UHGV-0147186

Genome information

Genome length 38,007 bps

CDS count 47

Completeness 94.55% (high-quality)

geNomad score 0.9786

Prediction confidence Confident

Genome information
Genome ID	UHGV-0147186
vOTU ID	vOTU-010462
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_425750
BioSample	SAMN05826634
Country	Estonia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.55% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9786
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	65.6
Jumbo phage	No

Genome content
Genome length	38,007 bps
GC content	31.44%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	47
CDS density	91.18%
Average CDS length	738.06 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0147186_1	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0147186_1	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0147186_1	UniRef90	UniRef90_A0A1C6H7R4	Helix-turn-helix domain	NA
UHGV-0147186_1	eggNOG-mapper	1487921.DP68_08675	NA	NA
UHGV-0147186_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0147186_1	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0147186_2	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0147186_2	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0147186_2	UniRef90	UniRef90_A0A1R5UMJ2	Rha family transcriptional regulator	NA
UHGV-0147186_2	eggNOG-mapper	1280692.AUJL01000009_gene2976	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0147186_2	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0147186_2	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0147186_2	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0147186_2	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0147186_2	Structural annotation	PF03374, PF09669, TIGR02681, COG3646	NA	NA
UHGV-0147186_3	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0147186_3	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0147186_3	UniRef90	UniRef90_UPI0010B22AEE	phage antirepressor KilAC domain-containing protein	NA
UHGV-0147186_3	eggNOG-mapper	1415775.U729_2580	BRO family, N-terminal domain	NA
UHGV-0147186_3	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0147186_3	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0147186_3	COG	COG3617	Prophage antirepressor	NA
UHGV-0147186_3	Structural annotation	PF02498, PF03374, TIGR02681, COG3617	NA	NA
UHGV-0147186_4	Structural annotation	PF12092	NA	NA
UHGV-0147186_5	PHROG	phrog_4370	excisionase	integration and excision
UHGV-0147186_5	UniRef90	UniRef90_A0A1I3QKH2	Helix-turn-helix domain-containing protein	NA
UHGV-0147186_6	Structural annotation	PF10922, NF007780	NA	NA
UHGV-0147186_8	Structural annotation	PF01765	NA	NA
UHGV-0147186_10	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0147186_10	UniRef90	UniRef90_W1XZM1	Homing nuclease	NA
UHGV-0147186_10	eggNOG-mapper	767806.D7PQ37_9CAUD	HNH endonuclease	NA
UHGV-0147186_10	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0147186_10	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0147186_10	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0147186_10	Structural annotation	PF07463, PF02796, TIGR04381, COG5606	NA	NA
UHGV-0147186_11	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0147186_11	UniRef90	UniRef90_UPI0018A93168	ERF family protein	NA
UHGV-0147186_11	eggNOG-mapper	929506.CbC4_1193	ERF superfamily	NA
UHGV-0147186_11	Pfam	PF04404	ERF superfamily	ERF
UHGV-0147186_11	Structural annotation	PF04404, TIGR00607, COG5055	NA	NA
UHGV-0147186_12	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-0147186_12	Pfam	PF07878	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
UHGV-0147186_12	Structural annotation	PF07878, TIGR04563, COG4877	NA	NA
UHGV-0147186_13	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0147186_13	UniRef90	UniRef90_UPI00068AA660	helix-turn-helix domain-containing protein	NA
UHGV-0147186_13	eggNOG-mapper	1408823.AXUS01000025_gene2662	DNA-binding transcription factor activity	NA
UHGV-0147186_13	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0147186_13	COG	COG0640	DNA-binding transcriptional regulator, ArsR family	NA
UHGV-0147186_13	Structural annotation	PF13730, MF_01909, NF040939, COG1846	NA	NA
UHGV-0147186_14	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0147186_14	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0147186_14	UniRef90	UniRef90_A0A5P3XF33	DNA helicase	NA
UHGV-0147186_14	eggNOG-mapper	272563.CD630_06260	DnaB-like helicase N terminal domain	NA
UHGV-0147186_14	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0147186_14	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0147186_14	COG	COG0305	Replicative DNA helicase	NA
UHGV-0147186_14	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0147186_16	PHROG	phrog_374	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0147186_16	UniRef90	UniRef90_A0A1C5YZ22	HTH_Tnp_Tc3_1 domain-containing protein	NA
UHGV-0147186_16	eggNOG-mapper	1125712.HMPREF1316_1499	NA	NA
UHGV-0147186_16	Structural annotation	PF02796, TIGR04381, COG2771	NA	NA
UHGV-0147186_17	Structural annotation	PF09889	NA	NA
UHGV-0147186_18	Structural annotation	PF18482	NA	NA
UHGV-0147186_19	PHROG	phrog_824	NA	unknown function
UHGV-0147186_19	UniRef90	UniRef90_A0A1C5YY75	VRR-NUC domain	NA
UHGV-0147186_19	eggNOG-mapper	397288.C806_00096	VRR_NUC	NA
UHGV-0147186_19	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0147186_19	Structural annotation	PF08774	NA	NA
UHGV-0147186_20	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0147186_20	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0147186_20	UniRef90	UniRef90_F8UBB2	3''-phosphoadenosine 5''-phosphosulfate sulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0147186_20	eggNOG-mapper	1345695.CLSA_c30150	NA	NA
UHGV-0147186_20	PADLOC	BrxP_00001	BrxP	BREX
UHGV-0147186_20	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0147186_20	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0147186_20	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA
UHGV-0147186_21	PHROG	phrog_7168	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0147186_21	UniRef90	UniRef90_UPI0014454113	GIY-YIG nuclease family protein	NA
UHGV-0147186_21	eggNOG-mapper	1476973.JMMB01000007_gene2015	GIY-YIG type nucleases (URI domain)	NA
UHGV-0147186_21	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-0147186_21	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0147186_21	Pfam	PF13936	Helix-turn-helix domain	HTH_38
UHGV-0147186_21	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-0147186_21	Structural annotation	PF19835, TIGR01453	NA	NA
UHGV-0147186_23	PHROG	phrog_98	NA	unknown function
UHGV-0147186_23	UniRef90	UniRef90_A0A1C5YXI2	YopX protein	NA
UHGV-0147186_23	eggNOG-mapper	556263.FSEG_00457	YopX protein	NA
UHGV-0147186_23	Pfam	PF09643	YopX protein	YopX
UHGV-0147186_23	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0147186_23	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0147186_24	PHROG	phrog_98	NA	unknown function
UHGV-0147186_24	UniRef90	UniRef90_UPI001F090E2F	YopX family protein	NA
UHGV-0147186_24	eggNOG-mapper	1095747.HMPREF1049_1359	YopX protein	NA
UHGV-0147186_24	Pfam	PF09643	YopX protein	YopX
UHGV-0147186_24	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0147186_24	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0147186_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0147186_26	UniRef90	UniRef90_A0A1C5YXD8	Phage transcriptional regulator, RinA family	NA
UHGV-0147186_26	eggNOG-mapper	1415774.U728_2924	sigma factor activity	NA
UHGV-0147186_26	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0147186_26	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0147186_26	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0147186_27	PHROG	phrog_9079	NA	unknown function
UHGV-0147186_27	eggNOG-mapper	1391646.AVSU01000053_gene947	NA	NA
UHGV-0147186_28	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0147186_28	UniRef90	UniRef90_A0A446I889	Terminase	NA
UHGV-0147186_28	eggNOG-mapper	1158609.I586_00076	Phage terminase small subunit	NA
UHGV-0147186_28	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0147186_28	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0147186_28	COG	COG5484	NA	NA
UHGV-0147186_28	Structural annotation	PF10668, PF02996, NF040601, COG5484	NA	NA
UHGV-0147186_29	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0147186_29	PHROG	phrog_10250	NA	unknown function
UHGV-0147186_29	UniRef90	UniRef90_A0A1C5YXC2	Phage terminase, large subunit, PBSX family	NA
UHGV-0147186_29	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0147186_29	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0147186_29	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0147186_29	COG	COG1783	Phage terminase large subunit	NA
UHGV-0147186_29	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0147186_30	PHROG	phrog_64	portal protein	head and packaging
UHGV-0147186_30	UniRef90	UniRef90_A0A1C5YX51	Phage portal protein, putative, A118 family	NA
UHGV-0147186_30	eggNOG-mapper	1443122.Z958_p0036	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0147186_30	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0147186_30	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0147186_31	PHROG	phrog_1657	head morphogenesis	head and packaging
UHGV-0147186_31	UniRef90	UniRef90_A0A1C5YWY9	Phage head morphogenesis protein, SPP1 gp7 family	NA
UHGV-0147186_31	eggNOG-mapper	1582149.A0A0A8WEF5_9CAUD	Phage Mu protein F like protein	NA
UHGV-0147186_31	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0147186_31	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0147186_32	PHROG	phrog_2657	transcriptional regulator	transcription regulation
UHGV-0147186_32	UniRef90	UniRef90_B0MAX6	Phage regulatory protein, Rha family	NA
UHGV-0147186_32	eggNOG-mapper	411490.ANACAC_00702	phage regulatory protein, rha family	NA
UHGV-0147186_32	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0147186_32	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0147186_32	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0147186_32	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0147186_33	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0147186_33	UniRef90	UniRef90_A0A1C5YXG1	Phage minor structural protein GP20	NA
UHGV-0147186_33	eggNOG-mapper	1033740.CAEW01000026_gene530	Phage minor structural protein GP20	NA
UHGV-0147186_33	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0147186_33	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0147186_34	PHROG	phrog_544	major head protein	head and packaging
UHGV-0147186_34	UniRef90	UniRef90_UPI000E5CD0B7	N4-gp56 family major capsid protein	NA
UHGV-0147186_34	eggNOG-mapper	411471.SUBVAR_06940	NA	NA
UHGV-0147186_34	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0147186_34	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0147186_35	PHROG	phrog_4020	NA	unknown function
UHGV-0147186_35	eggNOG-mapper	1121342.AUCO01000012_gene1692	NA	NA
UHGV-0147186_36	PHROG	phrog_8435	NA	unknown function
UHGV-0147186_36	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0147186_37	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0147186_37	UniRef90	UniRef90_A0A2H4J736	Putative tail component protein	NA
UHGV-0147186_37	eggNOG-mapper	559189.B6SBT4_9CAUD	NA	NA
UHGV-0147186_37	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0147186_38	PHROG	phrog_7585	NA	unknown function
UHGV-0147186_38	eggNOG-mapper	536232.CLM_3438	NA	NA
UHGV-0147186_38	Structural annotation	PF05657, COG5003	NA	NA
UHGV-0147186_39	PHROG	phrog_6686	tail tube protein	tail
UHGV-0147186_39	UniRef90	UniRef90_E7DNB3	Structural protein	NA
UHGV-0147186_39	eggNOG-mapper	871584.D9ZNE2_9CAUD	NA	NA
UHGV-0147186_39	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0147186_40	PHROG	phrog_6280	NA	unknown function
UHGV-0147186_40	UniRef90	UniRef90_UPI0005425395	esterase	NA
UHGV-0147186_40	eggNOG-mapper	1121342.AUCO01000012_gene1687	NA	NA
UHGV-0147186_41	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-0147186_41	UniRef90	UniRef90_A0A1C5YW53	Phage-related protein	NA
UHGV-0147186_41	eggNOG-mapper	1121091.AUMP01000032_gene3109	phage tail tape measure protein	NA
UHGV-0147186_41	COG	COG3953	SLT domain protein	NA
UHGV-0147186_41	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0147186_42	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0147186_42	UniRef90	UniRef90_A0A1C5YVW7	Phage-related protein	NA
UHGV-0147186_42	eggNOG-mapper	1582149.A0A0A8WHP7_9CAUD	Phage tail protein	NA
UHGV-0147186_42	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0147186_43	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0147186_43	PHROG	phrog_13289	tail protein	tail
UHGV-0147186_43	UniRef90	UniRef90_UPI0011CA3AC4	SH3 domain-containing protein	NA
UHGV-0147186_43	eggNOG-mapper	1151292.QEW_4523	Phage minor structural protein	NA
UHGV-0147186_43	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0147186_43	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0147186_43	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0147186_43	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0147186_43	COG	COG4733	Phage-related protein, tail protein J	NA
UHGV-0147186_43	Structural annotation	PF14594, PF08239, PF19081, PF13229, TIGR01665, NF040678, COG4926, COG4991, COG0791	NA	NA
UHGV-0147186_44	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0147186_44	eggNOG-mapper	86416.Clopa_0354	family 16	NA
UHGV-0147186_44	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0147186_44	Pfam	PF00722	Glycosyl hydrolases family 16	Glyco_hydro_16
UHGV-0147186_44	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0147186_44	COG	COG2273	Beta-glucanase, GH16 family	NA
UHGV-0147186_44	Structural annotation	PF03935, PF02368, PF10651, PF18998, PF21461, MF_04116, NF041449, NF007636, COG2273, COG3291, COG2372	NA	NA
UHGV-0147186_45	PHROG	phrog_1193	hemolysin	other
UHGV-0147186_45	UniRef90	UniRef90_UPI0018AB0AA6	hemolysin XhlA family protein	NA
UHGV-0147186_45	eggNOG-mapper	1415775.U729_2619	Haemolysin XhlA	NA
UHGV-0147186_45	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-0147186_46	UniRef90	UniRef90_UPI000983D253	phage holin	NA
UHGV-0147186_46	eggNOG-mapper	272626.lin1702	Bacteriophage holin	NA
UHGV-0147186_46	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0147186_46	COG	COG5546	NA	NA
UHGV-0147186_47	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0147186_47	PHROG	phrog_435	endolysin	lysis
UHGV-0147186_47	UniRef90	UniRef90_UPI001106ED5F	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0147186_47	eggNOG-mapper	445973.CLOBAR_01731	Ami_3	NA
UHGV-0147186_47	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0147186_47	Pfam	PF19087	NA	DUF5776
UHGV-0147186_47	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0147186_47	Structural annotation	PF01520, PF19087, TIGR02883, COG0860, COG4991	NA	NA