protein	tail
UHGV-0094228_73	UniRef90	UniRef90_A0A087B697	Putative phage protein gp15	NA
UHGV-0094228_73	eggNOG-mapper	35760.BCHO_0830	NA	NA
UHGV-0094228_73	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-0094228_74	PHROG	phrog_3398	virion structural protein	head and packaging
UHGV-0094228_74	UniRef90	UniRef90_A0A087B698	Putative phage protein gp45	NA
UHGV-0094228_74	eggNOG-mapper	1692.BMAGN_1457	NA	NA
UHGV-0094228_74	Structural annotation	PF05475, NF033147, COG4935	NA	NA
UHGV-0094228_75	PHROG	phrog_1885	minor tail protein	tail
UHGV-0094228_75	UniRef90	UniRef90_A0A087B699	Putative major tail protein	NA
UHGV-0094228_75	eggNOG-mapper	35760.BCHO_0828	NA	NA
UHGV-0094228_75	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0094228_76	KOfam	K16770	CNTRL; centriolin	NA
UHGV-0094228_76	PHROG	phrog_1885	minor tail protein	tail
UHGV-0094228_76	eggNOG-mapper	78346.BRUM_0385	cellulase activity	NA
UHGV-0094228_76	COG	COG4372	NA	NA