UHGV-0110373

Genome information

Genome length 14,128 bps

CDS count 19

Completeness 99.90% (high-quality)

geNomad score 0.9794

Prediction confidence Confident

Genome information
Genome ID	UHGV-0110373
vOTU ID	vOTU-014776
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_249756
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	5
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9794
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	-3.84
Jumbo phage	No

Genome content
Genome length	14,128 bps
GC content	34.97%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	19
CDS density	95.39%
Average CDS length	716.37 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0110373_1	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0110373_1	UniRef90	UniRef90_A0A316S5V3	DNA-directed DNA polymerase	NA
UHGV-0110373_1	eggNOG-mapper	1128071.G9J3H2_9CAUD	nucleotide binding	NA
UHGV-0110373_1	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0110373_1	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-0110373_8	Structural annotation	PF17427	NA	NA
UHGV-0110373_9	PHROG	phrog_2150	terminase	head and packaging
UHGV-0110373_9	UniRef90	UniRef90_A0A2Z4GUD4	DNA encapsidation protein	NA
UHGV-0110373_9	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0110373_9	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0110373_11	Structural annotation	PF18342, NF041850, COG4991	NA	NA
UHGV-0110373_13	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0110373_13	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0110373_14	Structural annotation	PF20934	NA	NA
UHGV-0110373_15	PHROG	phrog_11037	NA	unknown function
UHGV-0110373_15	UniRef90	UniRef90_A0A316SHS7	Phage_lysozyme2 domain-containing protein	NA
UHGV-0110373_15	eggNOG-mapper	1235796.C815_01287	pathogenesis	NA
UHGV-0110373_15	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0110373_15	COG	COG3942	Surface antigen	NA
UHGV-0110373_15	Structural annotation	PF18013	NA	NA
UHGV-0110373_16	PHROG	phrog_2038	upper collar connector	connector
UHGV-0110373_16	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-0110373_16	eggNOG-mapper	10747.Q37995_BPCP1	Phage Connector (GP10)	NA
UHGV-0110373_16	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0110373_16	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0110373_18	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0110373_18	UniRef90	UniRef90_A0A316S9E2	SGNH_hydro domain-containing protein (Fragment)	NA
UHGV-0110373_18	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0110373_18	Structural annotation	PF16255, PF08931, NF007819, COG2755	NA	NA
UHGV-0110373_19	KOfam	K00854	xylB, XYLB; xylulokinase [EC:2.7.1.17]	NA
UHGV-0110373_19	PHROG	phrog_19397	NA	unknown function
UHGV-0110373_19	UniRef90	UniRef90_A0A174L762	Carbohydrate kinase	NA
UHGV-0110373_19	eggNOG-mapper	411476.BACOVA_02533	Carbohydrate kinase, FGGY family protein	NA
UHGV-0110373_19	Pfam	PF00370	FGGY family of carbohydrate kinases, N-terminal domain	FGGY_N
UHGV-0110373_19	Pfam	PF02782	FGGY family of carbohydrate kinases, C-terminal domain	FGGY_C
UHGV-0110373_19	COG	COG1070	Sugar (pentulose or hexulose) kinase	NA