UHGV-0137096

Genome information

Genome length 30,835 bps

CDS count 36

Completeness 76.94% (medium-quality)

geNomad score 0.9798

Prediction confidence Confident

Genome information
Genome ID	UHGV-0137096
vOTU ID	vOTU-032487
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_370139
BioSample	SAMN03281016
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	76.94% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	32
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9798
Virus hallmark genes (geNomad)	16
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	76.96
Jumbo phage	No

Genome content
Genome length	30,835 bps
GC content	51.26%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	36
CDS density	92.05%
Average CDS length	789.42 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0137096_1	PHROG	phrog_36550	NA	unknown function
UHGV-0137096_1	UniRef90	UniRef90_A0A1X1M1J5	DinI family protein	NA
UHGV-0137096_1	eggNOG-mapper	1399774.JDWH01000044_gene1728	DinI-like family	NA
UHGV-0137096_1	Pfam	PF06183	DinI-like family	DinI
UHGV-0137096_2	PHROG	phrog_1591	tail fiber protein	tail
UHGV-0137096_2	UniRef90	UniRef90_A0A3R9W5H0	Phage tail protein	NA
UHGV-0137096_2	eggNOG-mapper	693444.D782_2460	NA	NA
UHGV-0137096_2	Structural annotation	PF12195	NA	NA
UHGV-0137096_3	PHROG	phrog_2589	tail protein	tail
UHGV-0137096_3	UniRef90	UniRef90_UPI00125A15FD	phage tail protein	NA
UHGV-0137096_3	eggNOG-mapper	1147145.K7P840_9CAUD	Putative phage tail protein	NA
UHGV-0137096_3	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-0137096_3	Pfam	PF09327	NA	DUF1983
UHGV-0137096_3	Structural annotation	PF09327, PF13550, PF16323, PF16383, PF14109, NF040662, COG4733	NA	NA
UHGV-0137096_4	PHROG	phrog_32	tail assembly protein	tail
UHGV-0137096_4	UniRef90	UniRef90_A0A263VK99	Tail assembly protein	NA
UHGV-0137096_4	eggNOG-mapper	1147151.K7PHE5_9CAUD	virus tail assembly	NA
UHGV-0137096_4	Pfam	PF06805	Bacteriophage lambda tail assembly protein I	Lambda_tail_I
UHGV-0137096_4	Structural annotation	PF06805, NF008347, COG4723	NA	NA
UHGV-0137096_5	PHROG	phrog_2320	NA	unknown function
UHGV-0137096_5	eggNOG-mapper	1297863.APJF01000027_gene2328	NA	NA
UHGV-0137096_6	KOfam	K21140	mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]	NA
UHGV-0137096_6	PHROG	phrog_30	minor tail protein	tail
UHGV-0137096_6	UniRef90	UniRef90_A0A7Z8BXK9	Peptidase P60	NA
UHGV-0137096_6	eggNOG-mapper	1147157.K7PJX1_9CAUD	peptidoglycan catabolic process	NA
UHGV-0137096_6	Pfam	PF14464	Prokaryotic homologs of the JAB domain	Prok-JAB
UHGV-0137096_6	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0137096_6	Structural annotation	PF14464, PF00877, NF041370, TIGR02219, COG1310, COG0791	NA	NA
UHGV-0137096_7	PHROG	phrog_18	minor tail protein	tail
UHGV-0137096_7	UniRef90	UniRef90_Q9MCS1	Gp18	NA
UHGV-0137096_7	eggNOG-mapper	906668.G8C7J7_9CAUD	Phage minor tail protein L	NA
UHGV-0137096_7	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-0137096_7	NCBIFam	TIGR01600.1	phage minor tail protein L	NA
UHGV-0137096_7	Structural annotation	PF05100, TIGR01600, COG4672	NA	NA
UHGV-0137096_8	PHROG	phrog_14	minor tail protein	tail
UHGV-0137096_8	UniRef90	UniRef90_K7P828	Minor tail protein	NA
UHGV-0137096_8	eggNOG-mapper	432200.K7P7R1_9CAUD	Phage minor tail protein	NA
UHGV-0137096_8	Pfam	PF05939	Phage minor tail protein	Phage_min_tail
UHGV-0137096_8	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-0137096_9	PHROG	phrog_339	tail length tape measure protein	tail
UHGV-0137096_9	UniRef90	UniRef90_UPI00123BB193	phage tail tape measure protein	NA
UHGV-0137096_9	eggNOG-mapper	906668.G8C7J5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0137096_9	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0137096_9	Pfam	PF06120	Tail length tape measure protein	Phage_HK97_TLTM
UHGV-0137096_9	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-0137096_9	NCBIFam	TIGR01541.1	phage tail tape measure protein	NA
UHGV-0137096_9	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-0137096_10	PHROG	phrog_5031	NA	unknown function
UHGV-0137096_10	UniRef90	UniRef90_Q9MCS4	Gp15	NA
UHGV-0137096_10	eggNOG-mapper	1147157.K7PH36_9CAUD	YebO-like protein	NA
UHGV-0137096_10	Pfam	PF13974	YebO-like protein	YebO
UHGV-0137096_11	PHROG	phrog_14766	tail protein	tail
UHGV-0137096_11	UniRef90	UniRef90_A0A6S5JNV0	Phage tail protein	NA
UHGV-0137096_11	eggNOG-mapper	1147157.K7PJX0_9CAUD	NA	NA
UHGV-0137096_11	Pfam	PF13227	NA	DUF4035
UHGV-0137096_11	Structural annotation	PF06223, TIGR01715	NA	NA
UHGV-0137096_12	PHROG	phrog_14766	tail protein	tail
UHGV-0137096_12	UniRef90	UniRef90_A0A411GER6	Phage tail protein	NA
UHGV-0137096_12	eggNOG-mapper	911008.GLAD_04137	tail assembly chaperone	NA
UHGV-0137096_12	Pfam	PF06222	Phage tail assembly chaperone	Phage_TAC_1
UHGV-0137096_12	Structural annotation	PF06222	NA	NA
UHGV-0137096_13	PHROG	phrog_11009	NA	unknown function
UHGV-0137096_13	UniRef90	UniRef90_K7P835	Major tail subunit	NA
UHGV-0137096_13	eggNOG-mapper	1147157.K7PHL2_9CAUD	NA	NA
UHGV-0137096_13	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0137096_13	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-0137096_14	PHROG	phrog_347	tail terminator	connector
UHGV-0137096_14	UniRef90	UniRef90_UPI000939EAE1	NA	NA
UHGV-0137096_14	eggNOG-mapper	1147157.K7PM93_9CAUD	NA	NA
UHGV-0137096_14	Pfam	PF11367	NA	DUF3168
UHGV-0137096_14	Structural annotation	PF11367	NA	NA
UHGV-0137096_15	PHROG	phrog_23409	NA	unknown function
UHGV-0137096_15	UniRef90	UniRef90_A0A6G4LJN0	HK97 gp10 family phage protein	NA
UHGV-0137096_15	eggNOG-mapper	432201.K7P7Y7_9CAUD	exonuclease activity	NA
UHGV-0137096_15	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0137096_15	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0137096_15	Structural annotation	TIGR01725	NA	NA
UHGV-0137096_16	PHROG	phrog_25	head closure Hc1	connector
UHGV-0137096_16	UniRef90	UniRef90_A0A0M3EWB3	Head-tail adaptor protein	NA
UHGV-0137096_16	eggNOG-mapper	35703.DQ02_21675	head-tail adaptor	NA
UHGV-0137096_16	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0137096_16	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0137096_16	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0137096_16	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0137096_17	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0137096_17	UniRef90	UniRef90_A0A385ELR1	Phage gp6-like head-tail connector protein	NA
UHGV-0137096_17	eggNOG-mapper	1399774.JDWH01000034_gene1974	Phage gp6-like head-tail connector protein	NA
UHGV-0137096_17	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0137096_17	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0137096_17	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0137096_18	PHROG	phrog_5463	NA	unknown function
UHGV-0137096_18	UniRef90	UniRef90_K7PHI6	Head-tail connector I	NA
UHGV-0137096_18	eggNOG-mapper	1399774.JDWH01000034_gene1973	NA	NA
UHGV-0137096_18	Structural annotation	PF01281	NA	NA
UHGV-0137096_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-0137096_19	UniRef90	UniRef90_A0A133LP05	Phage major capsid protein, HK97 family	NA
UHGV-0137096_19	eggNOG-mapper	1399774.JDWH01000035_gene2224	capsid protein	NA
UHGV-0137096_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0137096_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0137096_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0137096_19	Structural annotation	PF05065, MF_04113, TIGR01554, COG4653	NA	NA
UHGV-0137096_20	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0137096_20	PHROG	phrog_1684	head maturation protease	head and packaging
UHGV-0137096_20	UniRef90	UniRef90_A0A837F7M9	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0137096_20	eggNOG-mapper	1147150.K7PH05_9CAUD	Clp protease	NA
UHGV-0137096_20	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0137096_20	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0137096_21	PHROG	phrog_12	portal protein	head and packaging
UHGV-0137096_21	UniRef90	UniRef90_A0A330G3S9	Phage portal protein	NA
UHGV-0137096_21	eggNOG-mapper	1147150.K7PJU5_9CAUD	Phage portal protein	NA
UHGV-0137096_21	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0137096_21	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0137096_21	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0137096_22	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0137096_22	UniRef90	UniRef90_A0A2P5GP33	Terminase	NA
UHGV-0137096_22	eggNOG-mapper	1147150.K7PKT2_9CAUD	Phage Terminase	NA
