UHGV-0141748

Genome information

Genome length 31,167 bps

CDS count 50

Completeness 97.43% (high-quality)

geNomad score 0.9803

Prediction confidence Confident

Genome information
Genome ID	UHGV-0141748
vOTU ID	vOTU-079513
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_404390
BioSample	SAMN05414925
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.43% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9803
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	65.21
Jumbo phage	No

Genome content
Genome length	31,167 bps
GC content	52.92%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	92.86%
Average CDS length	583.44 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0141748_1	PHROG	phrog_24267	NA	unknown function
UHGV-0141748_1	UniRef90	UniRef90_G4Q8U0	Side tail fiber protein from lambdoid prophage Rac	NA
UHGV-0141748_1	eggNOG-mapper	568816.Acin_1822	Collagen triple helix repeat (20 copies)	NA
UHGV-0141748_1	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0141748_3	eggNOG-mapper	568816.Acin_1300	NA	NA
UHGV-0141748_4	PHROG	phrog_6465	tail protein	tail
UHGV-0141748_4	UniRef90	UniRef90_UPI0008EFFA34	phage tail protein	NA
UHGV-0141748_4	eggNOG-mapper	568816.Acin_1301	tail collar domain protein	NA
UHGV-0141748_4	COG	COG4675	Phage tail collar domain	NA
UHGV-0141748_4	Structural annotation	PF12571, MF_04106, COG5301	NA	NA
UHGV-0141748_5	PHROG	phrog_521	tail protein	tail
UHGV-0141748_5	UniRef90	UniRef90_UPI0008E678DD	NA	NA
UHGV-0141748_5	eggNOG-mapper	568816.Acin_1302	NA	NA
UHGV-0141748_5	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0141748_5	COG	COG3778	NA	NA
UHGV-0141748_5	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-0141748_6	PHROG	phrog_6	baseplate protein	tail
UHGV-0141748_6	UniRef90	UniRef90_UPI0008F32837	baseplate J/gp47 family protein	NA
UHGV-0141748_6	eggNOG-mapper	1273103.NM10_00999	Baseplate J-like protein	NA
UHGV-0141748_6	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0141748_6	COG	COG3299	NA	NA
UHGV-0141748_6	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0141748_7	PHROG	phrog_120	baseplate protein	tail
UHGV-0141748_7	UniRef90	UniRef90_UPI0008EA0D5A	NA	NA
UHGV-0141748_7	eggNOG-mapper	1273103.NM10_01004	NA	NA
UHGV-0141748_7	Pfam	PF10934	NA	DUF2634
UHGV-0141748_7	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0141748_8	PHROG	phrog_579	NA	unknown function
UHGV-0141748_8	UniRef90	UniRef90_UPI000417DD77	NA	NA
UHGV-0141748_8	eggNOG-mapper	568816.Acin_1961	NA	NA
UHGV-0141748_8	Pfam	PF10844	NA	DUF2577
UHGV-0141748_8	Structural annotation	PF10844, TIGR00523	NA	NA
UHGV-0141748_9	PHROG	phrog_400	tail protein	tail
UHGV-0141748_9	UniRef90	UniRef90_I0GWS1	Phage related protein	NA
UHGV-0141748_9	eggNOG-mapper	568816.Acin_1331	NLP P60 protein	NA
UHGV-0141748_9	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0141748_9	Structural annotation	PF14594, PF00877, NF033848, NF008096, COG3500	NA	NA
UHGV-0141748_10	PHROG	phrog_5184	NA	unknown function
UHGV-0141748_10	UniRef90	UniRef90_UPI0018973606	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0141748_10	eggNOG-mapper	568816.Acin_1963	LysM domain	NA
UHGV-0141748_10	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0141748_10	Structural annotation	PF19266, TIGR02126, COG3499	NA	NA
UHGV-0141748_11	PHROG	phrog_991	tail length tape measure protein	tail
UHGV-0141748_11	UniRef90	UniRef90_UPI0008E2892B	phage tail tape measure protein	NA
UHGV-0141748_11	eggNOG-mapper	568816.Acin_1333	Phage-related minor tail protein	NA
UHGV-0141748_11	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0141748_11	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0141748_11	COG	COG5283	Phage-related tail protein	NA
UHGV-0141748_11	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0141748_13	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0141748_13	UniRef90	UniRef90_I0GWR7	Phage related protein	NA
UHGV-0141748_13	eggNOG-mapper	568816.Acin_1336	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0141748_13	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0141748_13	Structural annotation	PF08890	NA	NA
UHGV-0141748_14	PHROG	phrog_365	tail protein	tail
UHGV-0141748_14	UniRef90	UniRef90_UPI0008E6ECEF	phage tail tube protein	NA
UHGV-0141748_14	eggNOG-mapper	568816.Acin_1337	Phage tail tube protein	NA
UHGV-0141748_14	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0141748_14	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0141748_15	PHROG	phrog_1480	tail sheath	tail
UHGV-0141748_15	UniRef90	UniRef90_UPI001D0053A4	phage tail sheath subtilisin-like domain-containing protein	NA
UHGV-0141748_15	eggNOG-mapper	568816.Acin_1338	Phage tail sheath C-terminal domain	NA
UHGV-0141748_15	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0141748_15	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0141748_15	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0141748_16	PHROG	phrog_525	NA	unknown function
UHGV-0141748_16	eggNOG-mapper	1408324.JNJK01000006_gene1386	NA	NA
UHGV-0141748_16	Pfam	PF20765	NA	DUF6838
UHGV-0141748_16	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0141748_17	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0141748_17	UniRef90	UniRef90_UPI0008EBDF4A	HK97 gp10 family phage protein	NA
UHGV-0141748_17	eggNOG-mapper	293826.Amet_2418	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0141748_17	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0141748_17	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0141748_18	PHROG	phrog_25	head closure Hc1	connector
UHGV-0141748_18	UniRef90	UniRef90_UPI0008E4FD65	phage head closure protein	NA
UHGV-0141748_18	eggNOG-mapper	568816.Acin_1341	Phage head-tail joining protein	NA
UHGV-0141748_18	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0141748_18	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0141748_18	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0141748_19	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0141748_19	UniRef90	UniRef90_UPI0008F4045A	head-tail connector protein	NA
