UHGV-0097915

Genome information

Genome length 10,204 bps

CDS count 15

Completeness 73.47% (medium-quality)

geNomad score 0.9760

Prediction confidence Confident

Genome information
Genome ID	UHGV-0097915
vOTU ID	vOTU-036264
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_218760
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.47% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9760
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.39
Jumbo phage	No

Genome content
Genome length	10,204 bps
GC content	39.62%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	15
CDS density	92.68%
Average CDS length	632.20 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0097915_3	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0097915_3	UniRef90	UniRef90_A0A843HBI5	Ig-like domain-containing protein	NA
UHGV-0097915_3	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0097915_6	PHROG	phrog_14030	NA	unknown function
UHGV-0097915_6	UniRef90	UniRef90_F7V6X7	Cell wall-associated hydrolase	NA
UHGV-0097915_6	eggNOG-mapper	1042156.CXIVA_00320	NLP P60 protein	NA
UHGV-0097915_6	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0097915_6	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0097915_6	Structural annotation	PF05382, NF033742	NA	NA
UHGV-0097915_7	Structural annotation	PF20934	NA	NA
UHGV-0097915_8	PHROG	phrog_2038	upper collar connector	connector
UHGV-0097915_8	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0097915_8	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0097915_10	PHROG	phrog_31573	NA	unknown function
UHGV-0097915_10	UniRef90	UniRef90_E2NRB6	GDSL-like protein	NA
UHGV-0097915_10	Structural annotation	PF14606, PF01664, NF007819	NA	NA
UHGV-0097915_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-0097915_11	UniRef90	UniRef90_A0A843H2X5	Phage DNA encapsidation protein	NA
UHGV-0097915_11	eggNOG-mapper	1161906.I6P9K5_9CAUD	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0097915_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0097915_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0097915_14	PHROG	phrog_11037	NA	unknown function
UHGV-0097915_14	UniRef90	UniRef90_A0A843GY68	Phage_lysozyme2 domain-containing protein	NA
UHGV-0097915_14	eggNOG-mapper	641107.CDLVIII_3773	heme binding	NA
UHGV-0097915_14	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0097915_14	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0097915_14	Structural annotation	PF18013	NA	NA