UHGV-0144190

Genome information

vOTU vOTU-020162

Genome length 24,717 bps

CDS count 37

Completeness 56.09% (medium-quality)

geNomad score 0.9821

Prediction confidence Confident

Genome information
Genome ID	UHGV-0144190
vOTU ID	vOTU-020162
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_415242
BioSample	NA
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.09% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9821
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.55
Jumbo phage	No

Genome content
Genome length	24,717 bps
GC content	55.15%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	37
CDS density	95.99%
Average CDS length	645.81 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0144190_2	PHROG	phrog_23052	NA	unknown function
UHGV-0144190_2	eggNOG-mapper	1235802.C823_01534	NA	NA
UHGV-0144190_2	Structural annotation	PF09931, PF01404, NF033848, NF038128, COG3500	NA	NA
UHGV-0144190_3	PHROG	phrog_1194	NA	unknown function
UHGV-0144190_3	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0144190_4	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0144190_4	eggNOG-mapper	1215915.BN193_09055	phage tail tape measure protein	NA
UHGV-0144190_4	COG	COG5185	Chromosome segregation protein NDC80, interacts with SMC proteins	NA
UHGV-0144190_6	PHROG	phrog_158	major tail protein	tail
UHGV-0144190_6	UniRef90	UniRef90_UPI000B4AA6D0	phage tail protein	NA
UHGV-0144190_6	eggNOG-mapper	1158607.UAU_01767	Phage tail tube protein, TTP	NA
UHGV-0144190_6	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0144190_7	Structural annotation	PF05657	NA	NA
UHGV-0144190_8	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0144190_8	UniRef90	UniRef90_A0A1M5ZM69	Phage protein, HK97 gp10 family	NA
UHGV-0144190_8	eggNOG-mapper	1540257.JQMW01000009_gene3375	NA	NA
UHGV-0144190_8	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0144190_8	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0144190_8	Structural annotation	PF06763, TIGR01725, COG5005	NA	NA
UHGV-0144190_9	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0144190_9	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0144190_10	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0144190_10	UniRef90	UniRef90_A0A175A0L9	Phage gp6-like head-tail connector protein	NA
UHGV-0144190_10	eggNOG-mapper	1499683.CCFF01000014_gene3907	Phage gp6-like head-tail connector protein	NA
UHGV-0144190_10	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0144190_10	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0144190_11	PHROG	phrog_422	major head protein	head and packaging
UHGV-0144190_11	UniRef90	UniRef90_R6RKD0	Gp7	NA
UHGV-0144190_11	eggNOG-mapper	755731.Clo1100_2434	NA	NA
UHGV-0144190_11	Structural annotation	PF19821, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0144190_12	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0144190_12	UniRef90	UniRef90_UPI0016821BB7	NA	NA
UHGV-0144190_12	eggNOG-mapper	1211844.CBLM010000016_gene1492	NA	NA
UHGV-0144190_12	Pfam	PF14265	NA	DUF4355
UHGV-0144190_12	Structural annotation	PF14265	NA	NA
UHGV-0144190_15	PHROG	phrog_2841	minor head protein	head and packaging
UHGV-0144190_15	UniRef90	UniRef90_A0A6I2R8Q3	Phage head morphogenesis protein	NA
UHGV-0144190_15	eggNOG-mapper	742733.HMPREF9469_01825	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0144190_15	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0144190_15	Pfam	PF15644	Papain fold toxin 1, glutamine deamidase	Gln_amidase
UHGV-0144190_15	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0144190_15	COG	COG2369	NA	NA
UHGV-0144190_15	Structural annotation	PF04233, PF21435, TIGR01641	NA	NA
UHGV-0144190_16	PHROG	phrog_64	portal protein	head and packaging
UHGV-0144190_16	UniRef90	UniRef90_UPI00122F6315	phage portal protein	NA
UHGV-0144190_16	eggNOG-mapper	1504823.CCMM01000008_gene1047	Phage portal protein, SPP1 family	NA
UHGV-0144190_16	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0144190_16	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0144190_16	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0144190_17	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0144190_17	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0144190_17	UniRef90	UniRef90_A0A174ZXT9	Phage terminase, large subunit, PBSX family	NA
UHGV-0144190_17	eggNOG-mapper	246194.CHY_1680	Terminase RNAseH like domain	NA
UHGV-0144190_17	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0144190_17	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0144190_17	COG	COG1783	Phage terminase large subunit	NA
UHGV-0144190_17	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0144190_18	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0144190_18	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0144190_18	UniRef90	UniRef90_A0A1H3YVJ7	Phage terminase small subunit	NA