UHGV-0141748_19	eggNOG-mapper	1178540.BA70_16530	Phage gp6-like head-tail connector protein	NA
UHGV-0141748_19	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0141748_19	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0141748_19	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0141748_20	PHROG	phrog_10	major head protein	head and packaging
UHGV-0141748_20	UniRef90	UniRef90_UPI0008E39BFA	phage major capsid protein	NA
UHGV-0141748_20	eggNOG-mapper	1341151.ASZU01000004_gene260	Phage capsid family	NA
UHGV-0141748_20	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0141748_20	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0141748_20	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0141748_20	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0141748_21	KOfam	K06904	NA	NA
UHGV-0141748_21	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0141748_21	UniRef90	UniRef90_UPI000417BB79	HK97 family phage prohead protease	NA
UHGV-0141748_21	eggNOG-mapper	1235755.ANAM01000006_gene2374	Caudovirus prohead serine protease	NA
UHGV-0141748_21	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0141748_21	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0141748_21	COG	COG3740	Phage head maturation protease	NA
UHGV-0141748_21	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0141748_22	PHROG	phrog_12	portal protein	head and packaging
UHGV-0141748_22	UniRef90	UniRef90_UPI0008E4F720	phage portal protein	NA
UHGV-0141748_22	eggNOG-mapper	1094508.Tsac_2426	Portal protein	NA
UHGV-0141748_22	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0141748_22	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0141748_22	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0141748_23	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0141748_23	UniRef90	UniRef90_UPI0008F04707	terminase large subunit	NA
UHGV-0141748_23	eggNOG-mapper	1235793.C809_01917	Phage Terminase	NA
UHGV-0141748_23	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0141748_23	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0141748_23	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0141748_23	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0141748_24	PHROG	phrog_1066	NA	unknown function
UHGV-0141748_24	eggNOG-mapper	445975.COLSTE_02166	NA	NA
UHGV-0141748_24	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-0141748_25	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0141748_25	UniRef90	UniRef90_A0A7I8D7V4	Sigma70_r4_2 domain-containing protein	NA
UHGV-0141748_25	eggNOG-mapper	679201.HMPREF9334_00472	NA	NA
UHGV-0141748_25	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0141748_26	PHROG	phrog_236	nucleotide kinase	other
UHGV-0141748_26	UniRef90	UniRef90_UPI001C432084	NA	NA
UHGV-0141748_26	eggNOG-mapper	1033743.CAES01000020_gene3148	NA	NA
UHGV-0141748_26	Pfam	PF11753	NA	DUF3310
UHGV-0141748_30	PHROG	phrog_824	NA	unknown function
UHGV-0141748_30	UniRef90	UniRef90_UPI0008E257B7	VRR-NUC domain-containing protein	NA
UHGV-0141748_30	eggNOG-mapper	1123288.SOV_4c02500	Archaeal holliday junction resolvase (hjc)	NA
UHGV-0141748_31	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0141748_31	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0141748_31	UniRef90	UniRef90_UPI0008F2889A	single-stranded DNA-binding protein	NA
UHGV-0141748_31	eggNOG-mapper	591001.Acfer_0039	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0141748_31	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0141748_31	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0141748_31	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0141748_31	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0141748_31	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0141748_32	PHROG	phrog_774	NA	unknown function
UHGV-0141748_35	UniRef90	UniRef90_A0A1I0VIB3	MazG nucleotide pyrophosphohydrolase domain-containing protein	NA
UHGV-0141748_40	PHROG	phrog_4880	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-0141748_40	UniRef90	UniRef90_UPI0008DA0128	phage replisome organizer N-terminal domain-containing protein	NA
UHGV-0141748_40	eggNOG-mapper	1095737.HMPREF1110_1897	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-0141748_40	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0141748_40	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0141748_43	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0141748_43	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0141748_43	UniRef90	UniRef90_UPI001D06240E	MBL fold metallo-hydrolase	NA
UHGV-0141748_43	eggNOG-mapper	926561.KB900623_gene748	Metallo-beta-lactamase superfamily	NA
UHGV-0141748_43	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0141748_43	dbAPIS	APIS058	NA	NA
UHGV-0141748_43	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0141748_43	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0141748_44	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0141748_44	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0141748_44	UniRef90	UniRef90_UPI0008ECD644	recombinase RecT	NA
UHGV-0141748_44	eggNOG-mapper	666686.B1NLA3E_01105	RecT family	NA
UHGV-0141748_44	Pfam	PF03837	RecT family	RecT
UHGV-0141748_45	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0141748_45	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0141748_45	UniRef90	UniRef90_UPI0008E9D7B2	AAA family ATPase	NA
UHGV-0141748_45	eggNOG-mapper	1444309.JAQG01000013_gene1928	nuclear chromosome segregation	NA
UHGV-0141748_45	Pfam	PF13555	P-loop containing region of AAA domain	AAA_29
UHGV-0141748_45	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0141748_45	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0141748_50	UniRef90	UniRef90_UPI0008E3110F	transcriptional regulator	NA
UHGV-0141748_50	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0141748_50	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0141748_50	Structural annotation	PF01381, PF05339, MF_00535, NF041951, COG3655, COG3093	NA	NA