UHGV-0103099

Genome information

Genome length 35,101 bps

CDS count 50

Completeness 61.36% (medium-quality)

geNomad score 0.9789

Prediction confidence Confident

Genome information
Genome ID	UHGV-0103099
vOTU ID	vOTU-038154
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_201409
BioSample	NA
Country	United Kingdom
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.36% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9789
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.12
Jumbo phage	No

Genome content
Genome length	35,101 bps
GC content	38.40%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	91.10%
Average CDS length	642.90 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0103099_1	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0103099_1	eggNOG-mapper	357276.EL88_11510	NA	NA
UHGV-0103099_2	UniRef90	UniRef90_A0A5M5DX18	Nmad5 domain-containing protein	NA
UHGV-0103099_2	Pfam	PF18757	Nucleotide modification associated domain 5	Nmad5
UHGV-0103099_2	Structural annotation	PF18757	NA	NA
UHGV-0103099_3	PHROG	phrog_10608	NA	unknown function
UHGV-0103099_3	eggNOG-mapper	272559.BF9343_2324	NA	NA
UHGV-0103099_4	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0103099_4	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0103099_4	UniRef90	UniRef90_UPI0018A01643	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0103099_4	eggNOG-mapper	435590.BVU_2854	Endodeoxyribonuclease RusA	NA
UHGV-0103099_4	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0103099_4	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0103099_5	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0103099_5	UniRef90	UniRef90_A0A174JNZ9	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit	NA
UHGV-0103099_5	eggNOG-mapper	445970.ALIPUT_01604	NA	NA
UHGV-0103099_5	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0103099_5	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0103099_5	Structural annotation	PF14297, TIGR01714	NA	NA
UHGV-0103099_6	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0103099_6	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0103099_6	UniRef90	UniRef90_A0A174JGJ7	DNA helicase	NA
UHGV-0103099_6	eggNOG-mapper	1077285.AGDG01000032_gene4173	Participates in initiation and elongation during chromosome replication	NA
UHGV-0103099_6	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0103099_6	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0103099_6	COG	COG0305	Replicative DNA helicase	NA
UHGV-0103099_6	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0103099_7	UniRef90	UniRef90_UPI001E296F76	host-nuclease inhibitor Gam family protein	NA
UHGV-0103099_7	eggNOG-mapper	411901.BACCAC_01185	NA	NA
UHGV-0103099_8	Structural annotation	PF13601, MF_01819, NF008565, COG1733	NA	NA
UHGV-0103099_12	PHROG	phrog_9236	pyrophosphatase	other
UHGV-0103099_12	eggNOG-mapper	411901.BACCAC_01178	NA	NA
UHGV-0103099_12	Structural annotation	PF08761, COG4508	NA	NA
UHGV-0103099_13	PHROG	phrog_28609	NA	unknown function
UHGV-0103099_13	eggNOG-mapper	357276.EL88_11370	NA	NA
UHGV-0103099_14	PHROG	phrog_38368	NA	unknown function
UHGV-0103099_14	eggNOG-mapper	762982.HMPREF9442_01208	NA	NA
UHGV-0103099_15	PHROG	phrog_940	nuclease	DNA, RNA and nucleotide metabolism
UHGV-0103099_15	UniRef90	UniRef90_A0A1Y4V3G6	ParB domain-containing protein	NA
UHGV-0103099_15	eggNOG-mapper	762968.HMPREF9441_00586	NA	NA
UHGV-0103099_15	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0103099_15	Pfam	PF14386	NA	DUF4417
UHGV-0103099_15	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0103099_15	Structural annotation	PF14386, PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0103099_18	PHROG	phrog_15125	NA	unknown function
UHGV-0103099_18	UniRef90	UniRef90_F3QSL2	Conserved domain protein	NA
UHGV-0103099_18	eggNOG-mapper	762968.HMPREF9441_00582	NA	NA
UHGV-0103099_19	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0103099_19	UniRef90	UniRef90_A0A174JFB0	Transposase and inactivated derivatives	NA
UHGV-0103099_19	eggNOG-mapper	445970.ALIPUT_01193	domain protein	NA
UHGV-0103099_19	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0103099_19	COG	COG5410	NA	NA
UHGV-0103099_19	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0103099_20	PHROG	phrog_64	portal protein	head and packaging
UHGV-0103099_20	UniRef90	UniRef90_A0A642MCJ9	Phage portal protein	NA
UHGV-0103099_20	eggNOG-mapper	445970.ALIPUT_01192	phage portal protein, SPP1	NA
UHGV-0103099_20	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0103099_20	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0103099_21	PHROG	phrog_5824	NA	unknown function
UHGV-0103099_21	eggNOG-mapper	445970.ALIPUT_00706	NA	NA
UHGV-0103099_22	PHROG	phrog_9196	NA	unknown function
UHGV-0103099_22	eggNOG-mapper	742767.HMPREF9456_03320	Head fiber protein	NA
UHGV-0103099_22	Structural annotation	PF21430, NF009633	NA	NA
UHGV-0103099_23	PHROG	phrog_29	major head protein	head and packaging
UHGV-0103099_23	UniRef90	UniRef90_A0A1Y4JJG0	Major capsid protein E	NA
UHGV-0103099_23	eggNOG-mapper	445970.ALIPUT_00704	NA	NA
UHGV-0103099_23	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0103099_23	Structural annotation	PF03864, MF_04133, NF041162, COG4834	NA	NA
UHGV-0103099_24	PHROG	phrog_7935	NA	unknown function
UHGV-0103099_24	eggNOG-mapper	435591.BDI_0886	NA	NA
