UHGV-0100897

Genome information

Genome length 27,185 bps

CDS count 43

Completeness 57.30% (medium-quality)

geNomad score 0.9742

Prediction confidence Confident

Genome information
Genome ID	UHGV-0100897
vOTU ID	vOTU-026491
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_204132
BioSample	SAMEA3449357
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.30% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9742
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.91
Jumbo phage	No

Genome content
Genome length	27,185 bps
GC content	27.85%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	43
CDS density	95.01%
Average CDS length	606.07 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0100897_3	Structural annotation	PF09871, TIGR00739, COG4014	NA	NA
UHGV-0100897_7	PHROG	phrog_11947	NA	unknown function
UHGV-0100897_7	eggNOG-mapper	663278.Ethha_1254	luxR family	NA
UHGV-0100897_7	COG	COG2771	DNA-binding transcriptional regulator, CsgD family	NA
UHGV-0100897_8	PHROG	phrog_1569	NA	unknown function
UHGV-0100897_8	UniRef90	UniRef90_A0A354MD93	S-adenosylmethionine synthetase	NA
UHGV-0100897_8	eggNOG-mapper	1035184.HMPREF1042_1352	S-adenosylmethionine synthetase, N-terminal domain	NA
UHGV-0100897_8	Pfam	PF00438	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
UHGV-0100897_8	COG	COG0192	S-adenosylmethionine synthetase	NA
UHGV-0100897_9	UniRef90	UniRef90_F9MTS2	Conserved domain protein	NA
UHGV-0100897_9	eggNOG-mapper	1120978.KB894081_gene101	S-adenosylmethionine synthetase, N-terminal domain	NA
UHGV-0100897_9	COG	COG0192	S-adenosylmethionine synthetase	NA
UHGV-0100897_12	PHROG	phrog_1558	NA	unknown function
UHGV-0100897_12	UniRef90	UniRef90_UPI00177FE924	HTH domain-containing protein	NA
UHGV-0100897_12	eggNOG-mapper	755731.Clo1100_0540	NA	NA
UHGV-0100897_12	Structural annotation	PF06530, TIGR01636, COG2739	NA	NA
UHGV-0100897_13	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0100897_13	UniRef90	UniRef90_A0A354MD90	Transcriptional regulator	NA
UHGV-0100897_13	eggNOG-mapper	742740.HMPREF9474_01226	ParB-like nuclease domain	NA
UHGV-0100897_13	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0100897_13	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0100897_13	COG	COG0863	DNA modification methylase	NA
UHGV-0100897_13	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0100897_14	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0100897_14	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0100897_14	UniRef90	UniRef90_A0A354MD89	Cytosine-specific methyltransferase	NA
UHGV-0100897_14	eggNOG-mapper	649747.HMPREF0083_01686	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0100897_14	PADLOC	MTase_II_00164	Type II methyltransferase	RM
UHGV-0100897_14	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0100897_14	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0100897_14	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0100897_14	Structural annotation	PF00145, MF_02237, TIGR00675, COG0270	NA	NA
UHGV-0100897_15	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0100897_15	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0100897_15	UniRef90	UniRef90_A0A0P9DFR7	Methyltransferase	NA
UHGV-0100897_15	eggNOG-mapper	398512.JQKC01000005_gene5433	NA	NA
UHGV-0100897_15	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0100897_15	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0100897_15	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0100897_15	COG	COG0863	DNA modification methylase	NA
UHGV-0100897_15	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0100897_16	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0100897_16	UniRef90	UniRef90_R5ZAG3	Phage-related terminase small subunit YqaS	NA
UHGV-0100897_16	eggNOG-mapper	1444309.JAQG01000013_gene1950	NA	NA
UHGV-0100897_16	COG	COG5484	NA	NA
UHGV-0100897_16	Structural annotation	PF01920, NF040601, COG5484	NA	NA
UHGV-0100897_17	UniRef90	UniRef90_R7F9E5	Phage terminase large subunit PBSX family	NA
UHGV-0100897_17	eggNOG-mapper	903814.ELI_3215	Phage terminase large subunit	NA
UHGV-0100897_17	COG	COG1783	Phage terminase large subunit	NA
UHGV-0100897_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0100897_18	PHROG	phrog_10250	NA	unknown function
UHGV-0100897_18	UniRef90	UniRef90_A5MYN4	Phage-related protein	NA
UHGV-0100897_18	eggNOG-mapper	431943.CKL_1870	phage terminase, large subunit, PBSX family	NA
UHGV-0100897_18	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0100897_18	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0100897_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-0100897_18	Structural annotation	PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0100897_19	PHROG	phrog_64	portal protein	head and packaging
UHGV-0100897_19	UniRef90	UniRef90_R7FCN6	Phage portal protein SPP1 family	NA
UHGV-0100897_19	eggNOG-mapper	1118054.CAGW01000107_gene3672	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0100897_19	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0100897_19	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0100897_20	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0100897_20	UniRef90	UniRef90_R7FAI1	Phage head morphogenesis protein SPP1 gp7 family	NA
UHGV-0100897_20	eggNOG-mapper	1582156.A0A0A8WIE7_9CAUD	Phage Mu protein F like protein	NA
UHGV-0100897_20	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0100897_20	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0100897_20	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0100897_20	Structural annotation	PF15542, PF04233, TIGR01641, COG2369	NA	NA
UHGV-0100897_21	PHROG	phrog_1865	NA	unknown function
UHGV-0100897_21	Structural annotation	PF07073, MF_01077, NF037951, COG4568	NA	NA
UHGV-0100897_22	UniRef90	UniRef90_R7F9F3	Phage minor structural protein GP20	NA
UHGV-0100897_22	Structural annotation	PF06810	NA	NA
UHGV-0100897_23	PHROG	phrog_909	major head protein	head and packaging
UHGV-0100897_23	UniRef90	UniRef90_R7FKI7	NA	NA
UHGV-0100897_23	eggNOG-mapper	1078085.HMPREF1210_01145	NA	NA
UHGV-0100897_23	Structural annotation	PF02924	NA	NA
UHGV-0100897_24	PHROG	phrog_29	major head protein	head and packaging
UHGV-0100897_24	UniRef90	UniRef90_R7FCP0	NA	NA
UHGV-0100897_24	eggNOG-mapper	1296662.S5MP36_9CAUD	Phage major capsid protein E	NA
UHGV-0100897_24	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0100897_24	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0100897_25	UniRef90	UniRef90_R7FK50	Rho_N domain-containing protein	NA
UHGV-0100897_27	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0100897_27	UniRef90	UniRef90_R7F9G0	NA	NA
UHGV-0100897_27	eggNOG-mapper	357809.Cphy_2962	NA	NA
UHGV-0100897_27	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0100897_28	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0100897_28	UniRef90	UniRef90_UPI0003672CDC	HK97 gp10 family phage protein	NA
UHGV-0100897_28	eggNOG-mapper	1123511.KB905868_gene178	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0100897_28	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0100897_28	Structural annotation	PF04883, TIGR01725, COG5005	NA	NA
UHGV-0100897_29	PHROG	phrog_525	NA	unknown function
UHGV-0100897_29	UniRef90	UniRef90_R6YTI0	NA	NA
UHGV-0100897_29	eggNOG-mapper	546273.VEIDISOL_01062	NA	NA
UHGV-0100897_29	Pfam	PF20765	NA	DUF6838
UHGV-0100897_29	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0100897_30	PHROG	phrog_966	NA	unknown function
UHGV-0100897_30	UniRef90	UniRef90_T3DFM8	Putative phage protein	NA
UHGV-0100897_30	eggNOG-mapper	1151292.QEW_1341	NA	NA
UHGV-0100897_31	PHROG	phrog_279	tail sheath	tail
UHGV-0100897_31	UniRef90	UniRef90_A0A354MD75	Phage tail protein	NA
UHGV-0100897_31	eggNOG-mapper	696281.Desru_1315	PFAM Phage tail sheath protein	NA
UHGV-0100897_31	Pfam	PF17481	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
UHGV-0100897_31	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0100897_31	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0100897_31	Structural annotation	PF17482, PF04984, PF17481, COG4386	NA	NA
UHGV-0100897_32	PHROG	phrog_365	tail protein	tail
UHGV-0100897_32	UniRef90	UniRef90_R7FA15	NA	NA
UHGV-0100897_32	eggNOG-mapper	357809.Cphy_2957	Phage tail tube protein	NA
UHGV-0100897_32	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0100897_32	Structural annotation	PF09393, TIGR02241, COG5437	NA	NA
UHGV-0100897_33	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0100897_33	UniRef90	UniRef90_R7FCP8	Phage XkdN-like protein	NA
UHGV-0100897_33	eggNOG-mapper	1274374.CBLK010000063_gene812	Phage portal protein	NA
UHGV-0100897_33	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0100897_33	Structural annotation	PF08890, COG4518	NA	NA
UHGV-0100897_34	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-0100897_34	UniRef90	UniRef90_A0A7X8EUD7	Tape measure protein (Fragment)	NA
UHGV-0100897_34	eggNOG-mapper	642492.Clole_2746	tape measure	NA
UHGV-0100897_34	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0100897_34	COG	COG5281	Phage-related minor tail protein	NA
UHGV-0100897_35	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-0100897_35	UniRef90	UniRef90_A0A143ZUJ0	TMP_3 domain-containing protein	NA
UHGV-0100897_35	eggNOG-mapper	610130.Closa_1404	tape measure	NA
UHGV-0100897_35	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0100897_35	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0100897_35	COG	COG5281	Phage-related minor tail protein	NA
UHGV-0100897_36	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-0100897_36	eggNOG-mapper	552396.HMPREF0863_00318	tape measure	NA
UHGV-0100897_36	COG	COG5281	Phage-related minor tail protein	NA
UHGV-0100897_37	KOfam	K22409	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0100897_37	PHROG	phrog_380	endolysin	lysis
UHGV-0100897_37	UniRef90	UniRef90_R7A479	LysM domain	NA
UHGV-0100897_37	eggNOG-mapper	608534.GCWU000341_02281	PFAM LysM domain	NA
UHGV-0100897_37	Pfam	PF01476	LysM domain	LysM
UHGV-0100897_37	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0100897_37	Structural annotation	PF21821, TIGR02126, COG3499	NA	NA
UHGV-0100897_38	PHROG	phrog_400	tail protein	tail
UHGV-0100897_38	UniRef90	UniRef90_A0A354MD70	Hydrolase	NA
UHGV-0100897_38	eggNOG-mapper	742740.HMPREF9474_02342	PFAM Phage late control gene D protein (GPD)	NA
UHGV-0100897_38	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-0100897_38	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0100897_39	PHROG	phrog_579	NA	unknown function
UHGV-0100897_39	UniRef90	UniRef90_UPI0018AA7FDA	NA	NA
UHGV-0100897_39	eggNOG-mapper	642492.Clole_2743	NA	NA
UHGV-0100897_39	Pfam	PF10844	NA	DUF2577
UHGV-0100897_39	Structural annotation	PF10844	NA	NA
UHGV-0100897_40	PHROG	phrog_120	baseplate protein	tail
UHGV-0100897_40	UniRef90	UniRef90_R6YTF8	Putative phage protein	NA
UHGV-0100897_40	eggNOG-mapper	1411095.X5JB38_9CAUD	lytic transglycosylase activity	NA
UHGV-0100897_40	Pfam	PF10934	NA	DUF2634
UHGV-0100897_40	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0100897_41	PHROG	phrog_6	baseplate protein	tail
UHGV-0100897_41	UniRef90	UniRef90_R6Z8F5	Baseplate J family protein	NA
UHGV-0100897_41	eggNOG-mapper	642492.Clole_2741	baseplate J-like protein	NA
UHGV-0100897_41	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0100897_41	COG	COG3299	NA	NA
UHGV-0100897_41	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0100897_42	PHROG	phrog_521	tail protein	tail
UHGV-0100897_42	UniRef90	UniRef90_A0A8A4STK3	NA	NA
UHGV-0100897_42	eggNOG-mapper	1226322.HMPREF1545_04034	NA	NA
UHGV-0100897_42	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0100897_42	COG	COG3778	NA	NA
UHGV-0100897_42	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-0100897_43	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0100897_43	UniRef90	UniRef90_A0A8I2FAR7	Phage tail protein (Fragment)	NA
UHGV-0100897_43	eggNOG-mapper	1117108.PAALTS15_09815	Phage tail-collar fibre protein	NA
UHGV-0100897_43	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0100897_43	COG	COG5301	Phage-related tail fiber protein	NA