UHGV-0097733

Genome information

Genome length 22,410 bps

CDS count 35

Completeness 63.85% (medium-quality)

geNomad score 0.9796

Prediction confidence Confident

Genome information
Genome ID	UHGV-0097733
vOTU ID	vOTU-040522
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_215878
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.85% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9796
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.48
Jumbo phage	No

Genome content
Genome length	22,410 bps
GC content	29.89%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	35
CDS density	94.61%
Average CDS length	608.91 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0097733_5	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0097733_7	PHROG	phrog_1233	NA	unknown function
UHGV-0097733_7	UniRef90	UniRef90_R7IWF8	Peptidase_M78 domain-containing protein	NA
UHGV-0097733_7	Structural annotation	PF13058	NA	NA
UHGV-0097733_9	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0097733_9	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0097733_9	UniRef90	UniRef90_R6DVT6	Phage terminase large subunit PBSX family	NA
UHGV-0097733_9	eggNOG-mapper	1120998.AUFC01000030_gene2231	Phage terminase, large subunit, PBSX family	NA
UHGV-0097733_9	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0097733_9	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0097733_9	COG	COG1783	Phage terminase large subunit	NA
UHGV-0097733_9	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0097733_10	PHROG	phrog_533	portal protein	head and packaging
UHGV-0097733_10	UniRef90	UniRef90_R6Y8H1	Minor capsid protein	NA
UHGV-0097733_10	eggNOG-mapper	545697.HMPREF0216_02845	NA	NA
UHGV-0097733_10	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0097733_11	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0097733_11	UniRef90	UniRef90_R6YG84	CdiA_C domain-containing protein	NA
UHGV-0097733_11	eggNOG-mapper	1462526.BN990_03872	Phage minor capsid protein 2	NA
UHGV-0097733_11	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0097733_11	COG	COG2369	NA	NA
UHGV-0097733_11	Structural annotation	PF06152	NA	NA
UHGV-0097733_13	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0097733_13	UniRef90	UniRef90_R6XV28	Phage minor structural protein GP20	NA
UHGV-0097733_13	eggNOG-mapper	1399941.U3PIU5_9CAUD	Phage minor structural protein GP20	NA
UHGV-0097733_13	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0097733_13	Structural annotation	PF06810	NA	NA
UHGV-0097733_14	PHROG	phrog_283	major head protein	head and packaging
UHGV-0097733_14	UniRef90	UniRef90_A0A173REC9	p22 coat protein-gene protein 5	NA
UHGV-0097733_14	eggNOG-mapper	411461.DORFOR_01167	P22 coat protein - gene protein 5	NA
UHGV-0097733_14	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0097733_14	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0097733_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0097733_15	eggNOG-mapper	1449050.JNLE01000003_gene3888	NA	NA
UHGV-0097733_16	PHROG	phrog_3366	NA	unknown function
UHGV-0097733_16	eggNOG-mapper	632245.CLP_1651	NA	NA
UHGV-0097733_16	Pfam	PF20536	NA	DUF6751
UHGV-0097733_16	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0097733_17	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0097733_17	UniRef90	UniRef90_A0A174E6U4	Minor capsid	NA
UHGV-0097733_17	eggNOG-mapper	1304866.K413DRAFT_3041	NA	NA
UHGV-0097733_17	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0097733_17	Structural annotation	PF11114	NA	NA
UHGV-0097733_18	PHROG	phrog_3266	tail completion	connector
UHGV-0097733_18	UniRef90	UniRef90_UPI000DCF807F	chloramphenicol resistance protein	NA
UHGV-0097733_18	eggNOG-mapper	999411.HMPREF1092_03317	NA	NA
UHGV-0097733_18	Structural annotation	PF12691	NA	NA
UHGV-0097733_19	PHROG	phrog_3099	NA	unknown function
UHGV-0097733_19	eggNOG-mapper	469596.HMPREF9488_01325	NA	NA
UHGV-0097733_19	Structural annotation	PF09393, TIGR02126, COG5437	NA	NA
UHGV-0097733_20	PHROG	phrog_14275	NA	unknown function
UHGV-0097733_20	UniRef90	UniRef90_R6Y193	zinc_ribbon_2 domain-containing protein	NA
UHGV-0097733_20	eggNOG-mapper	1031288.AXAA01000044_gene1983	NA	NA
UHGV-0097733_20	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0097733_20	NCBIFam	NF038353.1	FxLYD domain-containing protein	NA
UHGV-0097733_20	Structural annotation	PF07233, NF038353, COG5633	NA	NA
UHGV-0097733_22	PHROG	phrog_706	NA	unknown function
UHGV-0097733_22	UniRef90	UniRef90_UPI00067E77F7	Gp15 family bacteriophage protein	NA
UHGV-0097733_22	eggNOG-mapper	469596.HMPREF9488_01327	Bacteriophage Gp15 protein	NA
UHGV-0097733_22	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0097733_22	Structural annotation	PF06854	NA	NA
UHGV-0097733_23	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0097733_23	eggNOG-mapper	1280692.AUJL01000027_gene2150	phage tail tape measure protein	NA
UHGV-0097733_23	COG	COG1511	NA	NA
UHGV-0097733_23	Structural annotation	PF09486, TIGR02559	NA	NA
UHGV-0097733_24	PHROG	phrog_1194	NA	unknown function
UHGV-0097733_24	Structural annotation	PF20458, TIGR01633, COG4718	NA	NA
UHGV-0097733_25	eggNOG-mapper	469596.HMPREF9488_01330	NA	NA
UHGV-0097733_25	Structural annotation	PF05113, PF09327, NF033848, COG3500	NA	NA
UHGV-0097733_28	PHROG	phrog_5668	tail fiber protein	tail
UHGV-0097733_28	eggNOG-mapper	573061.Clocel_0796	Phage minor structural protein	NA
UHGV-0097733_28	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0097733_28	COG	COG4926	Phage-related protein	NA
UHGV-0097733_29	Structural annotation	PF03906	NA	NA
UHGV-0097733_31	Structural annotation	PF17900	NA	NA
UHGV-0097733_34	PHROG	phrog_1129	holin	lysis
UHGV-0097733_34	UniRef90	UniRef90_A0A1Q6M1T2	Holin	NA
UHGV-0097733_34	eggNOG-mapper	1391647.AVSV01000036_gene884	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0097733_34	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0097733_34	Structural annotation	PF06946	NA	NA
UHGV-0097733_35	PHROG	phrog_9589	endolysin	lysis
UHGV-0097733_35	UniRef90	UniRef90_UPI000B195CAC	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0097733_35	eggNOG-mapper	552398.HMPREF0866_03091	CHAP domain	NA
UHGV-0097733_35	Pfam	PF05257	CHAP domain	CHAP
UHGV-0097733_35	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0097733_35	Structural annotation	PF00877, TIGR02594, COG3942	NA	NA