UHGV-0125866

Genome information

Genome length 13,113 bps

CDS count 20

Completeness 94.41% (high-quality)

geNomad score 0.9710

Prediction confidence Confident

Genome information
Genome ID	UHGV-0125866
vOTU ID	vOTU-064536
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_312289
BioSample	SAMEA37063168
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.41% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	5
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9710
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.11
Jumbo phage	No

Genome content
Genome length	13,113 bps
GC content	38.89%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	20
CDS density	95.31%
Average CDS length	627.15 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0125866_3	PHROG	phrog_31573	NA	unknown function
UHGV-0125866_3	UniRef90	UniRef90_UPI0018ABD2BC	SGNH/GDSL hydrolase family protein	NA
UHGV-0125866_3	Structural annotation	PF14606, PF01664, NF007819	NA	NA
UHGV-0125866_5	PHROG	phrog_2038	upper collar connector	connector
UHGV-0125866_5	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-0125866_5	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0125866_5	Structural annotation	PF05352, MF_04135, TIGR01538	NA	NA
UHGV-0125866_6	Structural annotation	PF20934	NA	NA
UHGV-0125866_7	KOfam	K20742	ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]	NA
UHGV-0125866_7	PHROG	phrog_329	minor tail protein	tail
UHGV-0125866_7	UniRef90	UniRef90_A0A2G8N264	NlpC/P60 family protein	NA
UHGV-0125866_7	eggNOG-mapper	1211579.PP4_51570	pfam nlp p60	NA
UHGV-0125866_7	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0125866_7	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0125866_7	Structural annotation	PF00877, NF008096, COG0791	NA	NA
UHGV-0125866_9	Structural annotation	PF08948	NA	NA
UHGV-0125866_10	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0125866_10	UniRef90	UniRef90_A0A843HBI5	Ig-like domain-containing protein	NA
UHGV-0125866_10	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0125866_12	PHROG	phrog_2150	terminase	head and packaging
UHGV-0125866_12	UniRef90	UniRef90_A0A843GFY2	Phage DNA encapsidation protein	NA
UHGV-0125866_12	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0125866_12	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0125866_12	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0125866_13	KOfam	K06412	spoVG; stage V sporulation protein G	NA
UHGV-0125866_13	UniRef90	UniRef90_A0A2H6EL73	Putative septation protein SpoVG	NA
UHGV-0125866_13	eggNOG-mapper	1191523.MROS_0806	sporulation resulting in formation of a cellular spore	NA
UHGV-0125866_13	Pfam	PF04026	SpoVG	SpoVG
UHGV-0125866_13	COG	COG2088	DNA-binding protein SpoVG, cell septation regulator	NA
UHGV-0125866_13	Structural annotation	PF04026, MF_00819, NF009749, COG2088	NA	NA
UHGV-0125866_15	Structural annotation	PF13774	NA	NA
UHGV-0125866_17	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0125866_17	UniRef90	UniRef90_A0A843HKL5	DNA-directed DNA polymerase	NA
UHGV-0125866_17	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0125866_17	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA