UHGV-0146586

Genome information

Genome length 42,880 bps

CDS count 74

Completeness 97.41% (high-quality)

geNomad score 0.9817

Prediction confidence Confident

Genome information
Genome ID	UHGV-0146586
vOTU ID	vOTU-064316
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_407567
BioSample	NA
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.41% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9817
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	68.86
Jumbo phage	No

Genome content
Genome length	42,880 bps
GC content	51.70%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	74
CDS density	92.05%
Average CDS length	538.87 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0146586_2	PHROG	phrog_37750	NA	unknown function
UHGV-0146586_2	UniRef90	UniRef90_UPI001D06EB78	NA	NA
UHGV-0146586_2	eggNOG-mapper	1087481.AGFX01000037_gene4346	NA	NA
UHGV-0146586_4	KOfam	K14623	dinD; DNA-damage-inducible protein D	NA
UHGV-0146586_4	PHROG	phrog_15286	NA	unknown function
UHGV-0146586_4	UniRef90	UniRef90_A0A1C5N3L4	Bro-N domain-containing protein	NA
UHGV-0146586_4	eggNOG-mapper	1195236.CTER_1513	BRO family, N-terminal domain	NA
UHGV-0146586_4	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0146586_4	COG	COG3617	Prophage antirepressor	NA
UHGV-0146586_4	Structural annotation	PF09669, NF008573, COG3617	NA	NA
UHGV-0146586_5	KOfam	K14059	int; integrase	NA
UHGV-0146586_5	PHROG	phrog_1	integrase	integration and excision
UHGV-0146586_5	UniRef90	UniRef90_A0A1C5N3H1	Integrase	NA
UHGV-0146586_5	eggNOG-mapper	1321814.HMPREF9089_00905	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0146586_5	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0146586_5	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0146586_5	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0146586_5	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0146586_6	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0146586_7	eggNOG-mapper	1408437.JNJN01000043_gene802	NA	NA
UHGV-0146586_9	PHROG	phrog_16490	NA	unknown function
UHGV-0146586_9	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0146586_11	eggNOG-mapper	445972.ANACOL_01878	NA	NA
UHGV-0146586_13	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0146586_14	PHROG	phrog_21357	endolysin	lysis
UHGV-0146586_14	UniRef90	UniRef90_UPI00067EF636	CHAP domain-containing protein	NA
UHGV-0146586_14	eggNOG-mapper	1378168.N510_02471	NLP P60 protein	NA
UHGV-0146586_14	Pfam	PF05257	CHAP domain	CHAP
UHGV-0146586_14	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0146586_14	Structural annotation	PF00877, TIGR02594, COG0791	NA	NA
UHGV-0146586_15	PHROG	phrog_13256	NA	unknown function
UHGV-0146586_15	eggNOG-mapper	1226322.HMPREF1545_00607	NA	NA
UHGV-0146586_16	UniRef90	UniRef90_A0A845RAD8	LapA family protein	NA
UHGV-0146586_16	eggNOG-mapper	1203606.HMPREF1526_00254	NA	NA
UHGV-0146586_17	PHROG	phrog_4105	NA	unknown function
UHGV-0146586_18	UniRef90	UniRef90_R6I1X1	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	NA
UHGV-0146586_18	eggNOG-mapper	552398.HMPREF0866_01159	NA	NA
UHGV-0146586_20	PHROG	phrog_5302	tail protein	tail
UHGV-0146586_20	UniRef90	UniRef90_R6M197	Ig-like_bact domain-containing protein	NA
UHGV-0146586_20	eggNOG-mapper	1203606.HMPREF1526_00261	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0146586_20	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0146586_20	Structural annotation	PF02368, MF_04116, NF010681, COG1262, COG1361	NA	NA
UHGV-0146586_21	KOfam	K19721	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	NA
UHGV-0146586_21	PHROG	phrog_819	tail protein	tail
UHGV-0146586_21	eggNOG-mapper	1203606.HMPREF1526_02029	Collagen triple helix repeat (20 copies)	NA
UHGV-0146586_21	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0146586_21	COG	COG1409	3',5'-cyclic AMP phosphodiesterase CpdA	NA
UHGV-0146586_23	PHROG	phrog_32744	NA	unknown function
UHGV-0146586_23	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-0146586_23	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-0146586_24	PHROG	phrog_1194	NA	unknown function
UHGV-0146586_24	eggNOG-mapper	1226322.HMPREF1545_00060	NA	NA
UHGV-0146586_24	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0146586_25	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0146586_25	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-0146586_25	COG	COG1511	NA	NA
UHGV-0146586_25	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0146586_26	PHROG	phrog_8545	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UHGV-0146586_26	Pfam	PF12869	tRNA_anti-like	tRNA_anti-like
UHGV-0146586_27	PHROG	phrog_706	NA	unknown function
UHGV-0146586_27	UniRef90	UniRef90_UPI001D069FB9	Gp15 family bacteriophage protein	NA
UHGV-0146586_27	eggNOG-mapper	1235797.C816_04184	Bacteriophage Gp15 protein	NA
UHGV-0146586_27	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0146586_27	Structural annotation	PF06854	NA	NA
UHGV-0146586_28	PHROG	phrog_11299	NA	unknown function
UHGV-0146586_28	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0146586_28	Structural annotation	PF10666	NA	NA
UHGV-0146586_29	PHROG	phrog_3099	NA	unknown function
UHGV-0146586_29	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-0146586_29	Structural annotation	PF10772, TIGR02126, COG3499	NA	NA
UHGV-0146586_30	PHROG	phrog_3266	tail completion	connector
UHGV-0146586_30	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0146586_30	Structural annotation	PF12691	NA	NA
UHGV-0146586_31	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0146586_31	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0146586_31	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0146586_31	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0146586_31	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0146586_32	PHROG	phrog_3366	NA	unknown function
UHGV-0146586_32	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0146586_32	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0146586_33	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0146586_33	UniRef90	UniRef90_A0A371AQT0	NA	NA
UHGV-0146586_33	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0146586_34	UniRef90	UniRef90_A0A8J6J3F8	Cadherin-like beta sandwich domain-containing protein	NA
UHGV-0146586_34	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0146586_35	PHROG	phrog_10	major head protein	head and packaging
UHGV-0146586_35	UniRef90	UniRef90_U2SBS0	Phage capsid family protein	NA
UHGV-0146586_35	eggNOG-mapper	1226322.HMPREF1545_00050	Phage capsid family	NA
UHGV-0146586_35	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0146586_35	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0146586_35	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0146586_35	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0146586_36	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0146586_36	eggNOG-mapper	1226322.HMPREF1545_00049	NA	NA
UHGV-0146586_36	AcrCatalog	cluster_74817	NA	NA
UHGV-0146586_37	Structural annotation	PF11607, MF_00436, NF011232, COG1923	NA	NA
UHGV-0146586_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0146586_38	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0146586_38	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0146586_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0146586_38	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0146586_38	COG	COG2369	NA	NA
UHGV-0146586_38	Structural annotation	PF06152, PF15542, TIGR01641, COG2369	NA	NA
UHGV-0146586_39	PHROG	phrog_533	portal protein	head and packaging
UHGV-0146586_39	UniRef90	UniRef90_U2R2D2	Putative phage minor capsid protein	NA
UHGV-0146586_39	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0146586_39	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0146586_39	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0146586_40	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0146586_40	PHROG	phrog_5653	terminase large subunit	head and packaging
UHGV-0146586_40	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-0146586_40	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0146586_40	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0146586_40	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0146586_40	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0146586_40	COG	COG1783	Phage terminase large subunit	NA
UHGV-0146586_40	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0146586_41	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0146586_41	UniRef90	UniRef90_A0A8J6MDX5	Helix-turn-helix domain-containing protein	NA
UHGV-0146586_41	eggNOG-mapper	693746.OBV_18020	transposase activity	NA
UHGV-0146586_41	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0146586_41	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0146586_41	Structural annotation	PF07141	NA	NA
UHGV-0146586_43	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0146586_43	UniRef90	UniRef90_A0A645G8B4	HTH cro/C1-type domain-containing protein	NA
UHGV-0146586_43	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0146586_43	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0146586_43	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0146586_44	UniRef90	UniRef90_A0A1H1GVZ7	NA	NA
UHGV-0146586_47	PHROG	phrog_25385	NA	unknown function
UHGV-0146586_47	eggNOG-mapper	411468.CLOSCI_00565	NA	NA
UHGV-0146586_48	PHROG	phrog_1689	nucleotide kinase	other
UHGV-0146586_48	UniRef90	UniRef90_UPI0013022309	NA	NA
UHGV-0146586_48	eggNOG-mapper	1125712.HMPREF1316_2379	NA	NA
UHGV-0146586_48	Pfam	PF11753	NA	DUF3310
UHGV-0146586_50	PHROG	phrog_22543	NA	unknown function
UHGV-0146586_52	PHROG	phrog_38832	NA	unknown function
UHGV-0146586_52	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0146586_55	PHROG	phrog_25732	NA	unknown function
UHGV-0146586_56	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0146586_56	UniRef90	UniRef90_UPI0013141DAE	NUMOD4 domain-containing protein	NA
UHGV-0146586_56	eggNOG-mapper	749413.E5DV63_9VIRU	HNH endonuclease	NA
UHGV-0146586_56	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0146586_56	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0146586_56	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0146586_56	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-0146586_59	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-0146586_60	PHROG	phrog_3292	NA	unknown function
UHGV-0146586_60	UniRef90	UniRef90_A0A1V0QCT8	KTSC domain-containing protein	NA
UHGV-0146586_60	eggNOG-mapper	748727.CLJU_c31420	KTSC domain	NA
UHGV-0146586_60	Pfam	PF13619	KTSC domain	KTSC
UHGV-0146586_60	COG	COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	NA
UHGV-0146586_60	Structural annotation	PF13619	NA	NA
UHGV-0146586_61	PHROG	phrog_5765	NA	unknown function
UHGV-0146586_61	UniRef90	UniRef90_UPI00115D67B4	BC1881 family protein	NA
UHGV-0146586_61	eggNOG-mapper	1095750.HMPREF9970_1008	NA	NA
UHGV-0146586_61	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-0146586_62	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0146586_62	UniRef90	UniRef90_UPI0018AC14ED	Lar family restriction alleviation protein	NA
UHGV-0146586_62	eggNOG-mapper	742738.HMPREF9460_04054	Restriction alleviation protein Lar	NA
UHGV-0146586_62	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0146586_62	Structural annotation	PF14354, NF007260	NA	NA
UHGV-0146586_63	Structural annotation	PF20987	NA	NA
UHGV-0146586_64	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0146586_64	UniRef90	UniRef90_A0A7X8IB41	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0146586_64	eggNOG-mapper	469604.HMPREF0946_00819	NA	NA
UHGV-0146586_64	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0146586_65	PHROG	phrog_9804	NA	unknown function
UHGV-0146586_65	UniRef90	UniRef90_UPI0018976F94	replicative helicase loader/inhibitor	NA
UHGV-0146586_65	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0146586_65	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0146586_65	Structural annotation	PF11417	NA	NA
UHGV-0146586_66	PHROG	phrog_16304	NA	unknown function
UHGV-0146586_66	UniRef90	UniRef90_UPI001E560709	NA	NA
UHGV-0146586_66	eggNOG-mapper	1035196.HMPREF9998_01752	NA	NA
UHGV-0146586_66	Pfam	PF19808	NA	DUF6291
UHGV-0146586_66	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0146586_66	Structural annotation	PF19808	NA	NA
UHGV-0146586_67	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0146586_67	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0146586_67	UniRef90	UniRef90_A0A8J7VJS5	Single-stranded DNA-binding protein	NA
UHGV-0146586_67	eggNOG-mapper	552398.HMPREF0866_02510	Single-stranded DNA-binding protein	NA
UHGV-0146586_67	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0146586_67	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0146586_67	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0146586_67	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0146586_67	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0146586_68	PHROG	phrog_4973	NA	unknown function
UHGV-0146586_68	UniRef90	UniRef90_UPI001D0904CC	helix-turn-helix domain-containing protein	NA
UHGV-0146586_68	eggNOG-mapper	1072685.IX83_07155	Helix-turn-helix domain	NA
UHGV-0146586_68	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0146586_68	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0146586_69	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0146586_69	UniRef90	UniRef90_A0A2Z4QA94	Recombination protein	NA
UHGV-0146586_69	eggNOG-mapper	445972.ANACOL_01826	HNH nucleases	NA
UHGV-0146586_69	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0146586_70	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0146586_70	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-0146586_70	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0146586_70	Structural annotation	PF05772	NA	NA
UHGV-0146586_71	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0146586_71	UniRef90	UniRef90_UPI001C126E67	ERF family protein	NA
UHGV-0146586_71	eggNOG-mapper	97138.C820_00777	ERF superfamily	NA
UHGV-0146586_71	Pfam	PF04404	ERF superfamily	ERF
UHGV-0146586_71	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0146586_72	PHROG	phrog_5070	NA	unknown function
UHGV-0146586_72	UniRef90	UniRef90_B0PAM0	Bacterial transferase hexapeptide repeat protein	NA
UHGV-0146586_72	eggNOG-mapper	445972.ANACOL_01820	COG NOG06285 non supervised orthologous group	NA
UHGV-0146586_72	Pfam	PF18836	YdcK Beta solenoid repeat	B_solenoid_ydck
UHGV-0146586_72	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0146586_72	Structural annotation	MF_01691, NF040481, COG2171	NA	NA
UHGV-0146586_73	Structural annotation	PF13560	NA	NA