UHGV-0144934

Genome information

Genome length 24,973 bps

CDS count 37

Completeness 66.56% (medium-quality)

geNomad score 0.9802

Prediction confidence Confident

Genome information
Genome ID	UHGV-0144934
vOTU ID	vOTU-023013
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_416672
BioSample	SAMN05414929
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	66.56% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9802
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.46
Jumbo phage	No

Genome content
Genome length	24,973 bps
GC content	39.45%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	37
CDS density	94.27%
Average CDS length	638.19 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0144934_1	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0144934_1	PHROG	phrog_2159	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0144934_1	UniRef90	UniRef90_E7GQE5	ParB domain-containing protein	NA
UHGV-0144934_1	eggNOG-mapper	742740.HMPREF9474_03140	ParB-like nuclease domain	NA
UHGV-0144934_1	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0144934_1	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0144934_1	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0144934_2	PHROG	phrog_13845	NA	unknown function
UHGV-0144934_2	eggNOG-mapper	1399942.U3PDR2_9CAUD	NA	NA
UHGV-0144934_2	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0144934_3	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0144934_3	UniRef90	UniRef90_A0A075KJD6	Putative truncated GIY-YIG endonuclease	NA
UHGV-0144934_3	eggNOG-mapper	1399942.U3PCR9_9CAUD	NUMOD3 motif (2 copies)	NA
UHGV-0144934_3	Pfam	PF07460	NUMOD3 motif	NUMOD3
UHGV-0144934_3	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-0144934_3	Structural annotation	PF19835, PF07460, TIGR01453	NA	NA
UHGV-0144934_4	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0144934_4	UniRef90	UniRef90_A0A075KKZ0	Putative terminase large subunit	NA
UHGV-0144934_4	eggNOG-mapper	508419.F8J159_9CAUD	Phage Terminase	NA
UHGV-0144934_4	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0144934_4	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0144934_4	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0144934_5	PHROG	phrog_12	portal protein	head and packaging
UHGV-0144934_5	UniRef90	UniRef90_A0A843HZ12	Phage portal protein	NA
UHGV-0144934_5	eggNOG-mapper	1399942.U3PFW0_9CAUD	Phage portal protein	NA
UHGV-0144934_5	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0144934_5	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0144934_5	Structural annotation	PF04860, PF08184, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0144934_6	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0144934_6	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0144934_6	UniRef90	UniRef90_A0A1Q6M1U6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0144934_6	eggNOG-mapper	536232.CLM_2932	Belongs to the peptidase S14 family	NA
UHGV-0144934_6	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0144934_6	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0144934_6	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0144934_7	PHROG	phrog_10	major head protein	head and packaging
UHGV-0144934_7	UniRef90	UniRef90_A0A168E1E5	Phage capsid family protein	NA
UHGV-0144934_7	eggNOG-mapper	1304866.K413DRAFT_1225	phage major capsid protein, HK97 family	NA
UHGV-0144934_7	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0144934_7	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0144934_7	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0144934_7	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0144934_8	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0144934_8	UniRef90	UniRef90_A0A6P1MNU9	Phage gp6-like head-tail connector protein	NA
UHGV-0144934_8	eggNOG-mapper	1399942.U3PCS3_9CAUD	NA	NA
UHGV-0144934_8	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0144934_8	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0144934_9	PHROG	phrog_25	head closure Hc1	connector
UHGV-0144934_9	UniRef90	UniRef90_A0A843I196	Phage head closure protein	NA
UHGV-0144934_9	eggNOG-mapper	508419.F8J165_9CAUD	Phage head-tail joining protein	NA
UHGV-0144934_9	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0144934_9	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0144934_10	UniRef90	UniRef90_A0A843HUI9	HK97 gp10 family phage protein	NA
UHGV-0144934_10	eggNOG-mapper	508419.F8J166_9CAUD	NA	NA
UHGV-0144934_10	Structural annotation	TIGR01725	NA	NA
UHGV-0144934_11	PHROG	phrog_78	tail terminator	connector
UHGV-0144934_11	UniRef90	UniRef90_UPI0003697F12	NA	NA
UHGV-0144934_11	eggNOG-mapper	1399942.U3PDS3_9CAUD	NA	NA
UHGV-0144934_11	Structural annotation	PF05657	NA	NA
UHGV-0144934_12	PHROG	phrog_88	major tail protein	tail
UHGV-0144934_12	UniRef90	UniRef90_A0A075KJR8	Putative major tail protein	NA
UHGV-0144934_12	eggNOG-mapper	1399942.U3PBH4_9CAUD	NA	NA
UHGV-0144934_12	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0144934_12	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0144934_13	PHROG	phrog_2115	tail protein	tail
UHGV-0144934_13	eggNOG-mapper	508419.F8J169_9CAUD	NA	NA
UHGV-0144934_13	Structural annotation	PF11836	NA	NA
UHGV-0144934_14	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0144934_14	UniRef90	UniRef90_A0A316M686	TMP_3 domain-containing protein	NA
UHGV-0144934_14	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-0144934_14	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0144934_14	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0144934_15	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0144934_15	UniRef90	UniRef90_A0A075KJA3	Putative tail component	NA
UHGV-0144934_15	eggNOG-mapper	1399942.U3PIW9_9CAUD	Phage tail protein	NA
UHGV-0144934_15	Structural annotation	PF05709, TIGR01633, COG4722	NA	NA
UHGV-0144934_16	eggNOG-mapper	1399942.U3PDS7_9CAUD	NA	NA
UHGV-0144934_16	Structural annotation	PF08481, NF032891, COG5456	NA	NA
UHGV-0144934_18	eggNOG-mapper	910314.HMPREF9220_1078	NA	NA
UHGV-0144934_18	Structural annotation	PF08481, NF032891, COG5456	NA	NA
UHGV-0144934_21	Structural annotation	NF033677	NA	NA
UHGV-0144934_22	PHROG	phrog_6465	tail protein	tail
UHGV-0144934_22	UniRef90	UniRef90_A0A2H4JF11	Putative structural protein	NA
UHGV-0144934_22	eggNOG-mapper	1042156.CXIVA_07170	tail collar domain protein	NA
UHGV-0144934_22	COG	COG4675	Phage tail collar domain	NA
UHGV-0144934_22	Structural annotation	COG4675	NA	NA
UHGV-0144934_23	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0144934_23	UniRef90	UniRef90_A0A2P1CCB3	Prophage_tail domain-containing protein	NA
UHGV-0144934_23	eggNOG-mapper	1399942.U3PFX4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0144934_23	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0144934_23	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0144934_23	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0144934_24	PHROG	phrog_372	tail protein	tail
UHGV-0144934_24	UniRef90	UniRef90_A0A4D6B7C6	Capsid and scaffold protein	NA
UHGV-0144934_24	eggNOG-mapper	1123315.AUIP01000001_gene1436	NA	NA
UHGV-0144934_24	Pfam	PF05895	NA	DUF859
UHGV-0144934_24	Structural annotation	PF05895, MF_04116, NF010681, COG3401	NA	NA
UHGV-0144934_25	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0144934_25	PHROG	phrog_95	integrase	integration and excision
UHGV-0144934_25	UniRef90	UniRef90_UPI0007748959	recombinase family protein	NA
UHGV-0144934_25	eggNOG-mapper	1235799.C818_04182	Resolvase, N terminal domain	NA
UHGV-0144934_25	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0144934_25	Pfam	PF07508	Recombinase	Recombinase
UHGV-0144934_25	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0144934_25	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0144934_25	Structural annotation	PF07508, PF00239, PF18822, NF041201, COG1961	NA	NA
UHGV-0144934_26	KOfam	K14056	puuR; HTH-type transcriptional regulator, repressor for puuD	NA
UHGV-0144934_26	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0144934_26	UniRef90	UniRef90_R6AML4	XRE family transcriptional regulator	NA
UHGV-0144934_26	eggNOG-mapper	224719.Abm4_1037	IrrE N-terminal-like domain	NA
UHGV-0144934_26	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0144934_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0144934_26	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0144934_26	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0144934_27	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0144934_27	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0144934_27	UniRef90	UniRef90_UPI0012FEF88D	helix-turn-helix domain-containing protein	NA
UHGV-0144934_27	eggNOG-mapper	1121422.AUMW01000018_gene1866	Helix-turn-helix XRE-family like proteins	NA
UHGV-0144934_27	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0144934_27	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0144934_27	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0144934_27	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0144934_29	PHROG	phrog_2324	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0144934_29	UniRef90	UniRef90_A0A366DNY1	ERF superfamily protein	NA
UHGV-0144934_29	eggNOG-mapper	508419.F8J181_9CAUD	NA	NA
UHGV-0144934_29	Pfam	PF04404	ERF superfamily	ERF
UHGV-0144934_29	Structural annotation	PF04404	NA	NA
UHGV-0144934_30	Structural annotation	PF19157	NA	NA
UHGV-0144934_31	PHROG	phrog_6244	NA	unknown function
UHGV-0144934_31	eggNOG-mapper	508419.F8J183_9CAUD	NA	NA
UHGV-0144934_31	Structural annotation	PF05565	NA	NA
UHGV-0144934_32	PHROG	phrog_298	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0144934_32	UniRef90	UniRef90_A0A843HPP6	PD-(D/E)XK nuclease family protein	NA
UHGV-0144934_32	eggNOG-mapper	1399942.U3PDT7_9CAUD	nuclease activity	NA
UHGV-0144934_32	Structural annotation	PF12705, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-0144934_33	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0144934_33	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0144934_33	UniRef90	UniRef90_A0A373HW21	Single-stranded DNA-binding protein	NA
UHGV-0144934_33	eggNOG-mapper	1410674.JNKU01000010_gene1752	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0144934_33	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0144934_33	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0144934_33	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0144934_33	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0144934_33	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0144934_34	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0144934_34	eggNOG-mapper	1304866.K413DRAFT_1197	NA	NA
UHGV-0144934_34	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0144934_35	PHROG	phrog_7566	NA	unknown function
UHGV-0144934_35	UniRef90	UniRef90_A0A7X5CEC2	Phosphoenolpyruvate carboxykinase	NA
UHGV-0144934_35	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-0144934_36	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0144934_36	UniRef90	UniRef90_A0A7C9LJY9	NA	NA
UHGV-0144934_36	eggNOG-mapper	525255.HMPREF0077_0413	NA	NA
UHGV-0144934_36	Pfam	PF06356	NA	DUF1064
UHGV-0144934_36	Structural annotation	PF06356, MF_00130, NF033179	NA	NA
UHGV-0144934_37	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0144934_37	UniRef90	UniRef90_A0A091CDS7	Phg_2220_C domain-containing protein	NA
UHGV-0144934_37	eggNOG-mapper	242527.Q6V7R6_9CAUD	calcium ion binding	NA
UHGV-0144934_37	Pfam	PF13730	Helix-turn-helix domain	HTH_36