UHGV-0131684

Genome information

Genome length 24,726 bps

CDS count 36

Completeness 100.00% (complete)

geNomad score 0.9654

Prediction confidence Confident

Genome information
Genome ID	UHGV-0131684
vOTU ID	vOTU-051688
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_365993
BioSample	SAMN03283244
Country	Peru
Virus prediction confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9654
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	7.71
Jumbo phage	No

Genome content
Genome length	24,726 bps
GC content	29.66%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	36
CDS density	91.62%
Average CDS length	632.50 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0131684_3	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0131684_3	eggNOG-mapper	397288.C806_03052	domain protein	NA
UHGV-0131684_3	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0131684_9	PHROG	phrog_8781	endolysin	lysis
UHGV-0131684_9	UniRef90	UniRef90_UPI000BBD266E	SH3 domain-containing protein	NA
UHGV-0131684_9	eggNOG-mapper	411462.DORLON_00669	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0131684_9	Pfam	PF05257	CHAP domain	CHAP
UHGV-0131684_9	Pfam	PF07538	Clostridial hydrophobic W	ChW
UHGV-0131684_9	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0131684_9	Structural annotation	PF05382, TIGR02594, COG5492, COG3942	NA	NA
UHGV-0131684_13	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0131684_13	UniRef90	UniRef90_A5TX20	Possible bacteriophage endonuclease	NA
UHGV-0131684_13	eggNOG-mapper	393480.FNP_1672	YqaJ viral recombinase family	NA
UHGV-0131684_13	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0131684_13	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0131684_13	Structural annotation	PF10926, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0131684_15	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0131684_15	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0131684_15	UniRef90	UniRef90_F1LGM2	Single-stranded DNA-binding protein	NA
UHGV-0131684_15	eggNOG-mapper	1408416.JNJT01000009_gene1279	single-stranded DNA binding	NA
UHGV-0131684_15	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0131684_15	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0131684_15	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0131684_15	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0131684_15	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0131684_19	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0131684_19	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0131684_19	UniRef90	UniRef90_A0A1I0E836	Recombination protein RecT	NA
UHGV-0131684_19	eggNOG-mapper	1121947.AUHK01000002_gene917	RecT family	NA
UHGV-0131684_19	Pfam	PF03837	RecT family	RecT
UHGV-0131684_19	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0131684_19	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0131684_19	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0131684_22	PHROG	phrog_284	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0131684_22	eggNOG-mapper	537007.BLAHAN_05294	NA	NA
UHGV-0131684_24	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0131684_24	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0131684_24	UniRef90	UniRef90_UPI0007E4626E	ParB/Srx family N-terminal domain-containing protein	NA
UHGV-0131684_24	eggNOG-mapper	591001.Acfer_1080	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0131684_24	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0131684_24	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0131684_24	COG	COG0863	DNA modification methylase	NA
UHGV-0131684_24	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0131684_25	KOfam	K21527	mom; adenine modification enzyme [EC:2.3.1.-]	NA
UHGV-0131684_25	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0131684_25	UniRef90	UniRef90_UPI0008D97699	protein Mom	NA
UHGV-0131684_25	eggNOG-mapper	663241.C9E2P8_9CAUD	NA	NA
UHGV-0131684_25	Structural annotation	PF16092, MF_02210, NF007025, COG0456	NA	NA
UHGV-0131684_26	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0131684_26	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0131684_26	UniRef90	UniRef90_A0A0X8KME6	Terminase	NA
UHGV-0131684_26	eggNOG-mapper	646413.C5IUJ1_9CAUD	Pfam:Terminase_3C	NA
UHGV-0131684_26	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0131684_26	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0131684_29	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0131684_29	COG	COG2369	NA	NA