UHGV-0137096_22	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0137096_22	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0137096_22	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0137096_23	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0137096_23	UniRef90	UniRef90_K7PHI2	Terminase small subunit	NA
UHGV-0137096_23	eggNOG-mapper	1147150.K7PHI2_9CAUD	Phage terminase, small subunit	NA
UHGV-0137096_23	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0137096_23	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0137096_23	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0137096_24	PHROG	phrog_4160	NA	unknown function
UHGV-0137096_24	UniRef90	UniRef90_A0A3S7DA29	HNHc domain-containing protein	NA
UHGV-0137096_24	eggNOG-mapper	469660.A8HP87_9CAUD	endonuclease activity	NA
UHGV-0137096_25	PHROG	phrog_854	glucosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-0137096_25	UniRef90	UniRef90_A0A7I7E0V2	Bacteriophage protein	NA
UHGV-0137096_25	eggNOG-mapper	1147158.K7PGW6_9CAUD	transferase activity	NA
UHGV-0137096_25	Structural annotation	PF03071, TIGR03937, COG3306	NA	NA
UHGV-0137096_26	PHROG	phrog_6806	NA	unknown function
UHGV-0137096_27	PHROG	phrog_11851	NA	unknown function
UHGV-0137096_28	PHROG	phrog_1579	glycosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-0137096_28	UniRef90	UniRef90_UPI000E2ECC1F	glycosyltransferase family 2 protein	NA
UHGV-0137096_28	eggNOG-mapper	1147158.K7PKP3_9CAUD	transferase activity	NA
UHGV-0137096_28	Pfam	PF00535	Glycosyl transferase family 2	Glycos_transf_2
UHGV-0137096_28	Structural annotation	PF03414, PF13641, MF_01520, TIGR03965, NF041524, COG1216, COG1442	NA	NA
UHGV-0137096_29	PHROG	phrog_16910	NA	unknown function
UHGV-0137096_29	UniRef90	UniRef90_UPI001495B4DB	NA	NA
UHGV-0137096_29	eggNOG-mapper	10713.M9NZE9_BPPH8	NA	NA
UHGV-0137096_30	PHROG	phrog_1026	Rz-like spanin	lysis
UHGV-0137096_30	eggNOG-mapper	911008.GLAD_00551	NA	NA
UHGV-0137096_31	KOfam	K22918	ttsA; typhoid toxin secretion A	NA
UHGV-0137096_31	PHROG	phrog_12853	NA	unknown function
UHGV-0137096_31	UniRef90	UniRef90_A0A0V9JGI2	PG_binding_3 domain-containing protein	NA
UHGV-0137096_31	eggNOG-mapper	911008.GLAD_00552	secretion activating protein	NA
UHGV-0137096_31	Pfam	PF05838	Glycosyl hydrolase 108	Glyco_hydro_108
UHGV-0137096_31	Pfam	PF09374	Predicted Peptidoglycan domain	PG_binding_3
UHGV-0137096_31	COG	COG3926	Lysozyme family protein	NA
UHGV-0137096_31	Structural annotation	PF05838, PF09374, NF040573, COG3926	NA	NA
UHGV-0137096_32	PHROG	phrog_217	holin	lysis
UHGV-0137096_32	UniRef90	UniRef90_A0A8H9TP83	Phage holin family protein	NA
UHGV-0137096_32	eggNOG-mapper	469595.CSAG_00950	Putative 3TM holin, Phage_holin_3	NA
UHGV-0137096_32	Pfam	PF05449	Putative 3TM holin, Phage_holin_3	Phage_holin_3_7
UHGV-0137096_33	PHROG	phrog_198	holin	lysis
UHGV-0137096_33	UniRef90	UniRef90_A0A8E6MF23	Phage holin family protein	NA
UHGV-0137096_33	eggNOG-mapper	754331.AEME01000001_gene4288	Putative phage holin	NA
UHGV-0137096_33	Pfam	PF16931	Putative phage holin	Phage_holin_8
UHGV-0137096_33	Structural annotation	PF16931	NA	NA
UHGV-0137096_34	PHROG	phrog_7003	NA	unknown function
UHGV-0137096_34	eggNOG-mapper	94122.Shewana3_2179	NA	NA
UHGV-0137096_35	PHROG	phrog_127	anti-termination protein Q-like	transcription regulation
UHGV-0137096_35	UniRef90	UniRef90_A0A0F1AY06	Molecular chaperone	NA
UHGV-0137096_35	eggNOG-mapper	1197719.A464_2031	Antitermination protein	NA
UHGV-0137096_35	Pfam	PF03589	Antitermination protein	Antiterm
UHGV-0137096_35	COG	COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	NA
UHGV-0137096_35	HAMAP	MF_04158	Antitermination protein Q [Q]	NA
UHGV-0137096_35	Structural annotation	PF03589, PF00684, MF_04158, TIGR02642	NA	NA
UHGV-0137096_36	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-0137096_36	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0137096_36	UniRef90	UniRef90_A0A0J6MQJ8	DNA replication protein	NA
UHGV-0137096_36	eggNOG-mapper	1397284.AYMN01000067_gene2197	Toprim-like	NA
UHGV-0137096_36	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0137096_36	Pfam	PF13481	AAA domain	AAA_25
UHGV-0137096_36	COG	COG0305	Replicative DNA helicase	NA