UHGV-0099121

Genome information

vOTU vOTU-020564

Genome length 19,418 bps

CDS count 25

Completeness 50.75% (medium-quality)

geNomad score 0.9822

Prediction confidence Confident

Genome information
Genome ID	UHGV-0099121
vOTU ID	vOTU-020564
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_212111
BioSample	SAMEA3449167
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.75% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9822
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.87
Jumbo phage	No

Genome content
Genome length	19,418 bps
GC content	43.19%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	25
CDS density	95.18%
Average CDS length	745.32 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0099121_1	eggNOG-mapper	1235792.C808_00065	NA	NA
UHGV-0099121_3	UniRef90	UniRef90_A0A1C5TF07	NA	NA
UHGV-0099121_3	eggNOG-mapper	742733.HMPREF9469_00921	NA	NA
UHGV-0099121_3	Structural annotation	NF041588	NA	NA
UHGV-0099121_5	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0099121_5	UniRef90	UniRef90_A0A3D3U8Q6	Sigma70_r4 domain-containing protein	NA
UHGV-0099121_5	eggNOG-mapper	411460.RUMTOR_02080	NA	NA
UHGV-0099121_5	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0099121_5	Structural annotation	PF04545, MF_00245, TIGR01636, COG2739	NA	NA
UHGV-0099121_6	Structural annotation	PF04381, MF_00194, NF001460, COG2974	NA	NA
UHGV-0099121_7	UniRef90	UniRef90_UPI00164A4990	restriction endonuclease	NA
UHGV-0099121_7	Structural annotation	PF19363, PF04471, COG1787, COG3355	NA	NA
UHGV-0099121_8	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-0099121_8	UniRef90	UniRef90_A0A3D3U9Y4	Terminase	NA
UHGV-0099121_8	eggNOG-mapper	999413.HMPREF1094_00222	DNA packaging	NA
UHGV-0099121_8	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0099121_8	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0099121_8	COG	COG5484	NA	NA
UHGV-0099121_8	Structural annotation	PF06056, NF040601, COG5484	NA	NA
UHGV-0099121_9	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0099121_9	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0099121_9	UniRef90	UniRef90_A0A3D3U8V8	PBSX family phage terminase large subunit	NA
UHGV-0099121_9	eggNOG-mapper	411902.CLOBOL_00139	Phage terminase, large subunit, PBSX family	NA
UHGV-0099121_9	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0099121_9	COG	COG1783	Phage terminase large subunit	NA
UHGV-0099121_9	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0099121_10	PHROG	phrog_533	portal protein	head and packaging
UHGV-0099121_10	UniRef90	UniRef90_A0A3D3U9V8	Phage portal protein	NA
UHGV-0099121_10	eggNOG-mapper	411902.CLOBOL_00138	NA	NA
UHGV-0099121_10	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0099121_10	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0099121_11	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0099121_11	UniRef90	UniRef90_A0A3D3U8R6	Minor capsid protein	NA
UHGV-0099121_11	eggNOG-mapper	1235799.C818_04219	Phage minor capsid protein 2	NA
UHGV-0099121_11	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0099121_11	COG	COG2369	NA	NA
UHGV-0099121_11	Structural annotation	PF06152	NA	NA
UHGV-0099121_12	PHROG	phrog_15041	NA	unknown function
UHGV-0099121_12	eggNOG-mapper	1304866.K413DRAFT_0808	NA	NA
UHGV-0099121_12	Structural annotation	PF10827	NA	NA
UHGV-0099121_13	PHROG	phrog_918	NA	unknown function
UHGV-0099121_13	UniRef90	UniRef90_UPI00189D39C2	NA	NA
UHGV-0099121_13	eggNOG-mapper	1256908.HMPREF0373_00480	NA	NA
UHGV-0099121_13	Pfam	PF19791	NA	DUF6275
UHGV-0099121_13	Structural annotation	PF19791	NA	NA
UHGV-0099121_14	UniRef90	UniRef90_A0A416MNJ4	NA	NA
UHGV-0099121_14	eggNOG-mapper	97138.C820_00250	NA	NA
UHGV-0099121_15	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0099121_15	UniRef90	UniRef90_A0A1C5P0Y8	Phage minor structural protein GP20	NA
UHGV-0099121_15	eggNOG-mapper	411902.CLOBOL_00135	COG NOG36366 non supervised orthologous group	NA
UHGV-0099121_15	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0099121_15	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0099121_16	PHROG	phrog_10	major head protein	head and packaging
UHGV-0099121_16	UniRef90	UniRef90_A0A3D3U8R7	Phage major capsid protein	NA
UHGV-0099121_16	eggNOG-mapper	411902.CLOBOL_00134	Phage capsid family	NA
UHGV-0099121_16	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0099121_16	Pfam	PF17802	Prealbumin-like fold domain	SpaA
UHGV-0099121_16	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0099121_16	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0099121_16	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0099121_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0099121_17	eggNOG-mapper	411902.CLOBOL_00133	NA	NA
UHGV-0099121_18	PHROG	phrog_3366	NA	unknown function
UHGV-0099121_18	Structural annotation	PF20536	NA	NA
UHGV-0099121_19	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0099121_19	UniRef90	UniRef90_UPI001C3B04D8	Minor capsid protein	NA
UHGV-0099121_19	eggNOG-mapper	411461.DORFOR_01170	Minor capsid protein	NA
UHGV-0099121_19	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0099121_19	Structural annotation	PF11114	NA	NA
UHGV-0099121_20	PHROG	phrog_3266	tail completion	connector
UHGV-0099121_20	eggNOG-mapper	663278.Ethha_0098	NA	NA
UHGV-0099121_20	Structural annotation	PF12691	NA	NA
UHGV-0099121_21	PHROG	phrog_820	major tail protein	tail
UHGV-0099121_21	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-0099121_21	eggNOG-mapper	411461.DORFOR_01172	NA	NA
UHGV-0099121_21	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0099121_23	PHROG	phrog_706	NA	unknown function
UHGV-0099121_23	UniRef90	UniRef90_A0A1M6B1I0	Bacteriophage Gp15 protein	NA
UHGV-0099121_23	eggNOG-mapper	411461.DORFOR_01174	Bacteriophage Gp15 protein	NA
UHGV-0099121_23	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0099121_23	Structural annotation	PF06854	NA	NA
UHGV-0099121_24	KOfam	K10402	KIF20; kinesin family member 20	NA
UHGV-0099121_24	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0099121_24	UniRef90	UniRef90_UPI001C01D4D2	phage tail tape measure protein	NA
UHGV-0099121_24	eggNOG-mapper	411483.FAEPRAA2165_01911	Phage tail tape measure protein, TP901 family	NA
UHGV-0099121_24	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0099121_24	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0099121_24	COG	COG5283	Phage-related tail protein	NA
UHGV-0099121_24	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA