UHGV-0101765

Genome information

Genome length 33,739 bps

CDS count 41

Completeness 87.67% (medium-quality)

geNomad score 0.9808

Prediction confidence Confident

Genome information
Genome ID	UHGV-0101765
vOTU ID	vOTU-015229
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_233199
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.67% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9808
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.62
Jumbo phage	No

Genome content
Genome length	33,739 bps
GC content	59.01%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	41
CDS density	93.88%
Average CDS length	775.17 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0101765_1	eggNOG-mapper	665956.HMPREF1032_01630	Transcription termination factor nusG	NA
UHGV-0101765_1	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-0101765_3	PHROG	phrog_24579	terminase small subunit	head and packaging
UHGV-0101765_3	UniRef90	UniRef90_A0A1Y4TKH5	HTH_Tnp_1_2 domain-containing protein	NA
UHGV-0101765_4	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0101765_4	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0101765_4	UniRef90	UniRef90_A0A0D8J425	Terminase	NA
UHGV-0101765_4	eggNOG-mapper	411471.SUBVAR_06998	Phage terminase, large subunit, PBSX family	NA
UHGV-0101765_4	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0101765_4	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0101765_4	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0101765_4	COG	COG1783	Phage terminase large subunit	NA
UHGV-0101765_4	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0101765_6	PHROG	phrog_533	portal protein	head and packaging
UHGV-0101765_6	UniRef90	UniRef90_D1PRG7	Putative phage minor capsid protein	NA
UHGV-0101765_6	eggNOG-mapper	411471.SUBVAR_06996	NA	NA
UHGV-0101765_6	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0101765_7	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0101765_7	UniRef90	UniRef90_UPI0006814CA4	phage minor capsid protein	NA
UHGV-0101765_7	eggNOG-mapper	411471.SUBVAR_06995	NA	NA
UHGV-0101765_7	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0101765_7	COG	COG2369	NA	NA
UHGV-0101765_7	Structural annotation	PF06152	NA	NA
UHGV-0101765_9	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0101765_9	UniRef90	UniRef90_A0A4R1QTK7	Minor structural protein GP20	NA
UHGV-0101765_9	eggNOG-mapper	411471.SUBVAR_06994	Phage minor structural protein GP20	NA
UHGV-0101765_9	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0101765_9	Structural annotation	PF06810	NA	NA
UHGV-0101765_10	PHROG	phrog_422	major head protein	head and packaging
UHGV-0101765_10	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-0101765_10	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0101765_11	PHROG	phrog_10541	NA	unknown function
UHGV-0101765_11	UniRef90	UniRef90_UPI001967F4C6	Rho termination factor N-terminal domain-containing protein	NA
UHGV-0101765_11	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-0101765_11	COG	COG5492	NA	NA
UHGV-0101765_11	Structural annotation	PF09124	NA	NA
UHGV-0101765_12	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0101765_12	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0101765_12	Pfam	PF13262	NA	DUF4054
UHGV-0101765_14	UniRef90	UniRef90_UPI0019D0AD4B	minor capsid protein	NA
UHGV-0101765_14	eggNOG-mapper	936375.HMPREF1152_1079	NA	NA
UHGV-0101765_14	Structural annotation	PF11114	NA	NA
UHGV-0101765_15	PHROG	phrog_3266	tail completion	connector
UHGV-0101765_15	Structural annotation	PF20765	NA	NA
UHGV-0101765_16	PHROG	phrog_820	major tail protein	tail
UHGV-0101765_16	COG	COG5492	NA	NA
UHGV-0101765_16	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0101765_18	PHROG	phrog_706	NA	unknown function
UHGV-0101765_18	UniRef90	UniRef90_A0A1I3QPX8	Bacteriophage Gp15 protein	NA
UHGV-0101765_18	eggNOG-mapper	1321782.HMPREF1986_02275	Bacteriophage Gp15 protein	NA
UHGV-0101765_18	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0101765_19	PHROG	phrog_23464	NA	unknown function
UHGV-0101765_19	eggNOG-mapper	926561.KB900622_gene636	phage tail tape measure protein	NA
UHGV-0101765_19	COG	COG5283	Phage-related tail protein	NA
UHGV-0101765_19	Structural annotation	PF20155, TIGR01760, COG5280	NA	NA
UHGV-0101765_20	UniRef90	UniRef90_A0A3D0W045	Fibronectin type-III domain-containing protein	NA
UHGV-0101765_20	Structural annotation	PF02010, PF06995, MF_04116, NF010681, COG3401, COG3499	NA	NA
UHGV-0101765_21	PHROG	phrog_26795	NA	unknown function
UHGV-0101765_21	UniRef90	UniRef90_A0A5J6T4K8	Minor tail protein	NA
UHGV-0101765_21	eggNOG-mapper	997296.PB1_16154	NA	NA
UHGV-0101765_21	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0101765_23	Structural annotation	PF10651, COG4675	NA	NA
UHGV-0101765_24	PHROG	phrog_16573	NA	unknown function
UHGV-0101765_24	eggNOG-mapper	1160721.RBI_I01572	NA	NA
UHGV-0101765_24	Structural annotation	PF10651, COG5513	NA	NA
UHGV-0101765_25	PHROG	phrog_5555	tail protein	tail
UHGV-0101765_25	UniRef90	UniRef90_A0A372V0Z2	Prophage_tail domain-containing protein	NA
UHGV-0101765_25	eggNOG-mapper	999413.HMPREF1094_00205	NA	NA
UHGV-0101765_25	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0101765_25	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0101765_25	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0101765_25	COG	COG4926	Phage-related protein	NA
UHGV-0101765_25	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0101765_26	UniRef90	UniRef90_R6N293	Putative phage tail component domain protein	NA
UHGV-0101765_26	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0101765_27	PHROG	phrog_19074	NA	unknown function
UHGV-0101765_27	UniRef90	UniRef90_A0A372V0T3	Phage tail tape measure protein	NA
UHGV-0101765_27	eggNOG-mapper	1235792.C808_05377	Phage tail tape measure protein, TP901 family	NA
UHGV-0101765_27	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0101765_27	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0101765_27	COG	COG5283	Phage-related tail protein	NA
UHGV-0101765_27	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0101765_28	UniRef90	UniRef90_A0A6I2UAE0	Com family DNA-binding transcriptional regulator	NA
UHGV-0101765_28	eggNOG-mapper	536233.CLO_0895	Mu-like prophage protein Com	NA
UHGV-0101765_28	Pfam	PF10122	NA	Mu-like_Com
UHGV-0101765_29	PHROG	phrog_706	NA	unknown function
UHGV-0101765_29	UniRef90	UniRef90_UPI0003F799BE	bacteriophage Gp15 family protein	NA
UHGV-0101765_29	eggNOG-mapper	1280692.AUJL01000004_gene837	Bacteriophage Gp15 protein	NA
UHGV-0101765_29	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0101765_29	Structural annotation	PF06854	NA	NA
UHGV-0101765_30	PHROG	phrog_4450	NA	unknown function
UHGV-0101765_30	UniRef90	UniRef90_A0A372V0T5	AP endonuclease	NA
UHGV-0101765_30	eggNOG-mapper	1540257.JQMW01000013_gene735	NA	NA
UHGV-0101765_30	Pfam	PF20378	NA	DUF6673
UHGV-0101765_30	Structural annotation	PF20378	NA	NA
UHGV-0101765_31	PHROG	phrog_3099	NA	unknown function
UHGV-0101765_31	UniRef90	UniRef90_A0A3D0XTH5	S-l_SbsC_C domain-containing protein	NA
UHGV-0101765_31	eggNOG-mapper	903814.ELI_3202	NA	NA
UHGV-0101765_32	PHROG	phrog_3266	tail completion	connector
UHGV-0101765_32	eggNOG-mapper	663278.Ethha_0098	NA	NA
UHGV-0101765_32	Structural annotation	PF12691	NA	NA
UHGV-0101765_33	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0101765_33	UniRef90	UniRef90_A0A372V1A7	Capsid protein	NA
UHGV-0101765_33	eggNOG-mapper	1120746.CCNL01000014_gene2100	Minor capsid protein	NA
UHGV-0101765_33	Structural annotation	PF11114	NA	NA
UHGV-0101765_34	PHROG	phrog_3366	NA	unknown function
UHGV-0101765_34	eggNOG-mapper	411471.SUBVAR_06991	NA	NA
UHGV-0101765_34	Pfam	PF20536	NA	DUF6751
UHGV-0101765_34	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0101765_35	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0101765_36	UniRef90	UniRef90_A0A6I2U7V7	C2H2-type domain-containing protein	NA
UHGV-0101765_37	PHROG	phrog_422	major head protein	head and packaging
UHGV-0101765_37	eggNOG-mapper	665956.HMPREF1032_02951	NA	NA
UHGV-0101765_37	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0101765_38	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0101765_38	UniRef90	UniRef90_A0A6N3F6J3	Phage minor structural protein GP20	NA
UHGV-0101765_38	eggNOG-mapper	665956.HMPREF1032_02952	Phage minor structural protein GP20	NA
UHGV-0101765_38	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0101765_38	Structural annotation	PF06810	NA	NA
UHGV-0101765_40	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0101765_40	UniRef90	UniRef90_A0A6N3F6N5	Epidermal cell differentiation inhibitor	NA
UHGV-0101765_40	eggNOG-mapper	665956.HMPREF1032_02954	NA	NA
UHGV-0101765_40	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0101765_40	COG	COG2369	NA	NA
UHGV-0101765_40	Structural annotation	PF06152, PF07737, TIGR01641, COG2369	NA	NA
UHGV-0101765_41	PHROG	phrog_533	portal protein	head and packaging
UHGV-0101765_41	eggNOG-mapper	411471.SUBVAR_06996	NA	NA