UHGV-0103099_24	Pfam	PF20449	NA	DUF6706
UHGV-0103099_24	Structural annotation	PF20449	NA	NA
UHGV-0103099_25	PHROG	phrog_16482	NA	unknown function
UHGV-0103099_25	eggNOG-mapper	762982.HMPREF9442_01180	NA	NA
UHGV-0103099_25	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0103099_26	PHROG	phrog_5597	NA	unknown function
UHGV-0103099_26	eggNOG-mapper	1268240.ATFI01000021_gene159	NA	NA
UHGV-0103099_26	Structural annotation	PF16807, TIGR01633	NA	NA
UHGV-0103099_27	PHROG	phrog_14600	NA	unknown function
UHGV-0103099_27	UniRef90	UniRef90_R6ZP18	Conserved domain protein	NA
UHGV-0103099_27	eggNOG-mapper	762982.HMPREF9442_01184	NA	NA
UHGV-0103099_27	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0103099_28	PHROG	phrog_13669	NA	unknown function
UHGV-0103099_28	eggNOG-mapper	1268240.ATFI01000021_gene161	NA	NA
UHGV-0103099_28	Structural annotation	PF20336	NA	NA
UHGV-0103099_29	PHROG	phrog_14740	NA	unknown function
UHGV-0103099_29	eggNOG-mapper	762968.HMPREF9441_00570	NA	NA
UHGV-0103099_30	PHROG	phrog_5377	NA	unknown function
UHGV-0103099_30	eggNOG-mapper	1077285.AGDG01000032_gene4183	NA	NA
UHGV-0103099_31	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-0103099_31	PHROG	phrog_14295	NA	unknown function
UHGV-0103099_31	UniRef90	UniRef90_A0A174JE48	Chromosome segregation protein	NA
UHGV-0103099_31	eggNOG-mapper	470145.BACCOP_03725	protein involved in control of spindle dynamics together with kar3p K00870	NA
UHGV-0103099_31	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0103099_31	Structural annotation	PF14235	NA	NA
UHGV-0103099_34	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0103099_34	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0103099_34	UniRef90	UniRef90_UPI001E3B824F	phage regulatory protein/antirepressor Ant	NA
UHGV-0103099_34	eggNOG-mapper	449673.BACSTE_00571	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0103099_34	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0103099_34	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0103099_34	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-0103099_38	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0103099_38	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0103099_38	UniRef90	UniRef90_A0A412C0G2	Phage antirepressor	NA
UHGV-0103099_38	eggNOG-mapper	1347393.HG726026_gene2597	BRO family, N-terminal domain	NA
UHGV-0103099_38	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0103099_38	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0103099_38	COG	COG3617	Prophage antirepressor	NA
UHGV-0103099_39	PHROG	phrog_26299	NA	unknown function
UHGV-0103099_39	eggNOG-mapper	411476.BACOVA_03935	NA	NA
UHGV-0103099_40	PHROG	phrog_6195	tail protein	tail
UHGV-0103099_40	UniRef90	UniRef90_UPI001C3FEA83	ABC transporter	NA
UHGV-0103099_40	eggNOG-mapper	449673.BACSTE_00574	NA	NA
UHGV-0103099_42	PHROG	phrog_24272	NA	unknown function
UHGV-0103099_42	eggNOG-mapper	449673.BACSTE_00576	NA	NA
UHGV-0103099_42	Structural annotation	PF08813, TIGR02126, COG5437	NA	NA
UHGV-0103099_43	PHROG	phrog_23418	NA	unknown function
UHGV-0103099_43	eggNOG-mapper	449673.BACSTE_00577	NA	NA
UHGV-0103099_43	Structural annotation	PF08873	NA	NA
UHGV-0103099_44	eggNOG-mapper	1122971.BAME01000143_gene6480	NA	NA
UHGV-0103099_44	Structural annotation	PF20459	NA	NA
UHGV-0103099_46	PHROG	phrog_10	major head protein	head and packaging
UHGV-0103099_46	UniRef90	UniRef90_UPI001C8BBE18	phage major capsid protein	NA
UHGV-0103099_46	eggNOG-mapper	449673.BACSTE_00580	Phage capsid family	NA
UHGV-0103099_46	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0103099_46	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0103099_46	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0103099_46	Structural annotation	PF05065, MF_04113, TIGR01554, COG4653	NA	NA
UHGV-0103099_47	KOfam	K06904	NA	NA
UHGV-0103099_47	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0103099_47	UniRef90	UniRef90_A0A412C073	HK97 family phage prohead protease	NA
UHGV-0103099_47	eggNOG-mapper	449673.BACSTE_00581	Caudovirus prohead serine protease	NA
UHGV-0103099_47	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0103099_47	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0103099_47	COG	COG3740	Phage head maturation protease	NA
UHGV-0103099_47	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0103099_48	PHROG	phrog_12	portal protein	head and packaging
UHGV-0103099_48	UniRef90	UniRef90_UPI001C3F90E1	phage portal protein	NA
UHGV-0103099_48	eggNOG-mapper	449673.BACSTE_00582	Phage portal protein	NA
UHGV-0103099_48	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0103099_48	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0103099_49	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0103099_49	UniRef90	UniRef90_UPI001E4A4717	phage terminase large subunit	NA
UHGV-0103099_49	eggNOG-mapper	449673.BACSTE_00583	domain protein	NA
UHGV-0103099_49	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0103099_49	COG	COG5410	NA	NA
UHGV-0103099_49	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0103099_50	UniRef90	UniRef90_UPI0018AA4272	terminase small subunit	NA
UHGV-0103099_50	eggNOG-mapper	1347393.HG726031_gene3965	Terminase small subunit	NA
UHGV-0103099_50	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0103099_50	COG	COG3728	Phage terminase, small subunit	NA