UHGV-0144190_18	eggNOG-mapper	608534.GCWU000341_02298	Terminase small subunit	NA
UHGV-0144190_18	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0144190_18	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0144190_18	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0144190_19	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0144190_19	UniRef90	UniRef90_R5GVZ3	Sigma70_r4 domain-containing protein	NA
UHGV-0144190_19	eggNOG-mapper	203119.Cthe_1732	sigma factor activity	NA
UHGV-0144190_19	Pfam	PF07374	NA	DUF1492
UHGV-0144190_19	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0144190_19	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0144190_21	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0144190_23	PHROG	phrog_874	NA	unknown function
UHGV-0144190_23	eggNOG-mapper	1235793.C809_02214	NA	NA
UHGV-0144190_23	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0144190_25	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0144190_25	PHROG	phrog_2118	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0144190_25	UniRef90	UniRef90_A0A3D4L0Z7	HNH_5 domain-containing protein	NA
UHGV-0144190_25	eggNOG-mapper	1007096.BAGW01000031_gene126	HNH endonuclease	NA
UHGV-0144190_25	Pfam	PF14279	HNH endonuclease	HNH_5
UHGV-0144190_25	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0144190_25	Structural annotation	COG1403	NA	NA
UHGV-0144190_27	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0144190_27	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0144190_27	UniRef90	UniRef90_A0A2V2FY53	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0144190_27	eggNOG-mapper	545697.HMPREF0216_02819	Endodeoxyribonuclease RusA	NA
UHGV-0144190_27	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0144190_27	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0144190_27	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0144190_29	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0144190_29	UniRef90	UniRef90_UPI00195B1341	NA	NA
UHGV-0144190_29	eggNOG-mapper	1196322.A370_04251	NA	NA
UHGV-0144190_29	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0144190_29	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0144190_29	Structural annotation	PF14297, TIGR01714	NA	NA
UHGV-0144190_30	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0144190_30	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0144190_30	UniRef90	UniRef90_R5GS36	Single-stranded DNA-binding protein	NA
UHGV-0144190_30	eggNOG-mapper	411483.FAEPRAA2165_01975	Single-stranded DNA-binding protein	NA
UHGV-0144190_30	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0144190_30	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0144190_30	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0144190_30	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0144190_30	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0144190_32	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0144190_32	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0144190_32	UniRef90	UniRef90_A0A3D1SII0	MBL fold metallo-hydrolase	NA
UHGV-0144190_32	eggNOG-mapper	537013.CLOSTMETH_01716	Metallo-beta-lactamase superfamily	NA
UHGV-0144190_32	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0144190_32	dbAPIS	APIS001	NA	NA
UHGV-0144190_32	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0144190_32	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0144190_33	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0144190_33	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0144190_33	UniRef90	UniRef90_A0A3D1SF45	Recombinase	NA
UHGV-0144190_33	eggNOG-mapper	1118054.CAGW01000106_gene3693	RecT family	NA
UHGV-0144190_33	Pfam	PF03837	RecT family	RecT
UHGV-0144190_33	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0144190_33	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0144190_35	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0144190_35	UniRef90	UniRef90_A0A3D1SGI0	AAA_15 domain-containing protein	NA
UHGV-0144190_35	eggNOG-mapper	1027292.HMPREF9372_3397	nuclear chromosome segregation	NA
UHGV-0144190_35	Pfam	PF13476	AAA domain	AAA_23
UHGV-0144190_35	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0144190_35	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0144190_37	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0144190_37	UniRef90	UniRef90_UPI001643E2CA	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0144190_37	eggNOG-mapper	742740.HMPREF9474_02384	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0144190_37	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0144190_37	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA