UHGV-0146365

Genome information

vOTU vOTU-020027

Genome length 36,470 bps

CDS count 59

Completeness 85.05% (medium-quality)

geNomad score 0.9787

Prediction confidence Confident

Genome information
Genome ID	UHGV-0146365
vOTU ID	vOTU-020027
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_395026
BioSample	SAMN04436728
Country	United States
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.05% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	30
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9787
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	67.43
Jumbo phage	No

Genome content
Genome length	36,470 bps
GC content	51.55%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	59
CDS density	90.02%
Average CDS length	559.48 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0146365_1	PHROG	phrog_11303	tail fiber protein	tail
UHGV-0146365_1	UniRef90	UniRef90_A0A084ZHR6	Pin family phage protein (Fragment)	NA
UHGV-0146365_1	eggNOG-mapper	1005994.GTGU_01449	tail collar domain protein	NA
UHGV-0146365_1	COG	COG4675	Phage tail collar domain	NA
UHGV-0146365_2	PHROG	phrog_587	structural protein	head and packaging
UHGV-0146365_2	UniRef90	UniRef90_A0A7S8ZN09	NA	NA
UHGV-0146365_2	eggNOG-mapper	741091.Rahaq_5014	NA	NA
UHGV-0146365_2	Pfam	PF11041	NA	DUF2612
UHGV-0146365_2	Structural annotation	PF11041, TIGR02242, COG3948	NA	NA
UHGV-0146365_3	PHROG	phrog_6	baseplate protein	tail
UHGV-0146365_3	UniRef90	UniRef90_E6BDH9	Baseplate_J domain-containing protein	NA
UHGV-0146365_3	eggNOG-mapper	220341.16503056	Baseplate J-like protein	NA
UHGV-0146365_3	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0146365_3	COG	COG3299	NA	NA
UHGV-0146365_3	Structural annotation	PF03434, PF21379, PF21110, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0146365_4	PHROG	phrog_120	baseplate protein	tail
UHGV-0146365_4	UniRef90	UniRef90_A0A8G2A2B4	Bacteriophage protein	NA
UHGV-0146365_4	eggNOG-mapper	1076550.LH22_17125	NA	NA
UHGV-0146365_4	Structural annotation	PF04965, TIGR03357, COG3628	NA	NA
UHGV-0146365_5	UniRef90	UniRef90_A0A6L7EK37	Gp138_N domain-containing protein	NA
UHGV-0146365_5	eggNOG-mapper	1115515.EV102420_43_00040	Baseplate assembly protein	NA
UHGV-0146365_5	Pfam	PF18352	NA	Gp138_N
UHGV-0146365_5	Pfam	PF18946	GpV Apex motif	Apex
UHGV-0146365_5	COG	COG4540	Phage P2 baseplate assembly protein gpV	NA
UHGV-0146365_5	Structural annotation	PF18352, TIGR01644, COG4384	NA	NA
UHGV-0146365_6	PHROG	phrog_129	transcriptional regulator	transcription regulation
UHGV-0146365_6	UniRef90	UniRef90_A0A2J4QCB3	KilA-N domain-containing protein	NA
UHGV-0146365_6	eggNOG-mapper	1286170.RORB6_10075	KilA-N	NA
UHGV-0146365_6	Pfam	PF04383	KilA-N domain	KilA-N
UHGV-0146365_6	Structural annotation	PF04383	NA	NA
UHGV-0146365_8	PHROG	phrog_3443	NA	unknown function
UHGV-0146365_8	eggNOG-mapper	220341.16503062	NA	NA
UHGV-0146365_9	PHROG	phrog_196	virion structural protein	head and packaging
UHGV-0146365_9	UniRef90	UniRef90_F4T249	Putative bacteriophage protein	NA
UHGV-0146365_9	eggNOG-mapper	220341.16503063	NA	NA
UHGV-0146365_9	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0146365_10	PHROG	phrog_349	virion structural protein	head and packaging
UHGV-0146365_10	UniRef90	UniRef90_A0A1V7I2G1	Bacteriophage protein	NA
UHGV-0146365_10	eggNOG-mapper	741091.Rahaq_5007	NA	NA
UHGV-0146365_11	PHROG	phrog_817	tail fiber protein	tail
UHGV-0146365_11	UniRef90	UniRef90_A0A1V8B6F4	Bacteriophage protein	NA
UHGV-0146365_11	eggNOG-mapper	104623.Ser39006_04150	NA	NA
UHGV-0146365_11	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-0146365_11	Structural annotation	PF21821, TIGR01633, COG3499	NA	NA
UHGV-0146365_12	KOfam	K08307	mltD, dniR; membrane-bound lytic murein transglycosylase D [EC:4.2.2.-]	NA
UHGV-0146365_12	PHROG	phrog_2276	tail length tape measure protein	tail
UHGV-0146365_12	UniRef90	UniRef90_A0A4P0U6P1	Lytic transglycosylase, catalytic	NA
UHGV-0146365_12	eggNOG-mapper	741091.Rahaq_5005	Belongs to the WXG100 family	NA
UHGV-0146365_12	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0146365_12	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0146365_12	Structural annotation	PF01464, PF10145, MF_01381, NF008050, TIGR01760, COG0741	NA	NA
UHGV-0146365_13	PHROG	phrog_4364	NA	unknown function
UHGV-0146365_13	UniRef90	UniRef90_A0A2J1DGY6	NTP pyrophosphohydrolase	NA
UHGV-0146365_13	eggNOG-mapper	1410619.SRDD_41880	NA	NA
UHGV-0146365_14	PHROG	phrog_1688	tail assembly chaperone	tail
UHGV-0146365_14	UniRef90	UniRef90_A0A210V7Y8	Bacteriophage protein	NA
UHGV-0146365_14	eggNOG-mapper	220341.16503067	NA	NA
UHGV-0146365_14	Pfam	PF21822	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
UHGV-0146365_14	Structural annotation	PF21822	NA	NA
UHGV-0146365_15	PHROG	phrog_280	virion structural protein	head and packaging
UHGV-0146365_15	UniRef90	UniRef90_A0A377TME0	Bacteriophage protein	NA
UHGV-0146365_15	eggNOG-mapper	741091.Rahaq_5003	NA	NA
UHGV-0146365_15	Pfam	PF11681	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
UHGV-0146365_15	Structural annotation	PF11681, TIGR02126, COG5437	NA	NA
UHGV-0146365_16	PHROG	phrog_1035	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-0146365_16	UniRef90	UniRef90_A0A2L2DMB8	Intron encoded nuclease	NA
UHGV-0146365_16	eggNOG-mapper	1636271.A0A0E3JPC0_9CAUD	NA	NA
UHGV-0146365_17	PHROG	phrog_205	virion structural protein	head and packaging
UHGV-0146365_17	UniRef90	UniRef90_J5XU54	PF11863 domain protein	NA
UHGV-0146365_17	eggNOG-mapper	104623.Ser39006_04154	NA	NA
UHGV-0146365_17	Pfam	PF11863	NA	DUF3383
UHGV-0146365_17	Structural annotation	PF11863, COG3497	NA	NA
UHGV-0146365_18	PHROG	phrog_1973	NA	unknown function
UHGV-0146365_18	UniRef90	UniRef90_A0A085ADH0	Putative bacteriophage protein	NA
UHGV-0146365_18	eggNOG-mapper	104623.Ser39006_04155	NA	NA
UHGV-0146365_18	Structural annotation	PF09646	NA	NA
UHGV-0146365_19	PHROG	phrog_939	head protein	head and packaging
UHGV-0146365_19	UniRef90	UniRef90_A0A157TQ91	Head-tail adaptor	NA
UHGV-0146365_19	eggNOG-mapper	1005994.GTGU_01462	NA	NA
UHGV-0146365_19	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0146365_20	PHROG	phrog_222	tail protein	tail
UHGV-0146365_20	UniRef90	UniRef90_A0A8G2E5P6	NA	NA
UHGV-0146365_20	eggNOG-mapper	1005994.GTGU_01774	NA	NA
UHGV-0146365_21	PHROG	phrog_302	virion structural protein	head and packaging
UHGV-0146365_21	UniRef90	UniRef90_A0A2J1DGX9	NA	NA
UHGV-0146365_21	eggNOG-mapper	1524467.IV04_12500	NA	NA
UHGV-0146365_21	Pfam	PF13262	NA	DUF4054
UHGV-0146365_21	Structural annotation	PF13262	NA	NA
UHGV-0146365_22	PHROG	phrog_2619	NA	unknown function
UHGV-0146365_22	UniRef90	UniRef90_UPI001F0E6396	NA	NA
UHGV-0146365_22	eggNOG-mapper	104623.Ser39006_04159	NA	NA
UHGV-0146365_23	PHROG	phrog_264	major head protein	head and packaging
UHGV-0146365_23	UniRef90	UniRef90_A0A0H3GSC1	Putative bacteriophage protein	NA
UHGV-0146365_23	eggNOG-mapper	104623.Ser39006_04160	NA	NA
UHGV-0146365_23	Pfam	PF09950	NA	DUF2184
UHGV-0146365_23	COG	COG4834	NA	NA
UHGV-0146365_23	Structural annotation	PF09950, MF_04113, TIGR01554, COG4834	NA	NA
UHGV-0146365_24	PHROG	phrog_563	virion structural protein	head and packaging
UHGV-0146365_24	UniRef90	UniRef90_A0A087L192	Bacteriophage protein	NA
UHGV-0146365_24	eggNOG-mapper	104623.Ser39006_04161	NA	NA
UHGV-0146365_24	Structural annotation	PF09956, COG5471	NA	NA
UHGV-0146365_25	KOfam	K09960	NA	NA
UHGV-0146365_25	PHROG	phrog_1961	NA	unknown function
UHGV-0146365_25	UniRef90	UniRef90_UPI000C7E7217	NA	NA
UHGV-0146365_25	eggNOG-mapper	104623.Ser39006_04162	NA	NA
UHGV-0146365_25	Pfam	PF09979	NA	DUF2213
UHGV-0146365_25	COG	COG3566	NA	NA
UHGV-0146365_25	Structural annotation	PF09979, TIGR01543, COG3566	NA	NA
UHGV-0146365_26	PHROG	phrog_324	head morphogenesis	head and packaging
UHGV-0146365_26	UniRef90	UniRef90_A0A8D6JBJ4	Bacteriophage protein	NA
UHGV-0146365_26	eggNOG-mapper	104623.Ser39006_04163	Phage Mu protein F like protein	NA
UHGV-0146365_26	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0146365_26	COG	COG2369	NA	NA
UHGV-0146365_26	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0146365_27	KOfam	K09961	NA	NA
UHGV-0146365_27	PHROG	phrog_146	portal protein	head and packaging
UHGV-0146365_27	UniRef90	UniRef90_A0A2U0MRA7	NA	NA
UHGV-0146365_27	eggNOG-mapper	104623.Ser39006_04164	NA	NA
UHGV-0146365_27	Pfam	PF06381	Anti-CBASS protein Acb1-like	Abc1-like
UHGV-0146365_27	NCBIFam	TIGR01555.1	phage-associated protein, HI1409 family	NA
UHGV-0146365_27	COG	COG3567	NA	NA
UHGV-0146365_27	Structural annotation	PF06381, MF_04135, TIGR01555, COG3567	NA	NA
UHGV-0146365_28	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0146365_28	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0146365_28	UniRef90	UniRef90_A0A0E1CF92	Terminase large subunit	NA
UHGV-0146365_28	eggNOG-mapper	220341.16503080	Phage terminase large subunit	NA
UHGV-0146365_28	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0146365_28	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0146365_28	COG	COG1783	Phage terminase large subunit	NA
UHGV-0146365_28	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0146365_29	PHROG	phrog_370	terminase small subunit	head and packaging
UHGV-0146365_29	UniRef90	UniRef90_A0A0E1CK32	Phage Terminase Small Subunit	NA
UHGV-0146365_29	eggNOG-mapper	198214.SF0675	NA	NA
UHGV-0146365_29	Structural annotation	PF19824, MF_01506, NF041271, COG1579	NA	NA
UHGV-0146365_30	PHROG	phrog_162	endolysin	lysis
UHGV-0146365_30	UniRef90	UniRef90_UPI001E3F9BAC	DNZ54_00345 family protein	NA
UHGV-0146365_30	Structural annotation	NF038378	NA	NA
UHGV-0146365_31	PHROG	phrog_214	Rz-like spanin	lysis
UHGV-0146365_31	UniRef90	UniRef90_A0A5D3JAQ0	NA	NA
UHGV-0146365_31	eggNOG-mapper	571.MC52_23615	NA	NA
UHGV-0146365_32	KOfam	K01185	E3.2.1.17; lysozyme [EC:3.2.1.17]	NA
UHGV-0146365_32	PHROG	phrog_7	endolysin	lysis
UHGV-0146365_32	UniRef90	UniRef90_A0A564JWS7	Lysozyme	NA
UHGV-0146365_32	eggNOG-mapper	399742.Ent638_0795	lysozyme	NA
UHGV-0146365_32	Pfam	PF00959	Phage lysozyme	Phage_lysozyme
UHGV-0146365_32	COG	COG3772	Phage-related lysozyme (muramidase), GH24 family	NA
UHGV-0146365_32	HAMAP	MF_04110	Endolysin	NA
UHGV-0146365_32	Structural annotation	PF00959, MF_04110, COG3772	NA	NA
UHGV-0146365_33	PHROG	phrog_1350	holin	lysis
UHGV-0146365_33	eggNOG-mapper	1443113.LC20_03275	NA	NA
UHGV-0146365_34	PHROG	phrog_753	anti-termination protein Q-like	transcription regulation
UHGV-0146365_34	UniRef90	UniRef90_UPI0005E17057	NA	NA
UHGV-0146365_34	eggNOG-mapper	90371.CY43_13955	NA	NA
UHGV-0146365_34	Pfam	PF06576	NA	DUF1133
UHGV-0146365_34	Structural annotation	PF06576	NA	NA
UHGV-0146365_35	PHROG	phrog_33262	NA	unknown function
UHGV-0146365_35	UniRef90	UniRef90_A0A483JPI8	Phage N-6-adenine-methyltransferase	NA
UHGV-0146365_35	eggNOG-mapper	1080067.BAZH01000027_gene3201	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-0146365_35	PADLOC	MTase_II_00118	Type II methyltransferase	RM
UHGV-0146365_35	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0146365_35	NCBIFam	TIGR01712.1	phage N-6-adenine-methyltransferase	NA
UHGV-0146365_35	COG	COG4725	N6-adenosine-specific RNA methylase IME4	NA
UHGV-0146365_35	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0146365_36	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0146365_36	UniRef90	UniRef90_A0A208MX97	Dcm methylase	NA
UHGV-0146365_36	eggNOG-mapper	1205683.CAKR01000025_gene3612	NA	NA
UHGV-0146365_36	Structural annotation	PF01728, MF_01547, NF008390, COG0293	NA	NA
UHGV-0146365_37	PHROG	phrog_171	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0146365_37	UniRef90	UniRef90_UPI000E07F9D9	recombination protein NinG	NA
UHGV-0146365_37	eggNOG-mapper	35703.DQ02_12500	Bacteriophage Lambda NinG protein	NA
UHGV-0146365_37	Pfam	PF05766	Bacteriophage Lambda NinG protein	NinG
UHGV-0146365_37	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0146365_37	Structural annotation	PF05766	NA	NA
UHGV-0146365_38	PHROG	phrog_4595	NA	unknown function
UHGV-0146365_38	eggNOG-mapper	220341.16502183	NA	NA
UHGV-0146365_38	Structural annotation	PF20090, NF041544	NA	NA
UHGV-0146365_39	PHROG	phrog_12449	NA	unknown function
UHGV-0146365_39	UniRef90	UniRef90_UPI001E424120	NA	NA
UHGV-0146365_39	eggNOG-mapper	1005994.GTGU_01484	NA	NA
UHGV-0146365_40	PHROG	phrog_14672	NA	unknown function
UHGV-0146365_41	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0146365_41	PHROG	phrog_25613	NA	unknown function
UHGV-0146365_41	UniRef90	UniRef90_A0A422ZHS6	HTH_ParB domain-containing protein	NA
UHGV-0146365_41	eggNOG-mapper	573.JG24_10860	NA	NA
UHGV-0146365_41	Pfam	PF17762	HTH domain found in ParB protein	HTH_ParB
UHGV-0146365_41	Structural annotation	PF02195, PF08535, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-0146365_42	Structural annotation	PF14354, TIGR04203	NA	NA
UHGV-0146365_43	UniRef90	UniRef90_A0A483KTM8	Transcriptional regulator	NA
UHGV-0146365_44	PHROG	phrog_9773	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0146365_44	UniRef90	UniRef90_A0A8G2A0F6	Replication protein O	NA
UHGV-0146365_44	eggNOG-mapper	573.JG24_10845	NA	NA
UHGV-0146365_44	Structural annotation	PF03882, NF041413, COG1675	NA	NA
UHGV-0146365_45	UniRef90	UniRef90_UPI0013F43FFA	NA	NA
UHGV-0146365_45	Structural annotation	PF13973, MF_00749, NF037951, COG4481	NA	NA
UHGV-0146365_46	PHROG	phrog_163	CII-like transcriptional activator	transcription regulation
UHGV-0146365_46	UniRef90	UniRef90_A0A1V3Z5E0	YdaT_toxin domain-containing protein	NA
UHGV-0146365_46	eggNOG-mapper	754331.AEME01000001_gene1842	Putative bacterial toxin ydaT	NA
UHGV-0146365_46	Pfam	PF06254	Bacterial toxin ydaT	YdaT_toxin
UHGV-0146365_46	Structural annotation	PF06254	NA	NA
UHGV-0146365_47	PHROG	phrog_35	transcriptional repressor	transcription regulation
UHGV-0146365_47	UniRef90	UniRef90_A0A8E3W6C2	Transcriptional regulator	NA
UHGV-0146365_47	eggNOG-mapper	155864.EDL933_1251	Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA
UHGV-0146365_47	Pfam	PF15943	Bacterial toxin YdaS	YdaS_toxin
UHGV-0146365_47	COG	COG4197	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily	NA
UHGV-0146365_47	Structural annotation	PF15943, NF007257, COG4197	NA	NA
UHGV-0146365_48	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0146365_48	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0146365_48	UniRef90	UniRef90_A0A1V2BKD7	XRE family transcriptional regulator	NA
UHGV-0146365_48	eggNOG-mapper	155864.EDL933_1250	sequence-specific DNA binding	NA
UHGV-0146365_48	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0146365_48	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0146365_48	Structural annotation	PF01381, MF_00535, NF007257, COG1396	NA	NA
UHGV-0146365_50	PHROG	phrog_34525	NA	unknown function
UHGV-0146365_50	eggNOG-mapper	1524467.IV04_11820	NA	NA
UHGV-0146365_51	KOfam	K01675	fumD; fumarate hydratase D [EC:4.2.1.2]	NA
UHGV-0146365_51	PHROG	phrog_5948	NA	unknown function
UHGV-0146365_51	UniRef90	UniRef90_A0A8E6ZNZ3	Fumarase D	NA
UHGV-0146365_51	eggNOG-mapper	1524467.IV04_11825	NA	NA
UHGV-0146365_51	Pfam	PF10965	NA	DUF2767
UHGV-0146365_51	NCBIFam	NF007630.0	fumarate hydratase FumD	NA
UHGV-0146365_51	Structural annotation	PF10965, NF007630	NA	NA
UHGV-0146365_52	PHROG	phrog_23495	NA	unknown function
UHGV-0146365_54	UniRef90	UniRef90_A0A898GG39	Host cell division inhibitory peptide Kil	NA
UHGV-0146365_54	Structural annotation	PF06301	NA	NA
UHGV-0146365_56	PHROG	phrog_1001	NA	unknown function
UHGV-0146365_56	eggNOG-mapper	573.JG24_10795	NA	NA
UHGV-0146365_56	Structural annotation	PF00936, MF_00854, NF012018, COG4577	NA	NA
UHGV-0146365_57	PHROG	phrog_6675	NA	unknown function
UHGV-0146365_57	eggNOG-mapper	573.JG24_10790	NA	NA
UHGV-0146365_58	PHROG	phrog_539	excisionase	integration and excision
UHGV-0146365_58	UniRef90	UniRef90_A0A2I8WIP4	Excisionase family protein	NA
UHGV-0146365_58	eggNOG-mapper	1115515.EV102420_23_00190	NA	NA
UHGV-0146365_58	Pfam	PF06806	NA	DUF1233
UHGV-0146365_58	Structural annotation	PF06806	NA	NA
UHGV-0146365_59	KOfam	K14059	int; integrase	NA
UHGV-0146365_59	PHROG	phrog_1	integrase	integration and excision
UHGV-0146365_59	UniRef90	UniRef90_A0A5Q9LHF8	Transporter	NA
UHGV-0146365_59	eggNOG-mapper	1045856.EcWSU1_02349	Phage integrase family	NA
UHGV-0146365_59	Pfam	PF12167	Arm DNA-binding domain	Arm-DNA-bind_2
UHGV-0146365_59	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0146365_59	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0146365_59	Structural annotation	PF00589, PF12167, PF14659, MF_01808, TIGR02224, COG4974	NA	NA